RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 NOGQ13253 232 aa14.19□□□□□ -0.14
PRPF3-203ENST00000467514 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
PRPF3-203ENST00000467514 NUP98P52948 1817 aa14.19□□□□□ -0.14
PRPF3-203ENST00000467514 RGL2O15211 777 aa14.18□□□□□ -0.14
PRPF3-203ENST00000467514 MCM10Q7L590 875 aa14.18□□□□□ -0.14
PRPF3-203ENST00000467514 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
PRPF3-203ENST00000467514 HHIPL1Q96JK4 782 aa14.18□□□□□ -0.14
PRPF3-203ENST00000467514 NBPF26B4DH59 902 aa14.17□□□□□ -0.14
PRPF3-203ENST00000467514 GMPSP49915 693 aaPredicted RBP14.17□□□□□ -0.14
PRPF3-203ENST00000467514 HUNKP57058 714 aa14.17□□□□□ -0.14
PRPF3-203ENST00000467514 CRY2Q49AN0 593 aa14.17□□□□□ -0.14
PRPF3-203ENST00000467514 NBPF10Q6P3W6 841 aaKnown RBP14.17□□□□□ -0.14
PRPF3-203ENST00000467514 NBPF15Q8N660 670 aa14.17□□□□□ -0.14
PRPF3-203ENST00000467514 SNED1Q8TER0 1413 aa14.16□□□□□ -0.14
PRPF3-203ENST00000467514 ZNF853P0CG23 659 aa14.16□□□□□ -0.14
PRPF3-203ENST00000467514 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
PRPF3-203ENST00000467514 CDC37L1Q7L3B6 337 aa14.16□□□□□ -0.14
PRPF3-203ENST00000467514 ZNRF3Q9ULT6 936 aa14.16□□□□□ -0.14
PRPF3-203ENST00000467514 RAD17O75943 681 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 CXCL9Q07325 125 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 TNIP1Q15025 636 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 DPP8Q6V1X1 898 aaPredicted RBP14.15□□□□□ -0.14
PRPF3-203ENST00000467514 CRAMP1Q96RY5 1269 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 ZBTB3Q9H5J0 574 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 MYH16Q9H6N6 1097 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 DLG5Q8TDM6 1919 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 RIC1Q4ADV7 1423 aa14.15□□□□□ -0.14
PRPF3-203ENST00000467514 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.15
PRPF3-203ENST00000467514 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.15
PRPF3-203ENST00000467514 H7C1D1 291 aa14.14□□□□□ -0.15
PRPF3-203ENST00000467514 MYL6BP14649 208 aa14.14□□□□□ -0.15
PRPF3-203ENST00000467514 HOXA10P31260 410 aaPredicted RBP14.14□□□□□ -0.15
PRPF3-203ENST00000467514 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
PRPF3-203ENST00000467514 PPP1R42Q7Z4L9 355 aa14.14□□□□□ -0.15
PRPF3-203ENST00000467514 NLRP3Q96P20 1036 aa14.14□□□□□ -0.15
PRPF3-203ENST00000467514 CDHR2Q9BYE9 1310 aa14.14□□□□□ -0.15
PRPF3-203ENST00000467514 ERVV-1B6SEH8 477 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 HTATSF1O43719 755 aaKnown RBP14.13□□□□□ -0.15
PRPF3-203ENST00000467514 DCTN1Q14203 1278 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 PRPF38BQ5VTL8 546 aaKnown RBP14.13□□□□□ -0.15
PRPF3-203ENST00000467514 USP48Q86UV5 1035 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 SLC51AQ86UW1 340 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 C2orf69Q8N8R5 385 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 ZC3H15Q8WU90 426 aaKnown RBP14.13□□□□□ -0.15
PRPF3-203ENST00000467514 THUMPD2Q9BTF0 503 aaKnown RBP14.13□□□□□ -0.15
PRPF3-203ENST00000467514 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
PRPF3-203ENST00000467514 IBTKQ9P2D0 1353 aaPredicted RBP14.12□□□□□ -0.15
PRPF3-203ENST00000467514 NEFLP07196 543 aa14.12□□□□□ -0.15
PRPF3-203ENST00000467514 RRP1P56182 461 aaKnown RBP14.12□□□□□ -0.15
PRPF3-203ENST00000467514 SUSD4Q5VX71 490 aa14.12□□□□□ -0.15
PRPF3-203ENST00000467514 TRPM4Q8TD43 1214 aa14.12□□□□□ -0.15
PRPF3-203ENST00000467514 CNOT7Q9UIV1 285 aaKnown RBP14.12□□□□□ -0.15
PRPF3-203ENST00000467514 ATP6V0A2Q9Y487 856 aa14.12□□□□□ -0.15
PRPF3-203ENST00000467514 UBN2Q6ZU65 1347 aa14.12□□□□□ -0.15
PRPF3-203ENST00000467514 TRPA1O75762 1119 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 ZNF157P51786 506 aaPredicted RBP14.11□□□□□ -0.15
PRPF3-203ENST00000467514 TAF7Q15545 349 aaPredicted RBP14.11□□□□□ -0.15
PRPF3-203ENST00000467514 ERICH6BQ5W0A0 696 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 RGMBQ6NW40 437 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 TTLL7Q6ZT98 887 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 MPNDQ8N594 471 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 ZIC5Q96T25 663 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 SAGE1Q9NXZ1 904 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
PRPF3-203ENST00000467514 CT47B1P0C2W7 299 aaPredicted RBP14.1□□□□□ -0.15
PRPF3-203ENST00000467514 GNAI1P63096 354 aa14.1□□□□□ -0.15
PRPF3-203ENST00000467514 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
PRPF3-203ENST00000467514 MICALL2Q8IY33 904 aa14.1□□□□□ -0.15
PRPF3-203ENST00000467514 TSR2Q969E8 191 aaKnown RBP14.1□□□□□ -0.15
PRPF3-203ENST00000467514 CCDC102AQ96A19 550 aa14.1□□□□□ -0.15
PRPF3-203ENST00000467514 GBA2Q9HCG7 927 aaPredicted RBP14.1□□□□□ -0.15
PRPF3-203ENST00000467514 ABCC4O15439 1325 aa14.1□□□□□ -0.15
PRPF3-203ENST00000467514 NTSR2O95665 410 aa14.09□□□□□ -0.15
PRPF3-203ENST00000467514 KIF23Q02241 960 aaPredicted RBP14.09□□□□□ -0.15
PRPF3-203ENST00000467514 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
PRPF3-203ENST00000467514 DCPSQ96C86 337 aaKnown RBP14.09□□□□□ -0.15
PRPF3-203ENST00000467514 CHL1O00533 1208 aa14.08□□□□□ -0.16
PRPF3-203ENST00000467514 RARSP54136 660 aaKnown RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 HIRAP54198 1017 aaPredicted RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 KIAA2012Q0VF49 1180 aa14.08□□□□□ -0.16
PRPF3-203ENST00000467514 TBC1D10BQ4KMP7 808 aaPredicted RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 RBM26Q5T8P6 1007 aaKnown RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
PRPF3-203ENST00000467514 DDX46Q7L014 1031 aaKnown RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 CTU1Q7Z7A3 348 aaKnown RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
PRPF3-203ENST00000467514 PGAP2Q9UHJ9 254 aa14.08□□□□□ -0.16
PRPF3-203ENST00000467514 SHTN1A0MZ66 631 aa14.07□□□□□ -0.16
PRPF3-203ENST00000467514 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
PRPF3-203ENST00000467514 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
PRPF3-203ENST00000467514 RNF186Q9NXI6 227 aa14.07□□□□□ -0.16
PRPF3-203ENST00000467514 HDAC9Q9UKV0 1011 aa14.07□□□□□ -0.16
PRPF3-203ENST00000467514 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
PRPF3-203ENST00000467514 POLR2AP24928 1970 aaKnown RBP14.07□□□□□ -0.16
PRPF3-203ENST00000467514 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
PRPF3-203ENST00000467514 BBOX1O75936 387 aa14.06□□□□□ -0.16
PRPF3-203ENST00000467514 DLK2Q6UY11 383 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms