RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 NLGN1Q8N2Q7 840 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 NBPF15Q8N660 670 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 GGNBP2Q9H3C7 697 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 C12orf49Q9H741 205 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 HRH3Q9Y5N1 445 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
FAM49A-205ENST00000469507 IL2RAP01589 272 aa7.15□□□□□ -1.26
FAM49A-205ENST00000469507 ADD1P35611 737 aaKnown RBP7.15□□□□□ -1.26
FAM49A-205ENST00000469507 NFE2L2Q16236 605 aa7.15□□□□□ -1.26
FAM49A-205ENST00000469507 C8orf34Q49A92 452 aa7.15□□□□□ -1.26
FAM49A-205ENST00000469507 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
FAM49A-205ENST00000469507 CCDC116Q8IYX3 515 aa7.15□□□□□ -1.26
FAM49A-205ENST00000469507 NANOS1Q8WY41 292 aaKnown RBP7.15□□□□□ -1.26
FAM49A-205ENST00000469507 NUDT16Q96DE0 195 aaKnown RBP7.15□□□□□ -1.26
FAM49A-205ENST00000469507 ESYT1Q9BSJ8 1104 aa7.15□□□□□ -1.26
FAM49A-205ENST00000469507 OPLAHO14841 1288 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 ST13P50502 369 aaKnown RBP7.14□□□□□ -1.27
FAM49A-205ENST00000469507 TCEAL1Q15170 157 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 TLR1Q15399 786 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 PPP1R26Q5T8A7 1209 aaPredicted RBP7.14□□□□□ -1.27
FAM49A-205ENST00000469507 SH3PXD2AQ5TCZ1 1133 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 GPAT2Q6NUI2 795 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 TREML1Q86YW5 311 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 SVOPQ8N4V2 548 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 CCDC155Q8N6L0 562 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 GPR152Q8TDT2 470 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 CNKSR1Q969H4 720 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 L3MBTL2Q969R5 705 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 OSBPL7Q9BZF2 842 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 ARHGEF10LQ9HCE6 1279 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 RAB6BQ9NRW1 208 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 KLK14Q9P0G3 267 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 ZNF232Q9UNY5 417 aa7.14□□□□□ -1.27
FAM49A-205ENST00000469507 ARHGEF15O94989 841 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 HSD3B2P26439 372 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 IRS1P35568 1242 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 PAK2Q13177 524 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 CBLBQ13191 982 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 C1orf53Q5VUE5 145 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 ZDHHC1Q8WTX9 485 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 MKL1Q969V6 931 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 MRFAP1L1Q96HT8 127 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 PHACTR1Q9C0D0 580 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 CABP1Q9NZU7 370 aa7.13□□□□□ -1.27
FAM49A-205ENST00000469507 EIF5BO60841 1220 aaKnown RBP7.12□□□□□ -1.27
FAM49A-205ENST00000469507 IGBP1P78318 339 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 BMS1Q14692 1282 aaKnown RBP7.12□□□□□ -1.27
FAM49A-205ENST00000469507 PTPROQ16827 1216 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 NBPF6Q5VWK0 638 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 XKR5Q6UX68 686 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 CKAP2LQ8IYA6 745 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 RASGRP4Q8TDF6 673 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 CCDC74AQ96AQ1 378 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 GPRASP2Q96D09 838 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 NBPF4Q96M43 638 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 FAM8A1Q9UBU6 413 aa7.12□□□□□ -1.27
FAM49A-205ENST00000469507 SLC35F4A4IF30 521 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 MARCH6O60337 910 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 SLURP2P0DP57 97 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 CENPCQ03188 943 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 JAZF1Q86VZ6 243 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 ZNF295-AS1Q8N0V1 137 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 VWA5B2Q8N398 1253 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 KCNB2Q92953 911 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 GPATCH3Q96I76 525 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 SEC16BQ96JE7 1060 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 POLR3GLQ9BT43 218 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 BRINP2Q9C0B6 783 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 NEUROD4Q9HD90 331 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
FAM49A-205ENST00000469507 A6NHS1 94 aa7.1□□□□□ -1.27
FAM49A-205ENST00000469507 SPINT1O43278 529 aa7.1□□□□□ -1.27
FAM49A-205ENST00000469507 XRCC5P13010 732 aaKnown RBP7.1□□□□□ -1.27
FAM49A-205ENST00000469507 IBSPP21815 317 aaPredicted RBP7.1□□□□□ -1.27
FAM49A-205ENST00000469507 MEI1Q5TIA1 1274 aa7.1□□□□□ -1.27
FAM49A-205ENST00000469507 EPS8L3Q8TE67 593 aaKnown RBP7.1□□□□□ -1.27
FAM49A-205ENST00000469507 FHDC1Q9C0D6 1143 aaPredicted RBP7.1□□□□□ -1.27
FAM49A-205ENST00000469507 hCG_2014768A0A024R1R8 64 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 CDC14CA4D256 554 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 K7ELQ4 463 aaPredicted RBP7.09□□□□□ -1.27
FAM49A-205ENST00000469507 RAB11FIP3O75154 756 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 MICAL2O94851 1124 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 ITGA6P23229 1130 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 CLN3Q13286 438 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 Q6ZVU0 165 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 PPARGC1BQ86YN6 1023 aaKnown RBP7.09□□□□□ -1.27
FAM49A-205ENST00000469507 ZFYVE28Q9HCC9 887 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 DMGDHQ9UI17 866 aaKnown RBP7.09□□□□□ -1.27
FAM49A-205ENST00000469507 PARP3Q9Y6F1 533 aa7.09□□□□□ -1.27
FAM49A-205ENST00000469507 TNFRSF21O75509 655 aa7.08□□□□□ -1.28
FAM49A-205ENST00000469507 USP17L7P0C7H9 530 aa7.08□□□□□ -1.28
FAM49A-205ENST00000469507 SERINC3Q13530 473 aa7.08□□□□□ -1.28
FAM49A-205ENST00000469507 HIF1AQ16665 826 aa7.08□□□□□ -1.28
FAM49A-205ENST00000469507 RNF187Q5TA31 235 aaPredicted RBP7.08□□□□□ -1.28
FAM49A-205ENST00000469507 USPL1Q5W0Q7 1092 aa7.08□□□□□ -1.28
FAM49A-205ENST00000469507 PI16Q6UXB8 463 aa7.08□□□□□ -1.28
FAM49A-205ENST00000469507 ZCRB1Q8TBF4 217 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms