RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ATF3P18847 181 aa21.33■■□□□ 1.01
SNAPC3-205ENST00000467062 CASTP20810 708 aaKnown RBP21.33■■□□□ 1.01
SNAPC3-205ENST00000467062 PHKG2P15735 406 aa21.33■■□□□ 1
SNAPC3-205ENST00000467062 EDC3Q96F86 508 aaKnown RBP21.33■■□□□ 1
SNAPC3-205ENST00000467062 NDUFB9Q9Y6M9 179 aa21.33■■□□□ 1
SNAPC3-205ENST00000467062 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
SNAPC3-205ENST00000467062 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 1
SNAPC3-205ENST00000467062 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 RUFY3Q7L099 469 aa21.32■■□□□ 1
SNAPC3-205ENST00000467062 INTS4Q96HW7 963 aaKnown RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 FEZ2Q9UHY8 353 aaPredicted RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 LARGE1O95461 756 aa21.32■■□□□ 1
SNAPC3-205ENST00000467062 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 CCDC9Q9Y3X0 531 aaKnown RBP21.32■■□□□ 1
SNAPC3-205ENST00000467062 KDM3BQ7LBC6 1761 aa21.32■■□□□ 1
SNAPC3-205ENST00000467062 TNNT1P13805 278 aa21.31■■□□□ 1
SNAPC3-205ENST00000467062 SPC24Q8NBT2 197 aa21.31■■□□□ 1
SNAPC3-205ENST00000467062 YY1AP1Q9H869 796 aa21.31■■□□□ 1
SNAPC3-205ENST00000467062 CYP27B1O15528 508 aa21.31■■□□□ 1
SNAPC3-205ENST00000467062 TMEM87AQ8NBN3 555 aa21.31■■□□□ 1
SNAPC3-205ENST00000467062 TTC41PQ6P2S7 1318 aa21.3■■□□□ 1
SNAPC3-205ENST00000467062 TUBGCP6Q96RT7 1819 aa21.3■■□□□ 1
SNAPC3-205ENST00000467062 KDM6AO15550 1401 aaPredicted RBP21.29■■□□□ 1
SNAPC3-205ENST00000467062 NEURL1BA8MQ27 555 aa21.29■■□□□ 1
SNAPC3-205ENST00000467062 CHGBP05060 677 aa21.29■■□□□ 1
SNAPC3-205ENST00000467062 C16orf45Q96MC5 204 aaPredicted RBP21.29■■□□□ 1
SNAPC3-205ENST00000467062 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
SNAPC3-205ENST00000467062 TTC14Q96N46 770 aa21.29■■□□□ 1
SNAPC3-205ENST00000467062 CYP2C19P33261 490 aa21.29■■□□□ 1
SNAPC3-205ENST00000467062 TNNT3P45378 269 aaPredicted RBP21.29■■□□□ 1
SNAPC3-205ENST00000467062 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
SNAPC3-205ENST00000467062 WDR33Q9C0J8 1336 aaKnown RBP21.28■■□□□ 1
SNAPC3-205ENST00000467062 CERS3Q8IU89 383 aa21.28■■□□□ 1
SNAPC3-205ENST00000467062 SLIT3O75094 1523 aa21.28■■□□□ 1
SNAPC3-205ENST00000467062 GCKRQ14397 625 aa21.28■■□□□ 1
SNAPC3-205ENST00000467062 ANKRD13DQ6ZTN6 518 aa21.28■■□□□ 1
SNAPC3-205ENST00000467062 TMEM94Q12767 1356 aa21.28■■□□□ 1
SNAPC3-205ENST00000467062 LMO7Q8WWI1 1683 aa21.28■■□□□ 1
SNAPC3-205ENST00000467062 HNRNPH2P55795 449 aaKnown RBP21.27■■□□□ 1
SNAPC3-205ENST00000467062 NEXNQ0ZGT2 675 aa21.27■■□□□ 1
SNAPC3-205ENST00000467062 NMIQ13287 307 aaPredicted RBP21.27■■□□□ 1
SNAPC3-205ENST00000467062 NAA30Q147X3 362 aaPredicted RBP21.27■■□□□ 1
SNAPC3-205ENST00000467062 KMT5BQ4FZB7 885 aa21.27■■□□□ 1
SNAPC3-205ENST00000467062 LARP1Q6PKG0 1096 aaKnown RBP21.27■■□□□ 1
SNAPC3-205ENST00000467062 NOL10Q9BSC4 688 aaKnown RBP21.27■■□□□ 1
SNAPC3-205ENST00000467062 NCAPD2Q15021 1401 aa21.27■■□□□ 1
SNAPC3-205ENST00000467062 USP42Q9H9J4 1324 aaKnown RBP21.27■■□□□ 1
SNAPC3-205ENST00000467062 IFNL2Q8IZJ0 200 aa21.27■□□□□ 0.99
SNAPC3-205ENST00000467062 TTC5Q8N0Z6 440 aa21.27■□□□□ 0.99
SNAPC3-205ENST00000467062 GPATCH3Q96I76 525 aa21.27■□□□□ 0.99
SNAPC3-205ENST00000467062 TAF6LQ9Y6J9 622 aa21.27■□□□□ 0.99
SNAPC3-205ENST00000467062 MEGF6O75095 1541 aa21.26■□□□□ 0.99
SNAPC3-205ENST00000467062 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
SNAPC3-205ENST00000467062 ERC1Q8IUD2 1116 aa21.26■□□□□ 0.99
SNAPC3-205ENST00000467062 CCDC83Q8IWF9 413 aa21.26■□□□□ 0.99
SNAPC3-205ENST00000467062 AP5Z1O43299 807 aa21.26■□□□□ 0.99
SNAPC3-205ENST00000467062 PTGS1P23219 599 aa21.26■□□□□ 0.99
SNAPC3-205ENST00000467062 UBE2HP62256 183 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 SLFNL1Q499Z3 407 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 NECAB1Q8N987 351 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 SECISBP2LQ93073 1101 aaKnown RBP21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 EVI5LQ96CN4 794 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 FUCA2Q9BTY2 467 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 RGPD5Q99666 1765 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 A0A0D9SFI3 127 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 HSPA2P54652 639 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 IL17RAQ96F46 866 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 LIMCH1Q9UPQ0 1083 aa21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.25■□□□□ 0.99
SNAPC3-205ENST00000467062 TRERF1Q96PN7 1200 aa21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 RAD51AP2Q09MP3 1159 aa21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 RUFY2Q8WXA3 655 aa21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 METTL22Q9BUU2 404 aaPredicted RBP21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 GEMIN8Q9NWZ8 242 aaKnown RBP21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 CNPY2Q9Y2B0 182 aa21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 RBM8AQ9Y5S9 174 aaKnown RBP21.24■□□□□ 0.99
SNAPC3-205ENST00000467062 SYT1P21579 422 aa21.23■□□□□ 0.99
SNAPC3-205ENST00000467062 PDRG1Q9NUG6 133 aa21.23■□□□□ 0.99
SNAPC3-205ENST00000467062 RPAP1Q9BWH6 1393 aaPredicted RBP21.23■□□□□ 0.99
SNAPC3-205ENST00000467062 SNRPA1P09661 255 aaKnown RBP21.23■□□□□ 0.99
SNAPC3-205ENST00000467062 CABP4P57796 275 aa21.23■□□□□ 0.99
SNAPC3-205ENST00000467062 UTYO14607 1347 aa21.23■□□□□ 0.99
SNAPC3-205ENST00000467062 LRP10Q7Z4F1 713 aa21.22■□□□□ 0.99
SNAPC3-205ENST00000467062 RBM6P78332 1123 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-205ENST00000467062 BMS1Q14692 1282 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-205ENST00000467062 TPD52L1Q16890 204 aaPredicted RBP21.22■□□□□ 0.99
SNAPC3-205ENST00000467062 ZNF589Q86UQ0 364 aaPredicted RBP21.22■□□□□ 0.99
SNAPC3-205ENST00000467062 TFCP2Q12800 502 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 NECTIN1Q15223 517 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 RNF20Q5VTR2 975 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 CEP135Q66GS9 1140 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 CCDC171Q6TFL3 1326 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 N4BP2Q86UW6 1770 aaPredicted RBP21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 SMC3Q9UQE7 1217 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 CHMP3Q9Y3E7 222 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 A0A087WZG4 1122 aa21.21■□□□□ 0.99
SNAPC3-205ENST00000467062 CREB3L3Q68CJ9 461 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms