RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 WWC3Q9ULE0 1092 aa7.02□□□□□ -1.29
VPS8-220ENST00000469713 ATXN7L1Q9ULK2 861 aaPredicted RBP7.02□□□□□ -1.29
VPS8-220ENST00000469713 LDHBP07195 334 aaKnown RBP7.01□□□□□ -1.29
VPS8-220ENST00000469713 CCINQ13939 588 aa7.01□□□□□ -1.29
VPS8-220ENST00000469713 ENOX2Q16206 610 aaKnown RBP7.01□□□□□ -1.29
VPS8-220ENST00000469713 SV2AQ7L0J3 742 aa7.01□□□□□ -1.29
VPS8-220ENST00000469713 NLRP13Q86W25 1043 aa7.01□□□□□ -1.29
VPS8-220ENST00000469713 CSRNP1Q96S65 589 aa7.01□□□□□ -1.29
VPS8-220ENST00000469713 SLC30A3Q99726 388 aa7.01□□□□□ -1.29
VPS8-220ENST00000469713 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
VPS8-220ENST00000469713 FGFR3P22607 806 aa7□□□□□ -1.29
VPS8-220ENST00000469713 SPEM2Q0P670 501 aa7□□□□□ -1.29
VPS8-220ENST00000469713 ZNF326Q5BKZ1 582 aaKnown RBP7□□□□□ -1.29
VPS8-220ENST00000469713 USPL1Q5W0Q7 1092 aa7□□□□□ -1.29
VPS8-220ENST00000469713 RAB44Q7Z6P3 723 aaPredicted RBP7□□□□□ -1.29
VPS8-220ENST00000469713 SNX29Q8TEQ0 813 aa7□□□□□ -1.29
VPS8-220ENST00000469713 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
VPS8-220ENST00000469713 TRERF1Q96PN7 1200 aa7□□□□□ -1.29
VPS8-220ENST00000469713 CFHR5Q9BXR6 569 aa7□□□□□ -1.29
VPS8-220ENST00000469713 C11orf16Q9NQ32 467 aa7□□□□□ -1.29
VPS8-220ENST00000469713 ZFATQ9P243 1243 aa7□□□□□ -1.29
VPS8-220ENST00000469713 PHF24Q9UPV7 400 aa7□□□□□ -1.29
VPS8-220ENST00000469713 PHACTR2O75167 634 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 NEFLP07196 543 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 TARSP26639 723 aaKnown RBP6.99□□□□□ -1.29
VPS8-220ENST00000469713 CTBSQ01459 385 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 FOXR1Q6PIV2 292 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 C1orf127Q8N9H9 656 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 CHRDQ9H2X0 955 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 ABI2Q9NYB9 513 aaPredicted RBP6.99□□□□□ -1.29
VPS8-220ENST00000469713 CNTN3Q9P232 1028 aa6.99□□□□□ -1.29
VPS8-220ENST00000469713 NXF1Q9UBU9 619 aaKnown RBP6.99□□□□□ -1.29
VPS8-220ENST00000469713 CPNE3O75131 537 aaKnown RBP6.98□□□□□ -1.29
VPS8-220ENST00000469713 NFKB1P19838 968 aa6.98□□□□□ -1.29
VPS8-220ENST00000469713 ATP2B2Q01814 1243 aa6.98□□□□□ -1.29
VPS8-220ENST00000469713 TTC39BQ5VTQ0 682 aaPredicted RBP6.98□□□□□ -1.29
VPS8-220ENST00000469713 BHMTQ93088 406 aa6.98□□□□□ -1.29
VPS8-220ENST00000469713 PNMA5Q96PV4 448 aa6.98□□□□□ -1.29
VPS8-220ENST00000469713 ZFYVE28Q9HCC9 887 aa6.98□□□□□ -1.29
VPS8-220ENST00000469713 RNF19AQ9NV58 838 aa6.98□□□□□ -1.29
VPS8-220ENST00000469713 EREGO14944 169 aa6.97□□□□□ -1.29
VPS8-220ENST00000469713 MMP20O60882 483 aa6.97□□□□□ -1.29
VPS8-220ENST00000469713 PRPF40AO75400 957 aaKnown RBP6.97□□□□□ -1.29
VPS8-220ENST00000469713 CYP2E1P05181 493 aaPredicted RBP6.97□□□□□ -1.29
VPS8-220ENST00000469713 POLR3DP05423 398 aaPredicted RBP6.97□□□□□ -1.29
VPS8-220ENST00000469713 RARAP10276 462 aa6.97□□□□□ -1.29
VPS8-220ENST00000469713 FAM182BQ5T319 152 aa6.97□□□□□ -1.29
VPS8-220ENST00000469713 GPR161Q8N6U8 529 aaKnown RBP6.97□□□□□ -1.29
VPS8-220ENST00000469713 DUSP9Q99956 384 aaKnown RBP6.97□□□□□ -1.29
VPS8-220ENST00000469713 DNAJC25Q9H1X3 360 aa6.97□□□□□ -1.29
VPS8-220ENST00000469713 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.97□□□□□ -1.29
VPS8-220ENST00000469713 H3BM21 787 aa6.96□□□□□ -1.3
VPS8-220ENST00000469713 C2CD2LO14523 706 aa6.96□□□□□ -1.3
VPS8-220ENST00000469713 GAS6Q14393 721 aa6.96□□□□□ -1.3
VPS8-220ENST00000469713 ALG1LQ6GMV1 187 aa6.96□□□□□ -1.3
VPS8-220ENST00000469713 SLC16A10Q8TF71 515 aa6.96□□□□□ -1.3
VPS8-220ENST00000469713 MRRFQ96E11 262 aaKnown RBP6.96□□□□□ -1.3
VPS8-220ENST00000469713 KIAA1522Q9P206 1035 aaPredicted RBP6.96□□□□□ -1.3
VPS8-220ENST00000469713 PARP2Q9UGN5 583 aa6.96□□□□□ -1.3
VPS8-220ENST00000469713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.96□□□□□ -1.3
VPS8-220ENST00000469713 E9PSI1 815 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 CES1P23141 567 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 IRS1P35568 1242 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 GMPRP36959 345 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 OR13H1Q8NG92 308 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 CCDC74AQ96AQ1 378 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 FAM161BQ96MY7 647 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 ERBB4Q15303 1308 aa6.95□□□□□ -1.3
VPS8-220ENST00000469713 MAP3K6O95382 1288 aa6.94□□□□□ -1.3
VPS8-220ENST00000469713 BMP4P12644 408 aa6.94□□□□□ -1.3
VPS8-220ENST00000469713 FGD1P98174 961 aa6.94□□□□□ -1.3
VPS8-220ENST00000469713 XPCQ01831 940 aaPredicted RBP6.94□□□□□ -1.3
VPS8-220ENST00000469713 PI16Q6UXB8 463 aa6.94□□□□□ -1.3
VPS8-220ENST00000469713 EPS8L3Q8TE67 593 aaKnown RBP6.94□□□□□ -1.3
VPS8-220ENST00000469713 FBF1Q8TES7 1133 aa6.94□□□□□ -1.3
VPS8-220ENST00000469713 TLR7Q9NYK1 1049 aaKnown RBP6.94□□□□□ -1.3
VPS8-220ENST00000469713 PRR12Q9ULL5 1215 aa6.94□□□□□ -1.3
VPS8-220ENST00000469713 PSAPP07602 524 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 MX2P20592 715 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS8-220ENST00000469713 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
VPS8-220ENST00000469713 SYT9Q86SS6 491 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 GALNT12Q8IXK2 581 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 IRF7Q92985 503 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
VPS8-220ENST00000469713 FAM181BA6NEQ2 426 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 DAB2P98082 770 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 PSMD2Q13200 908 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 NEUROD1Q13562 356 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 ZNF468Q5VIY5 522 aaPredicted RBP6.92□□□□□ -1.3
VPS8-220ENST00000469713 DHX32Q7L7V1 743 aaKnown RBP6.92□□□□□ -1.3
VPS8-220ENST00000469713 PMEPA1Q969W9 287 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
VPS8-220ENST00000469713 LATS2Q9NRM7 1088 aa6.92□□□□□ -1.3
VPS8-220ENST00000469713 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
VPS8-220ENST00000469713 GNA15P30679 374 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms