RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 SOX18P35713 384 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 PKDCCQ504Y2 493 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 KIAA0319Q5VV43 1072 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 CMTR1Q8N1G2 835 aaKnown RBP8.62□□□□□ -1.03
RBM39-227ENST00000470563 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 RNF34Q969K3 372 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 NDFIP2Q9NV92 336 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 TMEM63CQ9P1W3 806 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 FAM8A1Q9UBU6 413 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 FOXD3Q9UJU5 478 aaPredicted RBP8.62□□□□□ -1.03
RBM39-227ENST00000470563 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 PCDHGC4Q9Y5F7 938 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 A6NHS1 94 aa8.61□□□□□ -1.03
RBM39-227ENST00000470563 H7C1W4 665 aa8.61□□□□□ -1.03
RBM39-227ENST00000470563 ZNF76P36508 570 aa8.61□□□□□ -1.03
RBM39-227ENST00000470563 SLC43A3Q8NBI5 491 aa8.61□□□□□ -1.03
RBM39-227ENST00000470563 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
RBM39-227ENST00000470563 RNF19AQ9NV58 838 aa8.61□□□□□ -1.03
RBM39-227ENST00000470563 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 THBS1P07996 1170 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
RBM39-227ENST00000470563 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
RBM39-227ENST00000470563 FAM182BQ5T319 152 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
RBM39-227ENST00000470563 ZCCHC2Q9C0B9 1178 aaKnown RBP8.6□□□□□ -1.03
RBM39-227ENST00000470563 SUV39H2Q9H5I1 410 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 RUBCNLQ9H714 662 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 ATP13A2Q9NQ11 1180 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 NLRP2Q9NX02 1062 aa8.6□□□□□ -1.03
RBM39-227ENST00000470563 FIGNL2A6NMB9 653 aa8.59□□□□□ -1.03
RBM39-227ENST00000470563 ATXN7O15265 892 aaPredicted RBP8.59□□□□□ -1.03
RBM39-227ENST00000470563 PRPF40BQ6NWY9 871 aaKnown RBP8.59□□□□□ -1.03
RBM39-227ENST00000470563 OR13H1Q8NG92 308 aa8.59□□□□□ -1.03
RBM39-227ENST00000470563 KIFC2Q96AC6 838 aa8.59□□□□□ -1.03
RBM39-227ENST00000470563 GSX2Q9BZM3 304 aa8.59□□□□□ -1.03
RBM39-227ENST00000470563 KIF4AO95239 1232 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 TNP2Q05952 138 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 CCINQ13939 588 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
RBM39-227ENST00000470563 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 OSBPL7Q9BZF2 842 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
RBM39-227ENST00000470563 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
RBM39-227ENST00000470563 EDN3P14138 238 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 USPL1Q5W0Q7 1092 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 NT5DC4Q86YG4 428 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 GPAMQ9HCL2 828 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 SALL4Q9UJQ4 1053 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
RBM39-227ENST00000470563 MAN1A2O60476 641 aa8.56□□□□□ -1.04
RBM39-227ENST00000470563 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
RBM39-227ENST00000470563 TTC39BQ5VTQ0 682 aaPredicted RBP8.56□□□□□ -1.04
RBM39-227ENST00000470563 C1orf127Q8N9H9 656 aa8.56□□□□□ -1.04
RBM39-227ENST00000470563 EPS8L3Q8TE67 593 aaKnown RBP8.56□□□□□ -1.04
RBM39-227ENST00000470563 DRC1Q96MC2 740 aa8.56□□□□□ -1.04
RBM39-227ENST00000470563 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
RBM39-227ENST00000470563 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
RBM39-227ENST00000470563 PPM1HQ9ULR3 514 aa8.56□□□□□ -1.04
RBM39-227ENST00000470563 EREGO14944 169 aa8.55□□□□□ -1.04
RBM39-227ENST00000470563 GFRA3O60609 400 aa8.55□□□□□ -1.04
RBM39-227ENST00000470563 PTSQ03393 145 aa8.55□□□□□ -1.04
RBM39-227ENST00000470563 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
RBM39-227ENST00000470563 TINF2Q9BSI4 451 aa8.55□□□□□ -1.04
RBM39-227ENST00000470563 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
RBM39-227ENST00000470563 ZFYVE1Q9HBF4 777 aa8.55□□□□□ -1.04
RBM39-227ENST00000470563 NPHS2Q9NP85 383 aa8.55□□□□□ -1.04
RBM39-227ENST00000470563 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
RBM39-227ENST00000470563 CES1P23141 567 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 GSTT1P30711 240 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 GLIS3Q8NEA6 775 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 ARMC5Q96C12 935 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 TRIM47Q96LD4 638 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 GMLQ99445 158 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 GAS2L1Q99501 681 aaPredicted RBP8.54□□□□□ -1.04
RBM39-227ENST00000470563 BCO2Q9BYV7 579 aa8.54□□□□□ -1.04
RBM39-227ENST00000470563 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
RBM39-227ENST00000470563 MAPTP10636 758 aaKnown RBP8.53□□□□□ -1.04
RBM39-227ENST00000470563 IRS1P35568 1242 aa8.53□□□□□ -1.04
RBM39-227ENST00000470563 SFSWAPQ12872 951 aaKnown RBP8.53□□□□□ -1.04
RBM39-227ENST00000470563 GRM2Q14416 872 aa8.53□□□□□ -1.04
RBM39-227ENST00000470563 ERMP1Q7Z2K6 904 aa8.53□□□□□ -1.04
RBM39-227ENST00000470563 MARK1Q9P0L2 795 aa8.53□□□□□ -1.04
RBM39-227ENST00000470563 NRLP54845 237 aa8.52□□□□□ -1.05
RBM39-227ENST00000470563 PEAR1Q5VY43 1037 aaPredicted RBP8.52□□□□□ -1.05
RBM39-227ENST00000470563 PI16Q6UXB8 463 aa8.52□□□□□ -1.05
RBM39-227ENST00000470563 HS2ST1Q7LGA3 356 aa8.52□□□□□ -1.05
RBM39-227ENST00000470563 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
RBM39-227ENST00000470563 C3orf58Q8NDZ4 430 aa8.52□□□□□ -1.05
RBM39-227ENST00000470563 UBXN4Q92575 508 aa8.52□□□□□ -1.05
RBM39-227ENST00000470563 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
RBM39-227ENST00000470563 A0A1W2PP55 124 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 BNIP3LO60238 219 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 MMP20O60882 483 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 DBN1Q16643 649 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 ZNF654Q8IZM8 581 aa8.51□□□□□ -1.05
RBM39-227ENST00000470563 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms