RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 PTPRCP08575 1304 aa4.62□□□□□ -1.67
COMMD3-207ENST00000468469 SH3TC1Q8TE82 1336 aa4.62□□□□□ -1.67
COMMD3-207ENST00000468469 KIF16BQ96L93 1317 aa4.62□□□□□ -1.67
COMMD3-207ENST00000468469 DDX60Q8IY21 1712 aaKnown RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 SPDYE4A6NLX3 237 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 F6X3S4 739 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 H0YIN7 160 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 MAP3K13O43283 966 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 SRGNP10124 158 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 YBX3P16989 372 aaKnown RBP eCLIP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 CWF19L2Q2TBE0 894 aaKnown RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 ALDH1L2Q3SY69 923 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 STYK1Q6J9G0 422 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 MRPL50Q8N5N7 158 aaKnown RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 ZBTB38Q8NAP3 1195 aaPredicted RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 CCDC191Q8NCU4 936 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 SSH1Q8WYL5 1049 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 RPGRQ92834 1020 aaKnown RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 CNKSR1Q969H4 720 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 ZNF622Q969S3 477 aaKnown RBP eCLIP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 MASTLQ96GX5 879 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 YTHDC1Q96MU7 727 aaKnown RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 CWC25Q9NXE8 425 aaPredicted RBP4.61□□□□□ -1.67
COMMD3-207ENST00000468469 PIM2Q9P1W9 311 aa4.61□□□□□ -1.67
COMMD3-207ENST00000468469 NEURL1BA8MQ27 555 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 IRS4O14654 1257 aaPredicted RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 GRIN3BO60391 1043 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 PCCAP05165 728 aaPredicted RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 IGKV5-2P06315 115 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 HCLS1P14317 486 aaPredicted RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 HSP90B1P14625 803 aaKnown RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 NPR1P16066 1061 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 KCNA3P22001 575 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 RARSP54136 660 aaKnown RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 TRIM28Q13263 835 aaKnown RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 CRY2Q49AN0 593 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 DALRD3Q5D0E6 543 aaKnown RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 RTL5Q5HYW3 569 aaPredicted RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 PRPF40BQ6NWY9 871 aaKnown RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 SLC4A10Q6U841 1118 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 C3orf67Q6ZVT6 689 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 UBE3BQ7Z3V4 1068 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 TTLL6Q8N841 843 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 LINS1Q8NG48 757 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 FAM89AQ96GI7 184 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 NLRP3Q96P20 1036 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 API5Q9BZZ5 524 aaKnown RBP4.6□□□□□ -1.67
COMMD3-207ENST00000468469 ABCC4O15439 1325 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 CDHR2Q9BYE9 1310 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 ARFGEF1Q9Y6D6 1849 aa4.6□□□□□ -1.67
COMMD3-207ENST00000468469 KLRG2A4D1S0 409 aaPredicted RBP4.59□□□□□ -1.67
COMMD3-207ENST00000468469 LRRC37AA6NMS7 1700 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 PPEF1O14829 653 aaPredicted RBP4.59□□□□□ -1.67
COMMD3-207ENST00000468469 ALDH1L1O75891 902 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 BRPF1P55201 1214 aaPredicted RBP4.59□□□□□ -1.67
COMMD3-207ENST00000468469 CACNA1SQ13698 1873 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 GCKRQ14397 625 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 SLC10A5Q5PT55 438 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 BEND3Q5T5X7 828 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 IER5LQ5T953 404 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 SOGA3Q5TF21 947 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 TIAM2Q8IVF5 1701 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 SYNE4Q8N205 404 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 MARVELD3Q96A59 401 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 RBM17Q96I25 401 aaKnown RBP4.59□□□□□ -1.67
COMMD3-207ENST00000468469 TMEM121BQ9BXQ6 578 aaPredicted RBP4.59□□□□□ -1.67
COMMD3-207ENST00000468469 SRCIN1Q9C0H9 1055 aa4.59□□□□□ -1.67
COMMD3-207ENST00000468469 COL4A1P02462 1669 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 SNED1Q8TER0 1413 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 H7C1W4 665 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 GRM8O00222 908 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 C21orf2O43822 256 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 PDE8AO60658 829 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 BCAR3O75815 825 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 TRIM27P14373 513 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 ALDH1B1P30837 517 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 HOXA10P31260 410 aaPredicted RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 CTSWP56202 376 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 RASSF7Q02833 373 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 GRAPQ13588 217 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 SF3B3Q15393 1217 aaKnown RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 CCDC152Q4G0S7 254 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 CCDC93Q567U6 631 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 ZKSCAN2Q63HK3 967 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 ATF7IPQ6VMQ6 1270 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 ARHGAP27Q6ZUM4 889 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 DDX46Q7L014 1031 aaKnown RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 GRAPLQ8TC17 118 aaPredicted RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 JARID2Q92833 1246 aaPredicted RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 FRAT1Q92837 279 aaPredicted RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 CCDC85AQ96PX6 553 aaPredicted RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 CRAMP1Q96RY5 1269 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 TAOK3Q9H2K8 898 aa4.58□□□□□ -1.68
COMMD3-207ENST00000468469 C9orf78Q9NZ63 289 aaPredicted RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 NOB1Q9ULX3 412 aaKnown RBP4.58□□□□□ -1.68
COMMD3-207ENST00000468469 DUOX1Q9NRD9 1551 aa4.57□□□□□ -1.68
COMMD3-207ENST00000468469 RTL9Q8NET4 1388 aa4.57□□□□□ -1.68
COMMD3-207ENST00000468469 LTBP3Q9NS15 1303 aa4.57□□□□□ -1.68
COMMD3-207ENST00000468469 CACNA1FO60840 1977 aa4.57□□□□□ -1.68
COMMD3-207ENST00000468469 IPO8O15397 1037 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms