RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 BRPF1P55201 1214 aaPredicted RBP25.72■■□□□ 1.71
UPK3B-204ENST00000469114 TNIP1Q15025 636 aa25.72■■□□□ 1.71
UPK3B-204ENST00000469114 LAMB2P55268 1798 aa25.72■■□□□ 1.71
UPK3B-204ENST00000469114 KIAA2012Q0VF49 1180 aa25.71■■□□□ 1.71
UPK3B-204ENST00000469114 ANKRD36CQ5JPF3 1778 aa25.71■■□□□ 1.71
UPK3B-204ENST00000469114 MAPK8IP3Q9UPT6 1336 aa25.7■■□□□ 1.71
UPK3B-204ENST00000469114 LRP10Q7Z4F1 713 aa25.7■■□□□ 1.7
UPK3B-204ENST00000469114 PNNQ9H307 717 aaKnown RBP25.7■■□□□ 1.7
UPK3B-204ENST00000469114 ZNF408Q9H9D4 720 aa25.7■■□□□ 1.7
UPK3B-204ENST00000469114 TSPYL4Q9UJ04 414 aa25.7■■□□□ 1.7
UPK3B-204ENST00000469114 CASP8AP2Q9UKL3 1982 aa25.69■■□□□ 1.7
UPK3B-204ENST00000469114 RAD17O75943 681 aa25.69■■□□□ 1.7
UPK3B-204ENST00000469114 EIF2S2P20042 333 aaKnown RBP25.69■■□□□ 1.7
UPK3B-204ENST00000469114 PDIA6Q15084 440 aa25.69■■□□□ 1.7
UPK3B-204ENST00000469114 HSP90AB3PQ58FF7 597 aa25.69■■□□□ 1.7
UPK3B-204ENST00000469114 CDC37L1Q7L3B6 337 aa25.69■■□□□ 1.7
UPK3B-204ENST00000469114 DDX46Q7L014 1031 aaKnown RBP25.68■■□□□ 1.7
UPK3B-204ENST00000469114 MCOLN1Q9GZU1 580 aa25.68■■□□□ 1.7
UPK3B-204ENST00000469114 HIRAP54198 1017 aaPredicted RBP25.67■■□□□ 1.7
UPK3B-204ENST00000469114 TRPM4Q8TD43 1214 aa25.67■■□□□ 1.7
UPK3B-204ENST00000469114 CFAP44Q96MT7 982 aa25.67■■□□□ 1.7
UPK3B-204ENST00000469114 HCLS1P14317 486 aaPredicted RBP25.66■■□□□ 1.7
UPK3B-204ENST00000469114 GRAPQ13588 217 aa25.66■■□□□ 1.7
UPK3B-204ENST00000469114 NLRP10Q86W26 655 aa25.66■■□□□ 1.7
UPK3B-204ENST00000469114 GRAPLQ8TC17 118 aaPredicted RBP25.66■■□□□ 1.7
UPK3B-204ENST00000469114 CNOT7Q9UIV1 285 aaKnown RBP25.66■■□□□ 1.7
UPK3B-204ENST00000469114 H7C1D1 291 aa25.65■■□□□ 1.7
UPK3B-204ENST00000469114 NOGQ13253 232 aa25.65■■□□□ 1.7
UPK3B-204ENST00000469114 PROSER3Q2NL68 480 aa25.65■■□□□ 1.7
UPK3B-204ENST00000469114 ANXA1P04083 346 aa25.64■■□□□ 1.7
UPK3B-204ENST00000469114 TMC4Q7Z404 712 aa25.64■■□□□ 1.7
UPK3B-204ENST00000469114 TRMT112Q9UI30 125 aaKnown RBP25.64■■□□□ 1.7
UPK3B-204ENST00000469114 ZEB1P37275 1124 aaPredicted RBP25.63■■□□□ 1.69
UPK3B-204ENST00000469114 SH3TC1Q8TE82 1336 aa25.63■■□□□ 1.69
UPK3B-204ENST00000469114 YDJCA8MPS7 323 aa25.62■■□□□ 1.69
UPK3B-204ENST00000469114 HUNKP57058 714 aa25.62■■□□□ 1.69
UPK3B-204ENST00000469114 DGKZQ13574 1117 aa25.62■■□□□ 1.69
UPK3B-204ENST00000469114 COPS6Q7L5N1 327 aa25.62■■□□□ 1.69
UPK3B-204ENST00000469114 MICALL2Q8IY33 904 aa25.62■■□□□ 1.69
UPK3B-204ENST00000469114 BABAM1Q9NWV8 329 aa25.62■■□□□ 1.69
UPK3B-204ENST00000469114 DUOX1Q9NRD9 1551 aa25.61■■□□□ 1.69
UPK3B-204ENST00000469114 LRRC37AA6NMS7 1700 aa25.61■■□□□ 1.69
UPK3B-204ENST00000469114 AIMP1Q12904 312 aaKnown RBP25.61■■□□□ 1.69
UPK3B-204ENST00000469114 USP48Q86UV5 1035 aa25.61■■□□□ 1.69
UPK3B-204ENST00000469114 XAGE3Q8WTP9 111 aa25.61■■□□□ 1.69
UPK3B-204ENST00000469114 TAF1P21675 1872 aa25.61■■□□□ 1.69
UPK3B-204ENST00000469114 SHTN1A0MZ66 631 aa25.6■■□□□ 1.69
UPK3B-204ENST00000469114 TCIRG1Q13488 830 aa25.6■■□□□ 1.69
UPK3B-204ENST00000469114 DPF2Q92785 391 aa25.6■■□□□ 1.69
UPK3B-204ENST00000469114 NECTIN2Q92692 538 aa25.58■■□□□ 1.69
UPK3B-204ENST00000469114 ZBTB12Q9Y330 459 aaPredicted RBP25.58■■□□□ 1.69
UPK3B-204ENST00000469114 RIPK4P57078 832 aa25.57■■□□□ 1.68
UPK3B-204ENST00000469114 WASHC4Q2M389 1173 aa25.57■■□□□ 1.68
UPK3B-204ENST00000469114 ZIC5Q96T25 663 aa25.57■■□□□ 1.68
UPK3B-204ENST00000469114 PSMD14O00487 310 aa25.56■■□□□ 1.68
UPK3B-204ENST00000469114 LMOD3Q0VAK6 560 aa25.56■■□□□ 1.68
UPK3B-204ENST00000469114 SAMD7Q7Z3H4 446 aa25.56■■□□□ 1.68
UPK3B-204ENST00000469114 KRT26Q7Z3Y9 468 aa25.56■■□□□ 1.68
UPK3B-204ENST00000469114 TBC1D10BQ4KMP7 808 aaPredicted RBP25.55■■□□□ 1.68
UPK3B-204ENST00000469114 RGMBQ6NW40 437 aa25.55■■□□□ 1.68
UPK3B-204ENST00000469114 C2orf69Q8N8R5 385 aa25.55■■□□□ 1.68
UPK3B-204ENST00000469114 GBA2Q9HCG7 927 aaPredicted RBP25.55■■□□□ 1.68
UPK3B-204ENST00000469114 POLR2AP24928 1970 aaKnown RBP25.55■■□□□ 1.68
UPK3B-204ENST00000469114 DDX60Q8IY21 1712 aaKnown RBP25.54■■□□□ 1.68
UPK3B-204ENST00000469114 RPS12P25398 132 aaKnown RBP25.54■■□□□ 1.68
UPK3B-204ENST00000469114 CCDC102AQ96A19 550 aa25.54■■□□□ 1.68
UPK3B-204ENST00000469114 DBNDD1Q9H9R9 158 aa25.54■■□□□ 1.68
UPK3B-204ENST00000469114 NSFL1CQ9UNZ2 370 aaKnown RBP25.54■■□□□ 1.68
UPK3B-204ENST00000469114 PDE4DIPQ5VU43 2346 aa25.53■■□□□ 1.68
UPK3B-204ENST00000469114 DLK2Q6UY11 383 aa25.53■■□□□ 1.68
UPK3B-204ENST00000469114 DCPSQ96C86 337 aaKnown RBP25.53■■□□□ 1.68
UPK3B-204ENST00000469114 SAGE1Q9NXZ1 904 aa25.53■■□□□ 1.68
UPK3B-204ENST00000469114 FAM155AB1AL88 458 aaPredicted RBP25.52■■□□□ 1.68
UPK3B-204ENST00000469114 C6orf229H3BNL8 230 aa25.52■■□□□ 1.68
UPK3B-204ENST00000469114 EYA3Q99504 573 aa25.52■■□□□ 1.68
UPK3B-204ENST00000469114 RIMBP2O15034 1052 aa25.51■■□□□ 1.67
UPK3B-204ENST00000469114 CELF1Q92879 486 aaKnown RBP25.51■■□□□ 1.67
UPK3B-204ENST00000469114 ADM5C9JUS6 153 aa25.5■■□□□ 1.67
UPK3B-204ENST00000469114 ECE2O60344 883 aa25.5■■□□□ 1.67
UPK3B-204ENST00000469114 TMPOP42166 694 aaKnown RBP25.5■■□□□ 1.67
UPK3B-204ENST00000469114 SF3B3Q15393 1217 aaKnown RBP25.5■■□□□ 1.67
UPK3B-204ENST00000469114 RBM26Q5T8P6 1007 aaKnown RBP25.5■■□□□ 1.67
UPK3B-204ENST00000469114 PLBD2Q8NHP8 589 aa25.5■■□□□ 1.67
UPK3B-204ENST00000469114 AKAP11Q9UKA4 1901 aa25.49■■□□□ 1.67
UPK3B-204ENST00000469114 EGFRP00533 1210 aa25.49■■□□□ 1.67
UPK3B-204ENST00000469114 ZNF157P51786 506 aaPredicted RBP25.49■■□□□ 1.67
UPK3B-204ENST00000469114 KIF23Q02241 960 aaPredicted RBP25.49■■□□□ 1.67
UPK3B-204ENST00000469114 ZNF428Q96B54 188 aa25.49■■□□□ 1.67
UPK3B-204ENST00000469114 FAM89AQ96GI7 184 aa25.49■■□□□ 1.67
UPK3B-204ENST00000469114 POLLQ9UGP5 575 aa25.49■■□□□ 1.67
UPK3B-204ENST00000469114 GPSM2P81274 684 aa25.48■■□□□ 1.67
UPK3B-204ENST00000469114 CHPF2Q9P2E5 772 aa25.48■■□□□ 1.67
UPK3B-204ENST00000469114 PCDH10Q9P2E7 1040 aa25.48■■□□□ 1.67
UPK3B-204ENST00000469114 RTL9Q8NET4 1388 aa25.47■■□□□ 1.67
UPK3B-204ENST00000469114 DOK7Q18PE1 504 aa25.47■■□□□ 1.67
UPK3B-204ENST00000469114 KIF4BQ2VIQ3 1234 aa25.47■■□□□ 1.67
UPK3B-204ENST00000469114 SULF1Q8IWU6 871 aa25.47■■□□□ 1.67
UPK3B-204ENST00000469114 ISCA1Q9BUE6 129 aa25.47■■□□□ 1.67
UPK3B-204ENST00000469114 KRT24Q2M2I5 525 aa25.46■■□□□ 1.67
UPK3B-204ENST00000469114 ANKRD13DQ6ZTN6 518 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms