RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SHANK3Q9BYB0 1731 aa17.6■□□□□ 0.41
CBWD3-205ENST00000469687 CHMP3Q9Y3E7 222 aa17.6■□□□□ 0.41
CBWD3-205ENST00000469687 COL5A2P05997 1499 aaPredicted RBP17.6■□□□□ 0.41
CBWD3-205ENST00000469687 TJP1Q07157 1748 aa17.6■□□□□ 0.41
CBWD3-205ENST00000469687 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
CBWD3-205ENST00000469687 ATP5JP18859 108 aa17.59■□□□□ 0.41
CBWD3-205ENST00000469687 FOXO4P98177 505 aa17.59■□□□□ 0.41
CBWD3-205ENST00000469687 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
CBWD3-205ENST00000469687 F13A1P00488 732 aa17.59■□□□□ 0.41
CBWD3-205ENST00000469687 CCDC129Q6ZRS4 1044 aa17.58■□□□□ 0.4
CBWD3-205ENST00000469687 SEC62Q99442 399 aaKnown RBP17.58■□□□□ 0.4
CBWD3-205ENST00000469687 ZBTB3Q9H5J0 574 aa17.58■□□□□ 0.4
CBWD3-205ENST00000469687 H7C1W4 665 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 TAF5LO75529 589 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 RNF214Q8ND24 703 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
CBWD3-205ENST00000469687 JCADQ9P266 1359 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 ZNF609O15014 1411 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
CBWD3-205ENST00000469687 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-205ENST00000469687 SH2B1Q9NRF2 756 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-205ENST00000469687 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 MTMR6Q9Y217 621 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 ABCA3Q99758 1704 aa17.57■□□□□ 0.4
CBWD3-205ENST00000469687 SLFNL1Q499Z3 407 aa17.56■□□□□ 0.4
CBWD3-205ENST00000469687 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-205ENST00000469687 FIBPO43427 364 aa17.56■□□□□ 0.4
CBWD3-205ENST00000469687 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
CBWD3-205ENST00000469687 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
CBWD3-205ENST00000469687 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 IL2RBP14784 551 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 ZNF594Q96JF6 807 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-205ENST00000469687 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-205ENST00000469687 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 PSMA5P28066 241 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-205ENST00000469687 HAUS7Q99871 368 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
CBWD3-205ENST00000469687 DNM1Q05193 864 aaKnown RBP17.54■□□□□ 0.4
CBWD3-205ENST00000469687 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
CBWD3-205ENST00000469687 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
CBWD3-205ENST00000469687 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
CBWD3-205ENST00000469687 VPS37CA5D8V6 355 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-205ENST00000469687 TIMM10P62072 90 aa17.53■□□□□ 0.4
CBWD3-205ENST00000469687 LRRC24Q50LG9 513 aa17.53■□□□□ 0.4
CBWD3-205ENST00000469687 PDLIM2Q96JY6 352 aa17.53■□□□□ 0.4
CBWD3-205ENST00000469687 NEUROD6Q96NK8 337 aa17.53■□□□□ 0.4
CBWD3-205ENST00000469687 CARD10Q9BWT7 1032 aa17.53■□□□□ 0.4
CBWD3-205ENST00000469687 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
CBWD3-205ENST00000469687 STK3Q13188 491 aa17.52■□□□□ 0.4
CBWD3-205ENST00000469687 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
CBWD3-205ENST00000469687 SYAP1Q96A49 352 aaPredicted RBP17.52■□□□□ 0.39
CBWD3-205ENST00000469687 TSPY26PQ9H489 355 aa17.52■□□□□ 0.39
CBWD3-205ENST00000469687 ZNF330Q9Y3S2 320 aaPredicted RBP17.52■□□□□ 0.39
CBWD3-205ENST00000469687 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
CBWD3-205ENST00000469687 TSGA10IPQ3SY00 556 aa17.51■□□□□ 0.39
CBWD3-205ENST00000469687 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
CBWD3-205ENST00000469687 PUS3Q9BZE2 481 aaKnown RBP17.51■□□□□ 0.39
CBWD3-205ENST00000469687 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
CBWD3-205ENST00000469687 LAMA4Q16363 1823 aa17.51■□□□□ 0.39
CBWD3-205ENST00000469687 GOLIM4O00461 696 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 CYP21A2P08686 494 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 UBE2HP62256 183 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 MCMDC2Q4G0Z9 681 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
CBWD3-205ENST00000469687 FAM173BQ6P4H8 233 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 KBTBD3Q8NAB2 608 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 CCDC191Q8NCU4 936 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
CBWD3-205ENST00000469687 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
CBWD3-205ENST00000469687 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
CBWD3-205ENST00000469687 EVA1CP58658 441 aa17.49■□□□□ 0.39
CBWD3-205ENST00000469687 ZSCAN30Q86W11 494 aa17.49■□□□□ 0.39
CBWD3-205ENST00000469687 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
CBWD3-205ENST00000469687 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
CBWD3-205ENST00000469687 STOX1Q6ZVD7 989 aa17.48■□□□□ 0.39
CBWD3-205ENST00000469687 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
CBWD3-205ENST00000469687 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
CBWD3-205ENST00000469687 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
CBWD3-205ENST00000469687 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 EYA2O00167 538 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 IL15P40933 162 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-205ENST00000469687 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 ALDH8A1Q9H2A2 487 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-205ENST00000469687 ASAP1Q9ULH1 1129 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 A0A1B0GUL7 405 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 PHF14O94880 888 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-205ENST00000469687 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
CBWD3-205ENST00000469687 SH3TC1Q8TE82 1336 aa17.46■□□□□ 0.39
CBWD3-205ENST00000469687 JAK2O60674 1132 aa17.46■□□□□ 0.39
CBWD3-205ENST00000469687 ISCA1Q9BUE6 129 aa17.46■□□□□ 0.39
CBWD3-205ENST00000469687 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.46■□□□□ 0.39
CBWD3-205ENST00000469687 Q6ZUG5 572 aa17.46■□□□□ 0.39
CBWD3-205ENST00000469687 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms