RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
SNIP1-202ENST00000468040 BICC1Q9H694 974 aaKnown RBP19.04■□□□□ 0.64
SNIP1-202ENST00000468040 CSF1RP07333 972 aa19.03■□□□□ 0.64
SNIP1-202ENST00000468040 SRGNP10124 158 aa19.03■□□□□ 0.64
SNIP1-202ENST00000468040 EPHA10Q5JZY3 1008 aa19.03■□□□□ 0.64
SNIP1-202ENST00000468040 LMBR1LQ6UX01 489 aa19.03■□□□□ 0.64
SNIP1-202ENST00000468040 RTL9Q8NET4 1388 aa19.03■□□□□ 0.64
SNIP1-202ENST00000468040 NPR1P16066 1061 aa19.02■□□□□ 0.64
SNIP1-202ENST00000468040 IRX6P78412 446 aaPredicted RBP19.02■□□□□ 0.64
SNIP1-202ENST00000468040 ANKRD44Q8N8A2 993 aa19.02■□□□□ 0.64
SNIP1-202ENST00000468040 MASTLQ96GX5 879 aa19.02■□□□□ 0.64
SNIP1-202ENST00000468040 FHDC1Q9C0D6 1143 aaPredicted RBP19.02■□□□□ 0.64
SNIP1-202ENST00000468040 COL11A2P13942 1736 aaPredicted RBP19.01■□□□□ 0.63
SNIP1-202ENST00000468040 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
SNIP1-202ENST00000468040 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
SNIP1-202ENST00000468040 DDX46Q7L014 1031 aaKnown RBP19.01■□□□□ 0.63
SNIP1-202ENST00000468040 RBM17Q96I25 401 aaKnown RBP19.01■□□□□ 0.63
SNIP1-202ENST00000468040 C1orf115Q9H7X2 142 aa19.01■□□□□ 0.63
SNIP1-202ENST00000468040 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
SNIP1-202ENST00000468040 CHRNA5P30532 468 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 MTX1Q13505 466 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 FAM161AQ3B820 660 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 EXOC6Q8TAG9 804 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 GREM2Q9H772 168 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 DLEC1Q9Y238 1755 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
SNIP1-202ENST00000468040 DPEP1P16444 411 aa18.99■□□□□ 0.63
SNIP1-202ENST00000468040 ALDH1B1P30837 517 aa18.99■□□□□ 0.63
SNIP1-202ENST00000468040 IFIT5Q13325 482 aaKnown RBP18.99■□□□□ 0.63
SNIP1-202ENST00000468040 CCDC57Q2TAC2 916 aa18.99■□□□□ 0.63
SNIP1-202ENST00000468040 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
SNIP1-202ENST00000468040 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
SNIP1-202ENST00000468040 CRAMP1Q96RY5 1269 aa18.99■□□□□ 0.63
SNIP1-202ENST00000468040 CDC5LQ99459 802 aaKnown RBP18.99■□□□□ 0.63
SNIP1-202ENST00000468040 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
SNIP1-202ENST00000468040 ANKRD18BA2A2Z9 1011 aa18.98■□□□□ 0.63
SNIP1-202ENST00000468040 ITGA6P23229 1130 aa18.98■□□□□ 0.63
SNIP1-202ENST00000468040 CEP85Q6P2H3 762 aa18.98■□□□□ 0.63
SNIP1-202ENST00000468040 RPAP2Q8IXW5 612 aaPredicted RBP18.98■□□□□ 0.63
SNIP1-202ENST00000468040 ZNF622Q969S3 477 aaKnown RBP eCLIP18.98■□□□□ 0.632e-9■□□□□ 10.5
SNIP1-202ENST00000468040 SYT17Q9BSW7 474 aa18.98■□□□□ 0.63
SNIP1-202ENST00000468040 SRGAP3O43295 1099 aa18.97■□□□□ 0.63
SNIP1-202ENST00000468040 KCNA3P22001 575 aa18.96■□□□□ 0.63
SNIP1-202ENST00000468040 ATP8B2P98198 1209 aa18.96■□□□□ 0.63
SNIP1-202ENST00000468040 GRAPQ13588 217 aa18.96■□□□□ 0.63
SNIP1-202ENST00000468040 TAF7LQ5H9L4 462 aa18.96■□□□□ 0.63
SNIP1-202ENST00000468040 NLGN2Q8NFZ4 835 aa18.96■□□□□ 0.63
SNIP1-202ENST00000468040 GRAPLQ8TC17 118 aaPredicted RBP18.96■□□□□ 0.63
SNIP1-202ENST00000468040 PIM2Q9P1W9 311 aa18.96■□□□□ 0.63
SNIP1-202ENST00000468040 BBOX1O75936 387 aa18.95■□□□□ 0.62
SNIP1-202ENST00000468040 ANKRD18AQ8IVF6 992 aa18.95■□□□□ 0.62
SNIP1-202ENST00000468040 TTLL6Q8N841 843 aa18.95■□□□□ 0.62
SNIP1-202ENST00000468040 SEC31BQ9NQW1 1179 aa18.95■□□□□ 0.62
SNIP1-202ENST00000468040 HMMRO75330 724 aa18.94■□□□□ 0.62
SNIP1-202ENST00000468040 IGHMBP2P38935 993 aaKnown RBP18.94■□□□□ 0.62
SNIP1-202ENST00000468040 RPS8P62241 208 aaKnown RBP18.94■□□□□ 0.62
SNIP1-202ENST00000468040 TMC4Q7Z404 712 aa18.94■□□□□ 0.62
SNIP1-202ENST00000468040 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
SNIP1-202ENST00000468040 BRCA1P38398 1863 aaKnown RBP18.93■□□□□ 0.62
SNIP1-202ENST00000468040 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
SNIP1-202ENST00000468040 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
SNIP1-202ENST00000468040 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
SNIP1-202ENST00000468040 MPHOSPH8Q99549 860 aa18.93■□□□□ 0.62
SNIP1-202ENST00000468040 PPEF1O14829 653 aaPredicted RBP18.92■□□□□ 0.62
SNIP1-202ENST00000468040 RFX5P48382 616 aaPredicted RBP18.92■□□□□ 0.62
SNIP1-202ENST00000468040 POLA2Q14181 598 aa18.92■□□□□ 0.62
SNIP1-202ENST00000468040 DALRD3Q5D0E6 543 aaKnown RBP18.92■□□□□ 0.62
SNIP1-202ENST00000468040 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
SNIP1-202ENST00000468040 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
SNIP1-202ENST00000468040 BSDC1Q9NW68 430 aaPredicted RBP18.91■□□□□ 0.62
SNIP1-202ENST00000468040 FBXO3Q9UK99 471 aa18.91■□□□□ 0.62
SNIP1-202ENST00000468040 PCDHB15Q9Y5E8 787 aa18.91■□□□□ 0.62
SNIP1-202ENST00000468040 TAF1P21675 1872 aa18.9■□□□□ 0.62
SNIP1-202ENST00000468040 PTPN12Q05209 780 aaKnown RBP18.9■□□□□ 0.62
SNIP1-202ENST00000468040 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
SNIP1-202ENST00000468040 LDHAL6AQ6ZMR3 332 aa18.9■□□□□ 0.62
SNIP1-202ENST00000468040 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
SNIP1-202ENST00000468040 ZNF594Q96JF6 807 aaPredicted RBP18.9■□□□□ 0.62
SNIP1-202ENST00000468040 CACNA1SQ13698 1873 aa18.9■□□□□ 0.62
SNIP1-202ENST00000468040 COL4A1P02462 1669 aa18.89■□□□□ 0.61
SNIP1-202ENST00000468040 KLHDC4Q8TBB5 520 aa18.89■□□□□ 0.61
SNIP1-202ENST00000468040 CNNM1Q9NRU3 951 aa18.89■□□□□ 0.61
SNIP1-202ENST00000468040 ATP6V0A2Q9Y487 856 aa18.89■□□□□ 0.61
SNIP1-202ENST00000468040 SLX4Q8IY92 1834 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 CIAO1O76071 339 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 CC2D2BQ6DHV5 1058 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 BCS1LQ9Y276 419 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 SPEF2Q9C093 1822 aa18.88■□□□□ 0.61
SNIP1-202ENST00000468040 LRRC37AA6NMS7 1700 aa18.87■□□□□ 0.61
SNIP1-202ENST00000468040 EYA2O00167 538 aa18.87■□□□□ 0.61
SNIP1-202ENST00000468040 HDAC1Q13547 482 aaPredicted RBP18.87■□□□□ 0.61
SNIP1-202ENST00000468040 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
SNIP1-202ENST00000468040 PA2G4Q9UQ80 394 aaKnown RBP18.87■□□□□ 0.61
SNIP1-202ENST00000468040 MROH5Q6ZUA9 1318 aa18.86■□□□□ 0.61
SNIP1-202ENST00000468040 SURF6O75683 361 aaKnown RBP18.86■□□□□ 0.61
SNIP1-202ENST00000468040 IL15P40933 162 aaPredicted RBP18.86■□□□□ 0.61
SNIP1-202ENST00000468040 HSP90AB4PQ58FF6 505 aa18.86■□□□□ 0.61
SNIP1-202ENST00000468040 C7orf43Q8WVR3 580 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms