RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 GRIN3BO60391 1043 aa9.56□□□□□ -0.88
SND1-205ENST00000467238 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
SND1-205ENST00000467238 CRIPAKQ8N1N5 446 aa9.56□□□□□ -0.88
SND1-205ENST00000467238 AFDNP55196 1824 aaKnown RBP9.56□□□□□ -0.88
SND1-205ENST00000467238 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
SND1-205ENST00000467238 SIPA1L3O60292 1781 aaPredicted RBP9.55□□□□□ -0.88
SND1-205ENST00000467238 COL3A1P02461 1466 aaPredicted RBP9.55□□□□□ -0.88
SND1-205ENST00000467238 NPC1L1Q9UHC9 1359 aa9.55□□□□□ -0.88
SND1-205ENST00000467238 PADI6Q6TGC4 694 aa9.55□□□□□ -0.88
SND1-205ENST00000467238 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
SND1-205ENST00000467238 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
SND1-205ENST00000467238 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
SND1-205ENST00000467238 AKAP4Q5JQC9 854 aa9.54□□□□□ -0.88
SND1-205ENST00000467238 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
SND1-205ENST00000467238 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
SND1-205ENST00000467238 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
SND1-205ENST00000467238 RPS6KA4O75676 772 aa9.53□□□□□ -0.88
SND1-205ENST00000467238 MMP10P09238 476 aa9.53□□□□□ -0.88
SND1-205ENST00000467238 HMOX1P09601 288 aa9.53□□□□□ -0.88
SND1-205ENST00000467238 SBF1O95248 1867 aa9.53□□□□□ -0.88
SND1-205ENST00000467238 KCPQ6ZWJ8 1503 aa9.52□□□□□ -0.88
SND1-205ENST00000467238 DIAPH1O60610 1272 aaKnown RBP9.52□□□□□ -0.89
SND1-205ENST00000467238 GYS1P13807 737 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 CCDC88AQ3V6T2 1871 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 C10orf71Q711Q0 1435 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 SLC52A2Q9HAB3 445 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 LGR6Q9HBX8 967 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 PXDNLA1KZ92 1463 aa9.52□□□□□ -0.89
SND1-205ENST00000467238 ADCY9O60503 1353 aa9.51□□□□□ -0.89
SND1-205ENST00000467238 RNMTO43148 476 aaKnown RBP9.51□□□□□ -0.89
SND1-205ENST00000467238 AVPP01185 164 aa9.51□□□□□ -0.89
SND1-205ENST00000467238 RFC4P35249 363 aa9.51□□□□□ -0.89
SND1-205ENST00000467238 CRKLP46109 303 aaKnown RBP9.51□□□□□ -0.89
SND1-205ENST00000467238 INSM1Q01101 510 aaPredicted RBP9.51□□□□□ -0.89
SND1-205ENST00000467238 DLG5Q8TDM6 1919 aa9.5□□□□□ -0.89
SND1-205ENST00000467238 PCNTO95613 3336 aa9.5□□□□□ -0.89
SND1-205ENST00000467238 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
SND1-205ENST00000467238 C1QTNF8P60827 252 aa9.5□□□□□ -0.89
SND1-205ENST00000467238 FOXC1Q12948 553 aa9.5□□□□□ -0.89
SND1-205ENST00000467238 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
SND1-205ENST00000467238 WWC3Q9ULE0 1092 aa9.5□□□□□ -0.89
SND1-205ENST00000467238 NRXN2Q9P2S2 1712 aa9.49□□□□□ -0.89
SND1-205ENST00000467238 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
SND1-205ENST00000467238 TGFB2P61812 414 aa9.49□□□□□ -0.89
SND1-205ENST00000467238 SLC39A6Q13433 755 aa9.49□□□□□ -0.89
SND1-205ENST00000467238 INTS5Q6P9B9 1019 aaKnown RBP9.49□□□□□ -0.89
SND1-205ENST00000467238 DNAJC10Q8IXB1 793 aa9.49□□□□□ -0.89
SND1-205ENST00000467238 SRP68Q9UHB9 627 aaKnown RBP9.49□□□□□ -0.89
SND1-205ENST00000467238 DLEC1Q9Y238 1755 aa9.49□□□□□ -0.89
SND1-205ENST00000467238 USP42Q9H9J4 1324 aaKnown RBP9.49□□□□□ -0.89
SND1-205ENST00000467238 CNGB1Q14028 1251 aaPredicted RBP9.48□□□□□ -0.89
SND1-205ENST00000467238 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
SND1-205ENST00000467238 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
SND1-205ENST00000467238 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
SND1-205ENST00000467238 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
SND1-205ENST00000467238 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
SND1-205ENST00000467238 ADH1BP00325 375 aa9.47□□□□□ -0.89
SND1-205ENST00000467238 CYP19A1P11511 503 aaPredicted RBP9.47□□□□□ -0.89
SND1-205ENST00000467238 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
SND1-205ENST00000467238 SCN7AQ01118 1682 aa9.46□□□□□ -0.89
SND1-205ENST00000467238 A0A0G2JLW4 131 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 U2SURPO15042 1029 aaKnown RBP9.46□□□□□ -0.9
SND1-205ENST00000467238 AXIN1O15169 862 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 DDR1Q08345 913 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 ZBTB1Q9Y2K1 713 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 CACNA1SQ13698 1873 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 COL15A1P39059 1388 aa9.46□□□□□ -0.9
SND1-205ENST00000467238 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 SENP3-EIF4A1A0A087X0R7 540 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 POLRMTO00411 1230 aaKnown RBP9.45□□□□□ -0.9
SND1-205ENST00000467238 DPEP1P16444 411 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 KCNA3P22001 575 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 IL17REQ8NFR9 667 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 GPBP1L1Q9HC44 474 aaPredicted RBP9.45□□□□□ -0.9
SND1-205ENST00000467238 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
SND1-205ENST00000467238 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
SND1-205ENST00000467238 TM4SF1P30408 202 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 USPL1Q5W0Q7 1092 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 TTC5Q8N0Z6 440 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 SLC6A16Q9GZN6 736 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 NARFQ9UHQ1 456 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 CEMIPQ8WUJ3 1361 aa9.44□□□□□ -0.9
SND1-205ENST00000467238 HEG1Q9ULI3 1381 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 FCHSD2O94868 740 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 PPP2R1AP30153 589 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 TEFQ10587 303 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 ZNF790Q6PG37 636 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 ZNF496Q96IT1 587 aaPredicted RBP9.43□□□□□ -0.9
SND1-205ENST00000467238 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 CFAP53Q96M91 514 aa9.43□□□□□ -0.9
SND1-205ENST00000467238 FER1L6Q2WGJ9 1857 aa9.42□□□□□ -0.9
SND1-205ENST00000467238 COL11A2P13942 1736 aaPredicted RBP9.42□□□□□ -0.9
SND1-205ENST00000467238 TESPA1A2RU30 521 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms