RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 COL4A5P29400 1685 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 BBOX1O75936 387 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 DPP8Q6V1X1 898 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 MPNDQ8N594 471 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 NGEFQ8N5V2 710 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 RTFDC1Q9BY42 306 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 GBA2Q9HCG7 927 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 RNF186Q9NXI6 227 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 RIC1Q4ADV7 1423 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
SYNGAP1-205ENST00000470232 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
SYNGAP1-205ENST00000470232 RAD17O75943 681 aa11.83□□□□□ -0.52
SYNGAP1-205ENST00000470232 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
SYNGAP1-205ENST00000470232 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
SYNGAP1-205ENST00000470232 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 AKAP11Q9UKA4 1901 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 FAM155AB1AL88 458 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 GPTP24298 496 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 TAF7Q15545 349 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 KRT26Q7Z3Y9 468 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 SP8Q8IXZ3 490 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 DPF2Q92785 391 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 HDAC9Q9UKV0 1011 aa11.82□□□□□ -0.52
SYNGAP1-205ENST00000470232 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 MCM10Q7L590 875 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-205ENST00000470232 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
SYNGAP1-205ENST00000470232 PNISRQ8TF01 805 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-205ENST00000470232 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
SYNGAP1-205ENST00000470232 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
SYNGAP1-205ENST00000470232 NUP98P52948 1817 aa11.8□□□□□ -0.52
SYNGAP1-205ENST00000470232 NTSR2O95665 410 aa11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 GIGYF2Q6Y7W6 1299 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 TMC4Q7Z404 712 aa11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 MIER1Q8N108 512 aa11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 ZBTB3Q9H5J0 574 aa11.79□□□□□ -0.52
SYNGAP1-205ENST00000470232 SLC10A3P09131 477 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 MYL6BP14649 208 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 RPS12P25398 132 aaKnown RBP11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 TTLL7Q6ZT98 887 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 ABCC4O15439 1325 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
SYNGAP1-205ENST00000470232 PER1O15534 1290 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-205ENST00000470232 NEFMP07197 916 aa11.77□□□□□ -0.53
SYNGAP1-205ENST00000470232 WASHC4Q2M389 1173 aa11.77□□□□□ -0.53
SYNGAP1-205ENST00000470232 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.53
SYNGAP1-205ENST00000470232 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-205ENST00000470232 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
SYNGAP1-205ENST00000470232 POLR2AP24928 1970 aaKnown RBP11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 PSMD14O00487 310 aa11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 FKBP1BP68106 108 aa11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 GRAPQ13588 217 aa11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 ZBTB12Q9Y330 459 aaPredicted RBP11.76□□□□□ -0.53
SYNGAP1-205ENST00000470232 YDJCA8MPS7 323 aa11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 HABP4Q5JVS0 413 aaKnown RBP11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 ERBB4Q15303 1308 aa11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 COL3A1P02461 1466 aaPredicted RBP11.75□□□□□ -0.53
SYNGAP1-205ENST00000470232 SHTN1A0MZ66 631 aa11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 ADM5C9JUS6 153 aa11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 POLA2Q14181 598 aa11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 DLK2Q6UY11 383 aa11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 SLC51AQ86UW1 340 aa11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 ZNF296Q8WUU4 475 aaPredicted RBP11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 EYA3Q99504 573 aa11.74□□□□□ -0.53
SYNGAP1-205ENST00000470232 G3V3G9 751 aa11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 NOM1Q5C9Z4 860 aaKnown RBP11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
SYNGAP1-205ENST00000470232 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms