RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 PRDM11Q9NQV5 511 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 TAF5LO75529 589 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 PSMA5P28066 241 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 ATP6V1DQ9Y5K8 247 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 COL15A1P39059 1388 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 PHF14O94880 888 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 ATP5JP18859 108 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 TIMM10P62072 90 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 UBE2HP62256 183 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 CDC37L1Q7L3B6 337 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 LRRC2Q9BYS8 371 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
UFD1-206ENST00000466373 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 RPS6KB1P23443 525 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 RABL6Q3YEC7 729 aaPredicted RBP12.42□□□□□ -0.42
UFD1-206ENST00000466373 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 TMEM87AQ8NBN3 555 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 ZNF594Q96JF6 807 aaPredicted RBP12.42□□□□□ -0.42
UFD1-206ENST00000466373 COL18A1P39060 1754 aa12.42□□□□□ -0.42
UFD1-206ENST00000466373 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
UFD1-206ENST00000466373 TOB2Q14106 344 aaPredicted RBP12.41□□□□□ -0.42
UFD1-206ENST00000466373 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
UFD1-206ENST00000466373 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
UFD1-206ENST00000466373 CASP7P55210 303 aa12.41□□□□□ -0.42
UFD1-206ENST00000466373 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
UFD1-206ENST00000466373 STRN4Q9NRL3 753 aa12.41□□□□□ -0.42
UFD1-206ENST00000466373 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
UFD1-206ENST00000466373 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
UFD1-206ENST00000466373 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
UFD1-206ENST00000466373 GOLIM4O00461 696 aa12.4□□□□□ -0.42
UFD1-206ENST00000466373 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
UFD1-206ENST00000466373 SNRKQ9NRH2 765 aa12.4□□□□□ -0.42
UFD1-206ENST00000466373 ZNF609O15014 1411 aa12.4□□□□□ -0.42
UFD1-206ENST00000466373 FOXO4P98177 505 aa12.4□□□□□ -0.42
UFD1-206ENST00000466373 USP25Q9UHP3 1055 aa12.4□□□□□ -0.42
UFD1-206ENST00000466373 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
UFD1-206ENST00000466373 JAK2O60674 1132 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 LRRC24Q50LG9 513 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
UFD1-206ENST00000466373 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 PPFIA3O75145 1194 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 CYP21A2P08686 494 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
UFD1-206ENST00000466373 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
UFD1-206ENST00000466373 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 DDX11Q96FC9 970 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 HAUS7Q99871 368 aa12.39□□□□□ -0.43
UFD1-206ENST00000466373 H7C1W4 665 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 FGD1P98174 961 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 ANKRD1Q15327 319 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 MCMDC2Q4G0Z9 681 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 Q6ZUG5 572 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 TTC6Q86TZ1 520 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 FOSBP53539 338 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 HS1BP3Q53T59 392 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
UFD1-206ENST00000466373 ZKSCAN5Q9Y2L8 839 aa12.38□□□□□ -0.43
UFD1-206ENST00000466373 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 CAMK4Q16566 473 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 ZNF830Q96NB3 372 aaPredicted RBP12.37□□□□□ -0.43
UFD1-206ENST00000466373 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 MRC1P22897 1456 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 KRT85P78386 507 aa12.37□□□□□ -0.43
UFD1-206ENST00000466373 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 BRF1Q92994 677 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 PAG1Q9NWQ8 432 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 CCDC39Q9UFE4 941 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
UFD1-206ENST00000466373 PDCP20941 246 aa12.36□□□□□ -0.43
UFD1-206ENST00000466373 CPDO75976 1380 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 OFD1O75665 1012 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 LIG1P18858 919 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 FKBP4Q02790 459 aaKnown RBP eCLIP12.35□□□□□ -0.43
UFD1-206ENST00000466373 KRT32Q14532 448 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 TSGA10IPQ3SY00 556 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 CHST3Q7LGC8 479 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
UFD1-206ENST00000466373 JCADQ9P266 1359 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 ADCY5O95622 1261 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 IL2RBP14784 551 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 EVA1CP58658 441 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 GTF3C6Q969F1 213 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 R3HCC1Q9Y3T6 440 aaKnown RBP12.35□□□□□ -0.43
UFD1-206ENST00000466373 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
UFD1-206ENST00000466373 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
UFD1-206ENST00000466373 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms