RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 DGKZQ13574 1117 aa24.14■■□□□ 1.45
TTC28-205ENST00000469670 TNIP1Q15025 636 aa24.14■■□□□ 1.45
TTC28-205ENST00000469670 CDC37L1Q7L3B6 337 aa24.14■■□□□ 1.45
TTC28-205ENST00000469670 MPNDQ8N594 471 aa24.14■■□□□ 1.45
TTC28-205ENST00000469670 BBOX1O75936 387 aa24.13■■□□□ 1.45
TTC28-205ENST00000469670 SP8Q8IXZ3 490 aa24.13■■□□□ 1.45
TTC28-205ENST00000469670 TRPM4Q8TD43 1214 aa24.13■■□□□ 1.45
TTC28-205ENST00000469670 THUMPD2Q9BTF0 503 aaKnown RBP24.13■■□□□ 1.45
TTC28-205ENST00000469670 NOGQ13253 232 aa24.11■■□□□ 1.45
TTC28-205ENST00000469670 PCDH10Q9P2E7 1040 aa24.11■■□□□ 1.45
TTC28-205ENST00000469670 CNOT7Q9UIV1 285 aaKnown RBP24.11■■□□□ 1.45
TTC28-205ENST00000469670 LRP10Q7Z4F1 713 aa24.1■■□□□ 1.45
TTC28-205ENST00000469670 ZIC5Q96T25 663 aa24.1■■□□□ 1.45
TTC28-205ENST00000469670 SHTN1A0MZ66 631 aa24.09■■□□□ 1.45
TTC28-205ENST00000469670 HUNKP57058 714 aa24.09■■□□□ 1.45
TTC28-205ENST00000469670 NFE2L2Q16236 605 aa24.09■■□□□ 1.45
TTC28-205ENST00000469670 USP48Q86UV5 1035 aa24.09■■□□□ 1.45
TTC28-205ENST00000469670 H7C1D1 291 aa24.08■■□□□ 1.45
TTC28-205ENST00000469670 PDIA6Q15084 440 aa24.08■■□□□ 1.45
TTC28-205ENST00000469670 PLEKHF1Q96S99 279 aa24.08■■□□□ 1.45
TTC28-205ENST00000469670 YDJCA8MPS7 323 aa24.07■■□□□ 1.44
TTC28-205ENST00000469670 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
TTC28-205ENST00000469670 EIF2S2P20042 333 aaKnown RBP24.07■■□□□ 1.44
TTC28-205ENST00000469670 DDX46Q7L014 1031 aaKnown RBP24.07■■□□□ 1.44
TTC28-205ENST00000469670 MICALL2Q8IY33 904 aa24.07■■□□□ 1.44
TTC28-205ENST00000469670 CASP8AP2Q9UKL3 1982 aa24.07■■□□□ 1.44
TTC28-205ENST00000469670 GRAPQ13588 217 aa24.06■■□□□ 1.44
TTC28-205ENST00000469670 GRAPLQ8TC17 118 aaPredicted RBP24.06■■□□□ 1.44
TTC28-205ENST00000469670 ANXA1P04083 346 aa24.05■■□□□ 1.44
TTC28-205ENST00000469670 PROSER3Q2NL68 480 aa24.05■■□□□ 1.44
TTC28-205ENST00000469670 DLK2Q6UY11 383 aa24.05■■□□□ 1.44
TTC28-205ENST00000469670 NLRP10Q86W26 655 aa24.05■■□□□ 1.44
TTC28-205ENST00000469670 TSPYL4Q9UJ04 414 aa24.05■■□□□ 1.44
TTC28-205ENST00000469670 ZBTB12Q9Y330 459 aaPredicted RBP24.05■■□□□ 1.44
TTC28-205ENST00000469670 HSP90AB3PQ58FF7 597 aa24.04■■□□□ 1.44
TTC28-205ENST00000469670 DPF2Q92785 391 aa24.04■■□□□ 1.44
TTC28-205ENST00000469670 RGMBQ6NW40 437 aa24.03■■□□□ 1.44
TTC28-205ENST00000469670 SAMD7Q7Z3H4 446 aa24.03■■□□□ 1.44
TTC28-205ENST00000469670 TRMT112Q9UI30 125 aaKnown RBP24.03■■□□□ 1.44
TTC28-205ENST00000469670 DLG5Q8TDM6 1919 aa24.03■■□□□ 1.44
TTC28-205ENST00000469670 FAM155AB1AL88 458 aaPredicted RBP24.02■■□□□ 1.44
TTC28-205ENST00000469670 TMC4Q7Z404 712 aa24.02■■□□□ 1.44
TTC28-205ENST00000469670 GBA2Q9HCG7 927 aaPredicted RBP24.02■■□□□ 1.44
TTC28-205ENST00000469670 PSMD14O00487 310 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 TBC1D10BQ4KMP7 808 aaPredicted RBP24.01■■□□□ 1.43
TTC28-205ENST00000469670 COPS6Q7L5N1 327 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 KRT26Q7Z3Y9 468 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 C2orf69Q8N8R5 385 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 SAGE1Q9NXZ1 904 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 SH3TC1Q8TE82 1336 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
TTC28-205ENST00000469670 DUOX1Q9NRD9 1551 aa24■■□□□ 1.43
TTC28-205ENST00000469670 AIMP1Q12904 312 aaKnown RBP24■■□□□ 1.43
TTC28-205ENST00000469670 TCIRG1Q13488 830 aa24■■□□□ 1.43
TTC28-205ENST00000469670 CCDC102AQ96A19 550 aa24■■□□□ 1.43
TTC28-205ENST00000469670 KIF23Q02241 960 aaPredicted RBP23.99■■□□□ 1.43
TTC28-205ENST00000469670 WASHC4Q2M389 1173 aa23.99■■□□□ 1.43
TTC28-205ENST00000469670 XAGE3Q8WTP9 111 aa23.99■■□□□ 1.43
TTC28-205ENST00000469670 DBNDD1Q9H9R9 158 aa23.99■■□□□ 1.43
TTC28-205ENST00000469670 EGFRP00533 1210 aa23.98■■□□□ 1.43
TTC28-205ENST00000469670 PNNQ9H307 717 aaKnown RBP23.98■■□□□ 1.43
TTC28-205ENST00000469670 LAMB2P55268 1798 aa23.98■■□□□ 1.43
TTC28-205ENST00000469670 ANKRD36CQ5JPF3 1778 aa23.98■■□□□ 1.43
TTC28-205ENST00000469670 ADM5C9JUS6 153 aa23.97■■□□□ 1.43
TTC28-205ENST00000469670 ZNF157P51786 506 aaPredicted RBP23.97■■□□□ 1.43
TTC28-205ENST00000469670 RBM26Q5T8P6 1007 aaKnown RBP23.97■■□□□ 1.43
TTC28-205ENST00000469670 NECTIN2Q92692 538 aa23.97■■□□□ 1.43
TTC28-205ENST00000469670 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
TTC28-205ENST00000469670 NSFL1CQ9UNZ2 370 aaKnown RBP23.97■■□□□ 1.43
TTC28-205ENST00000469670 RIMBP2O15034 1052 aa23.96■■□□□ 1.43
TTC28-205ENST00000469670 TRPA1O75762 1119 aa23.96■■□□□ 1.43
TTC28-205ENST00000469670 RPS12P25398 132 aaKnown RBP23.96■■□□□ 1.43
TTC28-205ENST00000469670 SOX10P56693 466 aa23.96■■□□□ 1.43
TTC28-205ENST00000469670 RNF186Q9NXI6 227 aa23.96■■□□□ 1.43
TTC28-205ENST00000469670 TNRC18O15417 2968 aaPredicted RBP23.95■■□□□ 1.43
TTC28-205ENST00000469670 ZNF428Q96B54 188 aa23.95■■□□□ 1.42
TTC28-205ENST00000469670 BABAM1Q9NWV8 329 aa23.95■■□□□ 1.42
TTC28-205ENST00000469670 C6orf229H3BNL8 230 aa23.94■■□□□ 1.42
TTC28-205ENST00000469670 CELF1Q92879 486 aaKnown RBP23.94■■□□□ 1.42
TTC28-205ENST00000469670 POLLQ9UGP5 575 aa23.94■■□□□ 1.42
TTC28-205ENST00000469670 ECE2O60344 883 aa23.93■■□□□ 1.42
TTC28-205ENST00000469670 KCNQ5Q9NR82 932 aa23.93■■□□□ 1.42
TTC28-205ENST00000469670 LRRC37AA6NMS7 1700 aa23.93■■□□□ 1.42
TTC28-205ENST00000469670 RTL9Q8NET4 1388 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 SLC10A3P09131 477 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 RIPK4P57078 832 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 GPSM2P81274 684 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 DOK7Q18PE1 504 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 KIF4BQ2VIQ3 1234 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 EYA3Q99504 573 aa23.92■■□□□ 1.42
TTC28-205ENST00000469670 SF3B3Q15393 1217 aaKnown RBP23.91■■□□□ 1.42
TTC28-205ENST00000469670 SULF1Q8IWU6 871 aa23.91■■□□□ 1.42
TTC28-205ENST00000469670 CSRNP1Q96S65 589 aa23.91■■□□□ 1.42
TTC28-205ENST00000469670 TAF1P21675 1872 aa23.9■■□□□ 1.42
TTC28-205ENST00000469670 FAM89AQ96GI7 184 aa23.9■■□□□ 1.42
TTC28-205ENST00000469670 GGA3Q9NZ52 723 aa23.9■■□□□ 1.42
TTC28-205ENST00000469670 CTU1Q7Z7A3 348 aaKnown RBP23.89■■□□□ 1.41
TTC28-205ENST00000469670 PDE4DIPQ5VU43 2346 aa23.89■■□□□ 1.41
TTC28-205ENST00000469670 TBC1D16Q8TBP0 767 aa23.88■■□□□ 1.41
TTC28-205ENST00000469670 CDCA5Q96FF9 252 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms