RNA–Protein interactions for RNA: ENST00000466308.1

CLSPN-204, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-204ENST00000466308 GADD45BO75293 160 aaPredicted RBP9.57□□□□□ -0.88
CLSPN-204ENST00000466308 SDE2Q6IQ49 451 aa9.57□□□□□ -0.88
CLSPN-204ENST00000466308 SUV39H2Q9H5I1 410 aa9.57□□□□□ -0.88
CLSPN-204ENST00000466308 TMEM63CQ9P1W3 806 aa9.57□□□□□ -0.88
CLSPN-204ENST00000466308 EPB42P16452 691 aa9.56□□□□□ -0.88
CLSPN-204ENST00000466308 GSTT1P30711 240 aa9.56□□□□□ -0.88
CLSPN-204ENST00000466308 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
CLSPN-204ENST00000466308 PMEPA1Q969W9 287 aa9.56□□□□□ -0.88
CLSPN-204ENST00000466308 SEC16BQ96JE7 1060 aa9.56□□□□□ -0.88
CLSPN-204ENST00000466308 TSEN34Q9BSV6 310 aaKnown RBP9.56□□□□□ -0.88
CLSPN-204ENST00000466308 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
CLSPN-204ENST00000466308 POLR3DP05423 398 aaPredicted RBP9.55□□□□□ -0.88
CLSPN-204ENST00000466308 ATP4AP20648 1035 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 PHKA2P46019 1235 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 WDR44Q5JSH3 913 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 ZNF662Q6ZS27 426 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 ZNF598Q86UK7 904 aaKnown RBP9.55□□□□□ -0.88
CLSPN-204ENST00000466308 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 INSM2Q96T92 566 aaPredicted RBP9.55□□□□□ -0.88
CLSPN-204ENST00000466308 RSRP1Q9BUV0 290 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 CHRDQ9H2X0 955 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 C11orf16Q9NQ32 467 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 KBTBD4Q9NVX7 518 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 PKD2L1Q9P0L9 805 aa9.55□□□□□ -0.88
CLSPN-204ENST00000466308 SPINT1O43278 529 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 FOXC1Q12948 553 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 PWP1Q13610 501 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 GRM2Q14416 872 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 ZNF746Q6NUN9 644 aaPredicted RBP9.54□□□□□ -0.88
CLSPN-204ENST00000466308 CKAP2LQ8IYA6 745 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 SPON2Q9BUD6 331 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
CLSPN-204ENST00000466308 ABI2Q9NYB9 513 aaPredicted RBP9.54□□□□□ -0.88
CLSPN-204ENST00000466308 EREGO14944 169 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 XYLBO75191 536 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 EGFRP00533 1210 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 EGFLAMQ63HQ2 1017 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 LRRC69Q6ZNQ3 347 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
CLSPN-204ENST00000466308 TRAK1Q9UPV9 953 aa9.53□□□□□ -0.88
CLSPN-204ENST00000466308 BMS1Q14692 1282 aaKnown RBP9.52□□□□□ -0.89
CLSPN-204ENST00000466308 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
CLSPN-204ENST00000466308 KIAA0319Q5VV43 1072 aa9.52□□□□□ -0.89
CLSPN-204ENST00000466308 KIAA0825Q8IV33 1275 aa9.52□□□□□ -0.89
CLSPN-204ENST00000466308 C1orf127Q8N9H9 656 aa9.52□□□□□ -0.89
CLSPN-204ENST00000466308 CNTN3Q9P232 1028 aa9.52□□□□□ -0.89
CLSPN-204ENST00000466308 TTF2Q9UNY4 1162 aaKnown RBP9.52□□□□□ -0.89
CLSPN-204ENST00000466308 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
CLSPN-204ENST00000466308 J3QL48 77 aa9.51□□□□□ -0.89
CLSPN-204ENST00000466308 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
CLSPN-204ENST00000466308 VEGFBP49765 207 aa9.51□□□□□ -0.89
CLSPN-204ENST00000466308 TYRO3Q06418 890 aa9.51□□□□□ -0.89
CLSPN-204ENST00000466308 NLRP13Q86W25 1043 aa9.51□□□□□ -0.89
CLSPN-204ENST00000466308 NLGN1Q8N2Q7 840 aa9.51□□□□□ -0.89
CLSPN-204ENST00000466308 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
CLSPN-204ENST00000466308 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
CLSPN-204ENST00000466308 SSBP05455 408 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLSPN-204ENST00000466308 CES1P23141 567 aa9.5□□□□□ -0.89
CLSPN-204ENST00000466308 POU4F2Q12837 409 aa9.5□□□□□ -0.89
CLSPN-204ENST00000466308 RELL1Q8IUW5 271 aa9.5□□□□□ -0.89
CLSPN-204ENST00000466308 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
CLSPN-204ENST00000466308 PPM1HQ9ULR3 514 aa9.5□□□□□ -0.89
CLSPN-204ENST00000466308 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLSPN-204ENST00000466308 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
CLSPN-204ENST00000466308 CTSOP43234 321 aaPredicted RBP9.49□□□□□ -0.89
CLSPN-204ENST00000466308 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
CLSPN-204ENST00000466308 TTC39BQ5VTQ0 682 aaPredicted RBP9.49□□□□□ -0.89
CLSPN-204ENST00000466308 GLIS3Q8NEA6 775 aa9.49□□□□□ -0.89
CLSPN-204ENST00000466308 MRFAP1L1Q96HT8 127 aa9.49□□□□□ -0.89
CLSPN-204ENST00000466308 ADAMTS1Q9UHI8 967 aa9.49□□□□□ -0.89
CLSPN-204ENST00000466308 UPP2O95045 317 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 RLBP1P12271 317 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 XRCC5P13010 732 aaKnown RBP9.48□□□□□ -0.89
CLSPN-204ENST00000466308 EDN3P14138 238 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 MSX1P28360 303 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 SERINC3Q13530 473 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 CCDC85BQ15834 202 aaPredicted RBP9.48□□□□□ -0.89
CLSPN-204ENST00000466308 PRPF40BQ6NWY9 871 aaKnown RBP9.48□□□□□ -0.89
CLSPN-204ENST00000466308 JAZF1Q86VZ6 243 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 CYP4X1Q8N118 509 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 LINC00528Q8N1L1 170 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 MKL1Q969V6 931 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
CLSPN-204ENST00000466308 CEP63Q96MT8 703 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 TMEM74Q96NL1 305 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 EHD4Q9H223 541 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 STRIP2Q9ULQ0 834 aa9.48□□□□□ -0.89
CLSPN-204ENST00000466308 A0A1W2PNR3 127 aa9.47□□□□□ -0.89
CLSPN-204ENST00000466308 A0A1W2PP55 124 aa9.47□□□□□ -0.89
CLSPN-204ENST00000466308 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
CLSPN-204ENST00000466308 EIF4A3P38919 411 aaKnown RBP9.47□□□□□ -0.89
CLSPN-204ENST00000466308 PRICKLE2Q7Z3G6 844 aa9.47□□□□□ -0.89
CLSPN-204ENST00000466308 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
CLSPN-204ENST00000466308 GJA3Q9Y6H8 435 aa9.47□□□□□ -0.89
CLSPN-204ENST00000466308 SMPD1P17405 629 aa9.46□□□□□ -0.9
CLSPN-204ENST00000466308 GBP2P32456 591 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms