RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 LRFN2Q9ULH4 789 aa8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 OPLAHO14841 1288 aa8.46□□□□□ -1.06
CHMP2B-202ENST00000466696 SASH3O75995 380 aa8.46□□□□□ -1.06
CHMP2B-202ENST00000466696 RARAP10276 462 aa8.46□□□□□ -1.06
CHMP2B-202ENST00000466696 CPB1P15086 417 aa8.46□□□□□ -1.06
CHMP2B-202ENST00000466696 PRIMPOLQ96LW4 560 aa8.46□□□□□ -1.06
CHMP2B-202ENST00000466696 PRMT3O60678 531 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 EGFRP00533 1210 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 GPLD1P80108 840 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 NRG1Q02297 640 aaPredicted RBP8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 RSPO4Q2I0M5 234 aaPredicted RBP8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 COX20Q5RI15 118 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 TREML1Q86YW5 311 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 TPSG1Q9NRR2 321 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 ZMIZ1Q9ULJ6 1067 aa8.45□□□□□ -1.06
CHMP2B-202ENST00000466696 SELPP16109 830 aa8.44□□□□□ -1.06
CHMP2B-202ENST00000466696 ELMSAN1Q6PJG2 1045 aa8.44□□□□□ -1.06
CHMP2B-202ENST00000466696 DMRTC2Q8IXT2 367 aaPredicted RBP8.44□□□□□ -1.06
CHMP2B-202ENST00000466696 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
CHMP2B-202ENST00000466696 LPIN3Q9BQK8 851 aa8.44□□□□□ -1.06
CHMP2B-202ENST00000466696 ZBTB42B2RXF5 422 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 XYLBO75191 536 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 NRLP54845 237 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 ADGRE1Q14246 886 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 OCLNQ16625 522 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 NKAPLQ5M9Q1 402 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 PERM1Q5SV97 790 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 XP32Q5T750 250 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 ILDR2Q71H61 639 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 RGL4Q8IZJ4 473 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 CMTR1Q8N1G2 835 aaKnown RBP8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 DTWD1Q8N5C7 304 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 TTC9Q92623 222 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 COL26A1Q96A83 441 aa8.43□□□□□ -1.06
CHMP2B-202ENST00000466696 ATG7O95352 703 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 BRD2P25440 801 aaKnown RBP8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 ITGB7P26010 798 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 FAM69CQ0P6D2 419 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 STK32AQ8WU08 396 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 USP20Q9Y2K6 914 aa8.42□□□□□ -1.06
CHMP2B-202ENST00000466696 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.41□□□□□ -1.06
CHMP2B-202ENST00000466696 SRPK2P78362 688 aaKnown RBP8.41□□□□□ -1.06
CHMP2B-202ENST00000466696 MLLT1Q03111 559 aaPredicted RBP8.41□□□□□ -1.06
CHMP2B-202ENST00000466696 TXNRD3Q86VQ6 643 aa8.41□□□□□ -1.06
CHMP2B-202ENST00000466696 Q8N3U1 123 aa8.41□□□□□ -1.06
CHMP2B-202ENST00000466696 PSAPP07602 524 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 PLAURQ03405 335 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 GRIK5Q16478 980 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 SHISA2Q6UWI4 295 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 WFDC8Q8IUA0 241 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 ZMYND15Q9H091 742 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 KCNMB2Q9Y691 235 aa8.4□□□□□ -1.06
CHMP2B-202ENST00000466696 DYRK3O43781 588 aa8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 PTCD1O75127 700 aaKnown RBP8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 EIF2AK2P19525 551 aaKnown RBP8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 FBXO11Q86XK2 927 aa8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 ETFBKMTQ8IXQ9 262 aa8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 SAP130Q9H0E3 1048 aa8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 SMG9Q9H0W8 520 aaKnown RBP8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 CXXC1Q9P0U4 656 aaPredicted RBP8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 USP21Q9UK80 565 aa8.39□□□□□ -1.07
CHMP2B-202ENST00000466696 SOX18P35713 384 aa8.38□□□□□ -1.07
CHMP2B-202ENST00000466696 TMEM164Q5U3C3 297 aa8.38□□□□□ -1.07
CHMP2B-202ENST00000466696 HFE2Q6ZVN8 426 aa8.38□□□□□ -1.07
CHMP2B-202ENST00000466696 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
CHMP2B-202ENST00000466696 MMP20O60882 483 aa8.37□□□□□ -1.07
CHMP2B-202ENST00000466696 SIK1P57059 783 aa8.37□□□□□ -1.07
CHMP2B-202ENST00000466696 ZMYM1Q5SVZ6 1142 aa8.37□□□□□ -1.07
CHMP2B-202ENST00000466696 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
CHMP2B-202ENST00000466696 RBSNQ9H1K0 784 aa8.37□□□□□ -1.07
CHMP2B-202ENST00000466696 GHRHP01286 108 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 H2AFB2P0C5Z0 115 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 HOXD8P13378 290 aaPredicted RBP8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 NLRP13Q86W25 1043 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 PIK3R5Q8WYR1 880 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 CLP1Q92989 425 aaKnown RBP8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 PBXIP1Q96AQ6 731 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 PLD4Q96BZ4 506 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 MKNK1Q9BUB5 465 aa8.36□□□□□ -1.07
CHMP2B-202ENST00000466696 IGF2-ASQ6U949 168 aa8.35□□□□□ -1.07
CHMP2B-202ENST00000466696 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
CHMP2B-202ENST00000466696 J3QW42 95 aa8.34□□□□□ -1.07
CHMP2B-202ENST00000466696 TNFRSF10BO14763 440 aa8.34□□□□□ -1.07
CHMP2B-202ENST00000466696 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
CHMP2B-202ENST00000466696 CAPN12Q6ZSI9 719 aa8.34□□□□□ -1.07
CHMP2B-202ENST00000466696 NSUN5Q96P11 429 aaKnown RBP8.34□□□□□ -1.07
CHMP2B-202ENST00000466696 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
CHMP2B-202ENST00000466696 UBAP1LF5GYI3 381 aa8.33□□□□□ -1.08
CHMP2B-202ENST00000466696 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
CHMP2B-202ENST00000466696 PRSS36Q5K4E3 855 aa8.33□□□□□ -1.08
CHMP2B-202ENST00000466696 TP53INP1Q96A56 240 aa8.33□□□□□ -1.08
CHMP2B-202ENST00000466696 STIM2Q9P246 746 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms