RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 PLA2G4AP47712 749 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 ATP7AQ04656 1500 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 NBPF1Q3BBV0 1214 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 C4orf17Q53FE4 359 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 C9orf84Q5VXU9 1444 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 CCDC141Q6ZP82 1450 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 FGD6Q6ZV73 1430 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 MIA2Q96PC5 1412 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 KIDINS220Q9ULH0 1771 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 PTPN23Q9H3S7 1636 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 INO80Q9ULG1 1556 aaPredicted RBP7.64□□□□□ -1.19
U2AF1-207ENST00000468039 A0A1B0GTH6 734 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 PSMA6P60900 246 aaKnown RBP7.64□□□□□ -1.19
U2AF1-207ENST00000468039 SWI5Q1ZZU3 235 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 AIDAQ96BJ3 306 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 GAS2L1Q99501 681 aaPredicted RBP7.64□□□□□ -1.19
U2AF1-207ENST00000468039 ZMIZ1Q9ULJ6 1067 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 DYRK1BQ9Y463 629 aa7.64□□□□□ -1.19
U2AF1-207ENST00000468039 PPP1R12BO60237 982 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-207ENST00000468039 TATP17735 454 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-207ENST00000468039 EPHA4P54764 986 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 FAM50AQ14320 339 aaKnown RBP7.63□□□□□ -1.19
U2AF1-207ENST00000468039 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 RIPOR1Q6ZS17 1223 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 PGBD3Q8N328 593 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 STK32AQ8WU08 396 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
U2AF1-207ENST00000468039 KRTAP4-9Q9BYQ8 210 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 TSPAN10Q9H1Z9 355 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-207ENST00000468039 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-207ENST00000468039 ARHGEF5Q12774 1597 aa7.63□□□□□ -1.19
U2AF1-207ENST00000468039 TCOF1Q13428 1488 aaKnown RBP7.62□□□□□ -1.19
U2AF1-207ENST00000468039 ATAD2Q6PL18 1390 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 BCORL1Q5H9F3 1711 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 ITGB7P26010 798 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 TEAD4Q15561 434 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 TMEM164Q5U3C3 297 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 VTI1AQ96AJ9 217 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 MADDQ8WXG6 1647 aa7.62□□□□□ -1.19
U2AF1-207ENST00000468039 ABCC5O15440 1437 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 H7C1W4 665 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 F11P03951 625 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 IGFBP4P22692 258 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 NOS2P35228 1153 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 PDE4CQ08493 712 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 C1orf216Q8TAB5 229 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 USP3Q9Y6I4 520 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 A2MP01023 1474 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 DAPK1P53355 1430 aa7.61□□□□□ -1.19
U2AF1-207ENST00000468039 ADAMTSL3P82987 1691 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 REREQ9P2R6 1566 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 LGR5O75473 907 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 TSPY4P0CV99 314 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 TSPY10P0CW01 314 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 BCRP11274 1271 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 NBPF11Q86T75 865 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 L3MBTL2Q969R5 705 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 SEMA6BQ9H3T3 888 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 GPAMQ9HCL2 828 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.6□□□□□ -1.19
U2AF1-207ENST00000468039 ZDHHC3Q9NYG2 299 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 PARP3Q9Y6F1 533 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 RTEL1-TNFRSF6BF6WH68 1400 aa7.6□□□□□ -1.19
U2AF1-207ENST00000468039 DNMT1P26358 1616 aaKnown RBP7.6□□□□□ -1.19
U2AF1-207ENST00000468039 PLXNC1O60486 1568 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 MSX1P28360 303 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 ITGAEP38570 1179 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 GMCL1Q96IK5 515 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 KRTAP4-2Q9BYR5 136 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 ZFP64Q9NPA5 681 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 LRRC4BQ9NT99 713 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 CROCC2H7BZ55 1655 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 RIMS1Q86UR5 1692 aaKnown RBP7.59□□□□□ -1.19
U2AF1-207ENST00000468039 ADGBQ8N7X0 1667 aa7.59□□□□□ -1.19
U2AF1-207ENST00000468039 MAST1Q9Y2H9 1570 aa7.59□□□□□ -1.2
U2AF1-207ENST00000468039 AGLP35573 1532 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 PTPRMP28827 1452 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 FOXO3O43524 673 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 PRMT3O60678 531 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 ARSJQ5FYB0 599 aaPredicted RBP7.58□□□□□ -1.2
U2AF1-207ENST00000468039 EFHC2Q5JST6 749 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 FOXR1Q6PIV2 292 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 BICDL1Q6ZP65 573 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 STAG2Q8N3U4 1231 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 USTQ9Y2C2 406 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 GJA3Q9Y6H8 435 aa7.58□□□□□ -1.2
U2AF1-207ENST00000468039 DHX29Q7Z478 1369 aaKnown RBP7.58□□□□□ -1.2
U2AF1-207ENST00000468039 SHANK2Q9UPX8 1470 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 FER1L4A9Z1Z3 1794 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 WEE1P30291 646 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 LBRQ14739 615 aaKnown RBP7.57□□□□□ -1.2
U2AF1-207ENST00000468039 GGT6Q6P531 493 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 NPM2Q86SE8 214 aaKnown RBP7.57□□□□□ -1.2
U2AF1-207ENST00000468039 TRIM22Q8IYM9 498 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms