RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 NUDT8Q8WV74 236 aa10.98□□□□□ -0.65
COL11A1-208ENST00000470170 COL26A1Q96A83 441 aa10.98□□□□□ -0.65
COL11A1-208ENST00000470170 FAM229AH3BQW9 127 aa10.97□□□□□ -0.65
COL11A1-208ENST00000470170 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
COL11A1-208ENST00000470170 CMTR1Q8N1G2 835 aaKnown RBP10.97□□□□□ -0.65
COL11A1-208ENST00000470170 JPH1Q9HDC5 661 aaPredicted RBP10.97□□□□□ -0.65
COL11A1-208ENST00000470170 LILRB5O75023 590 aa10.96□□□□□ -0.65
COL11A1-208ENST00000470170 SPATA31C1P0DKV0 1188 aa10.96□□□□□ -0.65
COL11A1-208ENST00000470170 RARAP10276 462 aa10.96□□□□□ -0.65
COL11A1-208ENST00000470170 SPDYE3A6NKU9 549 aa10.95□□□□□ -0.66
COL11A1-208ENST00000470170 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
COL11A1-208ENST00000470170 MAP3K6O95382 1288 aa10.95□□□□□ -0.66
COL11A1-208ENST00000470170 PSAPL1Q6NUJ1 521 aa10.95□□□□□ -0.66
COL11A1-208ENST00000470170 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
COL11A1-208ENST00000470170 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
COL11A1-208ENST00000470170 XYLBO75191 536 aa10.94□□□□□ -0.66
COL11A1-208ENST00000470170 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
COL11A1-208ENST00000470170 BRD2P25440 801 aaKnown RBP10.94□□□□□ -0.66
COL11A1-208ENST00000470170 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
COL11A1-208ENST00000470170 FAM35AQ86V20 835 aa10.94□□□□□ -0.66
COL11A1-208ENST00000470170 C11orf16Q9NQ32 467 aa10.94□□□□□ -0.66
COL11A1-208ENST00000470170 KCNMB2Q9Y691 235 aa10.94□□□□□ -0.66
COL11A1-208ENST00000470170 ZBTB42B2RXF5 422 aa10.93□□□□□ -0.66
COL11A1-208ENST00000470170 CPB1P15086 417 aa10.93□□□□□ -0.66
COL11A1-208ENST00000470170 PRRT3Q5FWE3 981 aa10.93□□□□□ -0.66
COL11A1-208ENST00000470170 EGFRP00533 1210 aa10.92□□□□□ -0.66
COL11A1-208ENST00000470170 BAG6P46379 1132 aa10.92□□□□□ -0.66
COL11A1-208ENST00000470170 AFF1P51825 1210 aaKnown RBP10.91□□□□□ -0.66
COL11A1-208ENST00000470170 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
COL11A1-208ENST00000470170 TRPM4Q8TD43 1214 aa10.91□□□□□ -0.66
COL11A1-208ENST00000470170 RGS9O75916 674 aaPredicted RBP10.9□□□□□ -0.66
COL11A1-208ENST00000470170 GPLD1P80108 840 aa10.9□□□□□ -0.66
COL11A1-208ENST00000470170 TRIM28Q13263 835 aaKnown RBP10.9□□□□□ -0.66
COL11A1-208ENST00000470170 TRIP4Q15650 581 aaPredicted RBP10.9□□□□□ -0.66
COL11A1-208ENST00000470170 PCSK7Q16549 785 aa10.9□□□□□ -0.66
COL11A1-208ENST00000470170 SEPT3Q9UH03 358 aa10.9□□□□□ -0.66
COL11A1-208ENST00000470170 PERM1Q5SV97 790 aa10.89□□□□□ -0.67
COL11A1-208ENST00000470170 HFE2Q6ZVN8 426 aa10.89□□□□□ -0.67
COL11A1-208ENST00000470170 LPIN3Q9BQK8 851 aa10.89□□□□□ -0.67
COL11A1-208ENST00000470170 SCNN1AP37088 669 aa10.88□□□□□ -0.67
COL11A1-208ENST00000470170 PLAURQ03405 335 aa10.88□□□□□ -0.67
COL11A1-208ENST00000470170 GRIK4Q16099 956 aa10.88□□□□□ -0.67
COL11A1-208ENST00000470170 TLR7Q9NYK1 1049 aaKnown RBP10.88□□□□□ -0.67
COL11A1-208ENST00000470170 ZBTB39O15060 712 aa10.87□□□□□ -0.67
COL11A1-208ENST00000470170 MMP20O60882 483 aa10.87□□□□□ -0.67
COL11A1-208ENST00000470170 ZAP70P43403 619 aa10.87□□□□□ -0.67
COL11A1-208ENST00000470170 STIM2Q9P246 746 aa10.87□□□□□ -0.67
COL11A1-208ENST00000470170 A0A0A0MRY4 1105 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 TMEM88BA6NKF7 163 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 ADAM23O75077 832 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 APBA3O96018 575 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 FURINP09958 794 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 NRLP54845 237 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 ELMSAN1Q6PJG2 1045 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 FRRS1LQ9P0K9 344 aa10.86□□□□□ -0.67
COL11A1-208ENST00000470170 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
COL11A1-208ENST00000470170 EIF2AK2P19525 551 aaKnown RBP10.85□□□□□ -0.67
COL11A1-208ENST00000470170 DMRTC2Q8IXT2 367 aaPredicted RBP10.85□□□□□ -0.67
COL11A1-208ENST00000470170 PIK3R5Q8WYR1 880 aa10.85□□□□□ -0.67
COL11A1-208ENST00000470170 NSUN5Q96P11 429 aaKnown RBP10.85□□□□□ -0.67
COL11A1-208ENST00000470170 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
COL11A1-208ENST00000470170 PSAPP07602 524 aa10.84□□□□□ -0.67
COL11A1-208ENST00000470170 ARID4AP29374 1257 aaPredicted RBP10.84□□□□□ -0.67
COL11A1-208ENST00000470170 GRIK5Q16478 980 aa10.84□□□□□ -0.67
COL11A1-208ENST00000470170 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
COL11A1-208ENST00000470170 GPR152Q8TDT2 470 aa10.84□□□□□ -0.67
COL11A1-208ENST00000470170 SMG9Q9H0W8 520 aaKnown RBP10.84□□□□□ -0.67
COL11A1-208ENST00000470170 J3QW42 95 aa10.83□□□□□ -0.68
COL11A1-208ENST00000470170 GATA4P43694 442 aa10.83□□□□□ -0.68
COL11A1-208ENST00000470170 ABTB2Q8N961 1025 aa10.83□□□□□ -0.68
COL11A1-208ENST00000470170 FAM13BQ9NYF5 915 aa10.83□□□□□ -0.68
COL11A1-208ENST00000470170 CARNS1A5YM72 827 aa10.82□□□□□ -0.68
COL11A1-208ENST00000470170 K7ELQ4 463 aaPredicted RBP10.82□□□□□ -0.68
COL11A1-208ENST00000470170 RAC1P63000 192 aa10.82□□□□□ -0.68
COL11A1-208ENST00000470170 DOC2BQ14184 412 aa10.82□□□□□ -0.68
COL11A1-208ENST00000470170 MSL1Q68DK7 614 aa10.82□□□□□ -0.68
COL11A1-208ENST00000470170 LOC102724428A0A0B4J2F2 783 aa10.81□□□□□ -0.68
COL11A1-208ENST00000470170 ELNP15502 786 aa10.81□□□□□ -0.68
COL11A1-208ENST00000470170 SIK1P57059 783 aa10.81□□□□□ -0.68
COL11A1-208ENST00000470170 ILDR2Q71H61 639 aa10.81□□□□□ -0.68
COL11A1-208ENST00000470170 ATCAYQ86WG3 371 aa10.81□□□□□ -0.68
COL11A1-208ENST00000470170 NACC1Q96RE7 527 aa10.81□□□□□ -0.68
COL11A1-208ENST00000470170 SOX18P35713 384 aa10.8□□□□□ -0.68
COL11A1-208ENST00000470170 SHISA2Q6UWI4 295 aa10.8□□□□□ -0.68
COL11A1-208ENST00000470170 FMR1NBQ8N0W7 255 aaPredicted RBP10.8□□□□□ -0.68
COL11A1-208ENST00000470170 SELPP16109 830 aa10.79□□□□□ -0.68
COL11A1-208ENST00000470170 SSFA2P28290 1259 aa10.79□□□□□ -0.68
COL11A1-208ENST00000470170 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
COL11A1-208ENST00000470170 TTC9Q92623 222 aa10.79□□□□□ -0.68
COL11A1-208ENST00000470170 PLD4Q96BZ4 506 aa10.79□□□□□ -0.68
COL11A1-208ENST00000470170 LOC100996750A0A140TA64 210 aa10.78□□□□□ -0.68
COL11A1-208ENST00000470170 GHRHP01286 108 aa10.78□□□□□ -0.68
COL11A1-208ENST00000470170 HOXD8P13378 290 aaPredicted RBP10.78□□□□□ -0.68
COL11A1-208ENST00000470170 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
COL11A1-208ENST00000470170 KRTAP4-6Q9BYQ5 205 aa10.78□□□□□ -0.68
COL11A1-208ENST00000470170 FNDC3AQ9Y2H6 1198 aaKnown RBP10.78□□□□□ -0.68
COL11A1-208ENST00000470170 OR13H1Q8NG92 308 aa10.77□□□□□ -0.69
COL11A1-208ENST00000470170 GTF3C2Q8WUA4 911 aaPredicted RBP10.77□□□□□ -0.69
COL11A1-208ENST00000470170 NUDT16Q96DE0 195 aaKnown RBP10.77□□□□□ -0.69
COL11A1-208ENST00000470170 C9orf172C9J069 976 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms