RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
NXF3-204ENST00000468528 CCDC57Q2TAC2 916 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 LMBR1LQ6UX01 489 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 TTLL11Q8NHH1 800 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 GCC1Q96CN9 775 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 KAZALD1Q96I82 304 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 CCDC136Q96JN2 1154 aa8.91□□□□□ -0.98
NXF3-204ENST00000468528 ANKRD18BA2A2Z9 1011 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.98
NXF3-204ENST00000468528 POLA2Q14181 598 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 CRY2Q49AN0 593 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 RTL5Q5HYW3 569 aaPredicted RBP8.9□□□□□ -0.98
NXF3-204ENST00000468528 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 TMC4Q7Z404 712 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 NUTM1Q86Y26 1132 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 CDC5LQ99459 802 aaKnown RBP8.9□□□□□ -0.98
NXF3-204ENST00000468528 SPON1Q9HCB6 807 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 PCDHB15Q9Y5E8 787 aa8.9□□□□□ -0.98
NXF3-204ENST00000468528 CASZ1Q86V15 1759 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 NRXN2Q9P2S2 1712 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 RAB11FIP3O75154 756 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 ZBTB7AO95365 584 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 ALDH1B1P30837 517 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 HOXA10P31260 410 aaPredicted RBP8.89□□□□□ -0.99
NXF3-204ENST00000468528 EPHA10Q5JZY3 1008 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 DDX46Q7L014 1031 aaKnown RBP8.89□□□□□ -0.99
NXF3-204ENST00000468528 CENPQQ7L2Z9 268 aaPredicted RBP8.89□□□□□ -0.99
NXF3-204ENST00000468528 ERC1Q8IUD2 1116 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 RPGRQ92834 1020 aaKnown RBP8.89□□□□□ -0.99
NXF3-204ENST00000468528 PDGFDQ9GZP0 370 aaPredicted RBP8.89□□□□□ -0.99
NXF3-204ENST00000468528 C1orf115Q9H7X2 142 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
NXF3-204ENST00000468528 CHMP3Q9Y3E7 222 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
NXF3-204ENST00000468528 ABCC12Q96J65 1359 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 PSDA5PKW4 1024 aaPredicted RBP8.88□□□□□ -0.99
NXF3-204ENST00000468528 H0YIN7 160 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 BBOX1O75936 387 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 CIAO1O76071 339 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 NPR1P16066 1061 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 ITGA6P23229 1130 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 TGFB2P61812 414 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 TAF7LQ5H9L4 462 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 SIRT2Q8IXJ6 389 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 SMC5Q8IY18 1101 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 SYNE4Q8N205 404 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 JARID2Q92833 1246 aaPredicted RBP8.88□□□□□ -0.99
NXF3-204ENST00000468528 RBM17Q96I25 401 aaKnown RBP8.88□□□□□ -0.99
NXF3-204ENST00000468528 CRAMP1Q96RY5 1269 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 DCTPP1Q9H773 170 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
NXF3-204ENST00000468528 CD2APQ9Y5K6 639 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 C10orf71Q711Q0 1435 aa8.88□□□□□ -0.99
NXF3-204ENST00000468528 LAMB2P55268 1798 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 PNMA6EA0A0J9YXQ4 647 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 IGHMBP2P38935 993 aaKnown RBP8.87□□□□□ -0.99
NXF3-204ENST00000468528 IL15P40933 162 aaPredicted RBP8.87□□□□□ -0.99
NXF3-204ENST00000468528 G3BP1Q13283 466 aaKnown RBP eCLIP8.87□□□□□ -0.99
NXF3-204ENST00000468528 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 STYK1Q6J9G0 422 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 ANKRD18AQ8IVF6 992 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 MPHOSPH8Q99549 860 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 TMX4Q9H1E5 349 aaPredicted RBP8.87□□□□□ -0.99
NXF3-204ENST00000468528 GREM2Q9H772 168 aa8.87□□□□□ -0.99
NXF3-204ENST00000468528 ATF5Q9Y2D1 282 aaPredicted RBP8.87□□□□□ -0.99
NXF3-204ENST00000468528 EYA2O00167 538 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 SURF6O75683 361 aaKnown RBP8.86□□□□□ -0.99
NXF3-204ENST00000468528 SRGNP10124 158 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 PTGER2P43116 358 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 RFX5P48382 616 aaPredicted RBP8.86□□□□□ -0.99
NXF3-204ENST00000468528 RPS8P62241 208 aaKnown RBP8.86□□□□□ -0.99
NXF3-204ENST00000468528 PTPN12Q05209 780 aaKnown RBP8.86□□□□□ -0.99
NXF3-204ENST00000468528 GRAPQ13588 217 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 LDHAL6AQ6ZMR3 332 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 GRAPLQ8TC17 118 aaPredicted RBP8.86□□□□□ -0.99
NXF3-204ENST00000468528 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 KIF1BPQ96EK5 621 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 MASTLQ96GX5 879 aa8.86□□□□□ -0.99
NXF3-204ENST00000468528 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
NXF3-204ENST00000468528 MROH5Q6ZUA9 1318 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 OS9Q13438 667 aaPredicted RBP8.85□□□□□ -0.99
NXF3-204ENST00000468528 CC2D2BQ6DHV5 1058 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 C2CD5Q86YS7 1000 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 LRRCC1Q9C099 1032 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 CNNM1Q9NRU3 951 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 MYH3P11055 1940 aa8.85□□□□□ -0.99
NXF3-204ENST00000468528 DDX60Q8IY21 1712 aaKnown RBP8.85□□□□□ -0.99
NXF3-204ENST00000468528 KDM2BQ8NHM5 1336 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 IGHDP01880 384 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 SOGA3Q5TF21 947 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 GPR108Q9NPR9 543 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 AKAP2Q9Y2D5 859 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 RIPOR2Q9Y4F9 1068 aa8.84□□□□□ -0.99
NXF3-204ENST00000468528 NUCB1Q02818 461 aa8.83□□□□□ -1
NXF3-204ENST00000468528 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms