RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 PSMD1Q99460 953 aa23.78■■□□□ 1.4
PDE6B-206ENST00000467152 MYD88Q99836 296 aa23.78■■□□□ 1.4
PDE6B-206ENST00000467152 HACL1Q9UJ83 578 aa23.78■■□□□ 1.4
PDE6B-206ENST00000467152 RNF123Q5XPI4 1314 aa23.78■■□□□ 1.4
PDE6B-206ENST00000467152 CNTNAP1P78357 1384 aa23.78■■□□□ 1.4
PDE6B-206ENST00000467152 GRIPAP1Q4V328 841 aa23.77■■□□□ 1.4
PDE6B-206ENST00000467152 C3orf67Q6ZVT6 689 aa23.77■■□□□ 1.4
PDE6B-206ENST00000467152 FZD9O00144 591 aa23.76■■□□□ 1.39
PDE6B-206ENST00000467152 SH3TC1Q8TE82 1336 aa23.76■■□□□ 1.39
PDE6B-206ENST00000467152 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
PDE6B-206ENST00000467152 HOXA10P31260 410 aaPredicted RBP23.75■■□□□ 1.39
PDE6B-206ENST00000467152 HNRNPUQ00839 825 aaKnown RBP eCLIP23.75■■□□□ 1.39
PDE6B-206ENST00000467152 OLFM4Q6UX06 510 aa23.75■■□□□ 1.39
PDE6B-206ENST00000467152 PNMA8AQ86V59 439 aaPredicted RBP23.75■■□□□ 1.39
PDE6B-206ENST00000467152 GPC2Q8N158 579 aa23.75■■□□□ 1.39
PDE6B-206ENST00000467152 CCDC191Q8NCU4 936 aa23.75■■□□□ 1.39
PDE6B-206ENST00000467152 RPGRQ92834 1020 aaKnown RBP23.75■■□□□ 1.39
PDE6B-206ENST00000467152 FAM89AQ96GI7 184 aa23.75■■□□□ 1.39
PDE6B-206ENST00000467152 NLRP3Q96P20 1036 aa23.75■■□□□ 1.39
PDE6B-206ENST00000467152 MKRN1Q9UHC7 482 aaKnown RBP23.75■■□□□ 1.39
PDE6B-206ENST00000467152 LAMB2P55268 1798 aa23.75■■□□□ 1.39
PDE6B-206ENST00000467152 IGKV5-2P06315 115 aa23.74■■□□□ 1.39
PDE6B-206ENST00000467152 EPHX2P34913 555 aa23.74■■□□□ 1.39
PDE6B-206ENST00000467152 JDP2Q8WYK2 163 aa23.74■■□□□ 1.39
PDE6B-206ENST00000467152 FKBP5Q13451 457 aaPredicted RBP23.73■■□□□ 1.39
PDE6B-206ENST00000467152 EAPPQ56P03 285 aaPredicted RBP23.73■■□□□ 1.39
PDE6B-206ENST00000467152 TRPM7Q96QT4 1865 aa23.73■■□□□ 1.39
PDE6B-206ENST00000467152 TMEM88BA6NKF7 163 aa23.72■■□□□ 1.39
PDE6B-206ENST00000467152 CWC25Q9NXE8 425 aaPredicted RBP23.72■■□□□ 1.39
PDE6B-206ENST00000467152 COL4A5P29400 1685 aa23.71■■□□□ 1.39
PDE6B-206ENST00000467152 ITGBL1O95965 494 aaPredicted RBP23.71■■□□□ 1.39
PDE6B-206ENST00000467152 MRPL50Q8N5N7 158 aaKnown RBP23.71■■□□□ 1.39
PDE6B-206ENST00000467152 ZBTB38Q8NAP3 1195 aaPredicted RBP23.71■■□□□ 1.39
PDE6B-206ENST00000467152 DNAAF4Q8WXU2 420 aa23.71■■□□□ 1.39
PDE6B-206ENST00000467152 LTBP1Q14766 1721 aa23.7■■□□□ 1.39
PDE6B-206ENST00000467152 NEXNQ0ZGT2 675 aa23.7■■□□□ 1.38
PDE6B-206ENST00000467152 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
PDE6B-206ENST00000467152 SSH1Q8WYL5 1049 aa23.7■■□□□ 1.38
PDE6B-206ENST00000467152 RBM17Q96I25 401 aaKnown RBP23.7■■□□□ 1.38
PDE6B-206ENST00000467152 CRAMP1Q96RY5 1269 aa23.7■■□□□ 1.38
PDE6B-206ENST00000467152 PCCAP05165 728 aaPredicted RBP23.69■■□□□ 1.38
PDE6B-206ENST00000467152 EIF6P56537 245 aaKnown RBP23.69■■□□□ 1.38
PDE6B-206ENST00000467152 JARID2Q92833 1246 aaPredicted RBP23.69■■□□□ 1.38
PDE6B-206ENST00000467152 CLEC11AQ9Y240 323 aa23.69■■□□□ 1.38
PDE6B-206ENST00000467152 NEURL1BA8MQ27 555 aa23.68■■□□□ 1.38
PDE6B-206ENST00000467152 F6X3S4 739 aa23.68■■□□□ 1.38
PDE6B-206ENST00000467152 IRS4O14654 1257 aaPredicted RBP23.68■■□□□ 1.38
PDE6B-206ENST00000467152 CAPN15O75808 1086 aa23.68■■□□□ 1.38
PDE6B-206ENST00000467152 CWF19L2Q2TBE0 894 aaKnown RBP23.68■■□□□ 1.38
PDE6B-206ENST00000467152 THSD7BQ9C0I4 1608 aa23.68■■□□□ 1.38
PDE6B-206ENST00000467152 CT47B1P0C2W7 299 aaPredicted RBP23.67■■□□□ 1.38
PDE6B-206ENST00000467152 PPEF1O14829 653 aaPredicted RBP23.66■■□□□ 1.38
PDE6B-206ENST00000467152 LMOD1P29536 600 aaPredicted RBP23.66■■□□□ 1.38
PDE6B-206ENST00000467152 SF3B3Q15393 1217 aaKnown RBP23.66■■□□□ 1.38
PDE6B-206ENST00000467152 ALDH1L2Q3SY69 923 aa23.66■■□□□ 1.38
PDE6B-206ENST00000467152 LINS1Q8NG48 757 aa23.66■■□□□ 1.38
PDE6B-206ENST00000467152 H7C1W4 665 aa23.65■■□□□ 1.38
PDE6B-206ENST00000467152 CNTROBQ8N137 903 aa23.65■■□□□ 1.38
PDE6B-206ENST00000467152 LARGE2Q8N3Y3 721 aa23.65■■□□□ 1.38
PDE6B-206ENST00000467152 AIDAQ96BJ3 306 aa23.65■■□□□ 1.38
PDE6B-206ENST00000467152 TMX4Q9H1E5 349 aaPredicted RBP23.65■■□□□ 1.38
PDE6B-206ENST00000467152 GCKRQ14397 625 aa23.64■■□□□ 1.37
PDE6B-206ENST00000467152 BEND3Q5T5X7 828 aa23.64■■□□□ 1.37
PDE6B-206ENST00000467152 RASSF10A6NK89 507 aa23.63■■□□□ 1.37
PDE6B-206ENST00000467152 VEGFBP49765 207 aa23.63■■□□□ 1.37
PDE6B-206ENST00000467152 BCL2L13Q9BXK5 485 aa23.63■■□□□ 1.37
PDE6B-206ENST00000467152 VPS33BQ9H267 617 aa23.63■■□□□ 1.37
PDE6B-206ENST00000467152 PRDM10Q9NQV6 1147 aa23.63■■□□□ 1.37
PDE6B-206ENST00000467152 GJA3Q9Y6H8 435 aa23.63■■□□□ 1.37
PDE6B-206ENST00000467152 ABCC4O15439 1325 aa23.62■■□□□ 1.37
PDE6B-206ENST00000467152 CDHR2Q9BYE9 1310 aa23.62■■□□□ 1.37
PDE6B-206ENST00000467152 LRRC37AA6NMS7 1700 aa23.62■■□□□ 1.37
PDE6B-206ENST00000467152 FOXN1O15353 648 aa23.62■■□□□ 1.37
PDE6B-206ENST00000467152 HSP90B1P14625 803 aaKnown RBP23.62■■□□□ 1.37
PDE6B-206ENST00000467152 MAP1SQ66K74 1059 aaPredicted RBP23.62■■□□□ 1.37
PDE6B-206ENST00000467152 DDX46Q7L014 1031 aaKnown RBP23.62■■□□□ 1.37
PDE6B-206ENST00000467152 NIM1KQ8IY84 436 aa23.62■■□□□ 1.37
PDE6B-206ENST00000467152 ZBED9Q6R2W3 1325 aa23.61■■□□□ 1.37
PDE6B-206ENST00000467152 PDE8AO60658 829 aa23.61■■□□□ 1.37
PDE6B-206ENST00000467152 BBOX1O75936 387 aa23.61■■□□□ 1.37
PDE6B-206ENST00000467152 CTCFP49711 727 aaPredicted RBP23.61■■□□□ 1.37
PDE6B-206ENST00000467152 DDX60Q8IY21 1712 aaKnown RBP23.61■■□□□ 1.37
PDE6B-206ENST00000467152 SCNN1DP51172 638 aa23.6■■□□□ 1.37
PDE6B-206ENST00000467152 RARSP54136 660 aaKnown RBP23.6■■□□□ 1.37
PDE6B-206ENST00000467152 CASP7P55210 303 aa23.6■■□□□ 1.37
PDE6B-206ENST00000467152 SMC4Q9NTJ3 1288 aa23.6■■□□□ 1.37
PDE6B-206ENST00000467152 ATP6V0A2Q9Y487 856 aa23.6■■□□□ 1.37
PDE6B-206ENST00000467152 BRPF1P55201 1214 aaPredicted RBP23.59■■□□□ 1.37
PDE6B-206ENST00000467152 GRAPQ13588 217 aa23.59■■□□□ 1.37
PDE6B-206ENST00000467152 DEFB115Q30KQ5 88 aa23.59■■□□□ 1.37
PDE6B-206ENST00000467152 USP50Q70EL3 339 aaPredicted RBP23.59■■□□□ 1.37
PDE6B-206ENST00000467152 UBE3BQ7Z3V4 1068 aa23.59■■□□□ 1.37
PDE6B-206ENST00000467152 SLC51AQ86UW1 340 aa23.59■■□□□ 1.37
PDE6B-206ENST00000467152 SUPT20HQ8NEM7 779 aa23.59■■□□□ 1.37
PDE6B-206ENST00000467152 GRAPLQ8TC17 118 aaPredicted RBP23.59■■□□□ 1.37
PDE6B-206ENST00000467152 PTPRCP08575 1304 aa23.59■■□□□ 1.37
PDE6B-206ENST00000467152 PPIP5K2O43314 1243 aa23.58■■□□□ 1.37
PDE6B-206ENST00000467152 SLC4A10Q6U841 1118 aa23.58■■□□□ 1.37
PDE6B-206ENST00000467152 WBP1LQ9NX94 342 aa23.58■■□□□ 1.37
PDE6B-206ENST00000467152 TAF1P21675 1872 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms