RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 SYTL4Q96C24 671 aaPredicted RBP6.76□□□□□ -1.33
ITGA6-208ENST00000469534 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
ITGA6-208ENST00000469534 TNNQ9UQP3 1299 aa6.76□□□□□ -1.33
ITGA6-208ENST00000469534 C5P01031 1676 aa6.76□□□□□ -1.33
ITGA6-208ENST00000469534 PCDH11XQ9BZA7 1347 aa6.76□□□□□ -1.33
ITGA6-208ENST00000469534 PCDH11YQ9BZA8 1340 aa6.76□□□□□ -1.33
ITGA6-208ENST00000469534 ADAMTS7Q9UKP4 1686 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 PRAMEF22A3QJZ6 481 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 BTBD11A6QL63 1104 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 TULP1O00294 542 aaPredicted RBP6.75□□□□□ -1.33
ITGA6-208ENST00000469534 EXOC5O00471 708 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 ZNF853P0CG23 659 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 CABP4P57796 275 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 TAF7Q15545 349 aaPredicted RBP6.75□□□□□ -1.33
ITGA6-208ENST00000469534 DDB1Q16531 1140 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.75□□□□□ -1.33
ITGA6-208ENST00000469534 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
ITGA6-208ENST00000469534 NGEFQ8N5V2 710 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 FRAT1Q92837 279 aaPredicted RBP6.75□□□□□ -1.33
ITGA6-208ENST00000469534 QTRT2Q9H974 415 aaKnown RBP6.75□□□□□ -1.33
ITGA6-208ENST00000469534 ATRNO75882 1429 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 TNS2Q63HR2 1409 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 IL16Q14005 1332 aa6.75□□□□□ -1.33
ITGA6-208ENST00000469534 EIF2S2P20042 333 aaKnown RBP6.74□□□□□ -1.33
ITGA6-208ENST00000469534 CALD1Q05682 793 aaKnown RBP6.74□□□□□ -1.33
ITGA6-208ENST00000469534 TWISTNBQ3B726 338 aaPredicted RBP6.74□□□□□ -1.33
ITGA6-208ENST00000469534 MARCH10Q8NA82 808 aaPredicted RBP6.74□□□□□ -1.33
ITGA6-208ENST00000469534 GJD4Q96KN9 370 aaPredicted RBP6.74□□□□□ -1.33
ITGA6-208ENST00000469534 TRPC5Q9UL62 973 aaPredicted RBP6.74□□□□□ -1.33
ITGA6-208ENST00000469534 THSD7AQ9UPZ6 1657 aa6.74□□□□□ -1.33
ITGA6-208ENST00000469534 CEMIPQ8WUJ3 1361 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 POTECB2RU33 542 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 CHL1O00533 1208 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 HTATSF1O43719 755 aaKnown RBP6.73□□□□□ -1.33
ITGA6-208ENST00000469534 ANXA1P04083 346 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 NEFLP07196 543 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 CANXP27824 592 aaKnown RBP6.73□□□□□ -1.33
ITGA6-208ENST00000469534 PIP4K2AP48426 406 aaPredicted RBP6.73□□□□□ -1.33
ITGA6-208ENST00000469534 RPIAP49247 311 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 RRP1P56182 461 aaKnown RBP6.73□□□□□ -1.33
ITGA6-208ENST00000469534 GRIPAP1Q4V328 841 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 MSS51Q4VC12 460 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 C20orf194Q5TEA3 1177 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 RNF19BQ6ZMZ0 732 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 DCAF5Q96JK2 942 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 SLC52A2Q9HAB3 445 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 SMC4Q9NTJ3 1288 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 PKD2L1Q9P0L9 805 aa6.73□□□□□ -1.33
ITGA6-208ENST00000469534 FCF1Q9Y324 198 aaKnown RBP6.73□□□□□ -1.33
ITGA6-208ENST00000469534 SBF2Q86WG5 1849 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 KCNQ2O43526 872 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 PTCD1O75127 700 aaKnown RBP6.72□□□□□ -1.33
ITGA6-208ENST00000469534 VAMP4O75379 141 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 HSP90AB1P08238 724 aaKnown RBP6.72□□□□□ -1.33
ITGA6-208ENST00000469534 RARSP54136 660 aaKnown RBP6.72□□□□□ -1.33
ITGA6-208ENST00000469534 MDM2Q00987 491 aaPredicted RBP6.72□□□□□ -1.33
ITGA6-208ENST00000469534 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 SSH1Q8WYL5 1049 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 CCDC102AQ96A19 550 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 CLUAP1Q96AJ1 413 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 TMOD3Q9NYL9 352 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
ITGA6-208ENST00000469534 MRC1P22897 1456 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 PAPPAQ13219 1627 aa6.72□□□□□ -1.33
ITGA6-208ENST00000469534 BTAF1O14981 1849 aa6.71□□□□□ -1.33
ITGA6-208ENST00000469534 ST8SIA5O15466 376 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 KDM4AO75164 1064 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 EIF4A1P60842 406 aaKnown RBP6.71□□□□□ -1.34
ITGA6-208ENST00000469534 POTEAQ6S8J7 498 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 G2E3Q7L622 706 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 TTC5Q8N0Z6 440 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 PANK1Q8TE04 598 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 PIGBQ92521 554 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 ZNF428Q96B54 188 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 CRBNQ96SW2 442 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 PRDM9Q9NQV7 894 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 AAASQ9NRG9 546 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
ITGA6-208ENST00000469534 ASAP1Q9ULH1 1129 aa6.71□□□□□ -1.34
ITGA6-208ENST00000469534 LAMB4A4D0S4 1761 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 UBR2Q8IWV8 1755 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 MMP16P51512 607 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 KCNQ4P56696 695 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 Q3C1V9 767 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 EXOC6Q8TAG9 804 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 ZNF496Q96IT1 587 aaPredicted RBP6.7□□□□□ -1.34
ITGA6-208ENST00000469534 CDCA7Q9BWT1 371 aaPredicted RBP6.7□□□□□ -1.34
ITGA6-208ENST00000469534 NOB1Q9ULX3 412 aaKnown RBP6.7□□□□□ -1.34
ITGA6-208ENST00000469534 KCPQ6ZWJ8 1503 aa6.7□□□□□ -1.34
ITGA6-208ENST00000469534 ERVV-2B6SEH9 535 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 CD2BP2O95400 341 aaKnown RBP6.69□□□□□ -1.34
ITGA6-208ENST00000469534 MYL6BP14649 208 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 USP46P62068 366 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 PROSER3Q2NL68 480 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 HDGFL1Q5TGJ6 251 aa6.69□□□□□ -1.34
ITGA6-208ENST00000469534 ZNF772Q68DY9 489 aaPredicted RBP6.69□□□□□ -1.34
ITGA6-208ENST00000469534 ZNF790Q6PG37 636 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms