RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 SH3TC2Q8TF17 1288 aa14.38□□□□□ -0.11
CSF3R-208ENST00000466138 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
CSF3R-208ENST00000466138 PTCH2Q9Y6C5 1203 aa14.38□□□□□ -0.11
CSF3R-208ENST00000466138 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 MTHFSP49914 203 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 SREBF2Q12772 1141 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 SHISA4Q96DD7 197 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 ZNRF3Q9ULT6 936 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 SNED1Q8TER0 1413 aa14.37□□□□□ -0.11
CSF3R-208ENST00000466138 EYSQ5T1H1 3165 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 A0A087WZG4 1122 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 SLC39A6Q13433 755 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 ZNF530Q6P9A1 599 aaPredicted RBP14.36□□□□□ -0.11
CSF3R-208ENST00000466138 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 SULF1Q8IWU6 871 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 TESK2Q96S53 571 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 ASTN2O75129 1339 aaPredicted RBP14.36□□□□□ -0.11
CSF3R-208ENST00000466138 SYNGAP1Q96PV0 1343 aa14.36□□□□□ -0.11
CSF3R-208ENST00000466138 ZNF609O15014 1411 aa14.35□□□□□ -0.11
CSF3R-208ENST00000466138 EVI5O60447 810 aa14.35□□□□□ -0.11
CSF3R-208ENST00000466138 TTLL12Q14166 644 aaPredicted RBP14.35□□□□□ -0.11
CSF3R-208ENST00000466138 SCAF8Q9UPN6 1271 aaKnown RBP14.35□□□□□ -0.11
CSF3R-208ENST00000466138 EIF5P55010 431 aaKnown RBP14.34□□□□□ -0.11
CSF3R-208ENST00000466138 MAFAQ8NHW3 353 aaPredicted RBP14.34□□□□□ -0.11
CSF3R-208ENST00000466138 CFHR5Q9BXR6 569 aa14.34□□□□□ -0.11
CSF3R-208ENST00000466138 GGA3Q9NZ52 723 aa14.34□□□□□ -0.11
CSF3R-208ENST00000466138 POLR2AP24928 1970 aaKnown RBP14.34□□□□□ -0.11
CSF3R-208ENST00000466138 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
CSF3R-208ENST00000466138 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
CSF3R-208ENST00000466138 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
CSF3R-208ENST00000466138 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
CSF3R-208ENST00000466138 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
CSF3R-208ENST00000466138 TNIP1Q15025 636 aa14.32□□□□□ -0.12
CSF3R-208ENST00000466138 CDHR2Q9BYE9 1310 aa14.32□□□□□ -0.12
CSF3R-208ENST00000466138 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
CSF3R-208ENST00000466138 LRIT3Q3SXY7 679 aa14.31□□□□□ -0.12
CSF3R-208ENST00000466138 KLRG2A4D1S0 409 aaPredicted RBP14.3□□□□□ -0.12
CSF3R-208ENST00000466138 MTFR1Q15390 333 aa14.3□□□□□ -0.12
CSF3R-208ENST00000466138 PRAMEF18Q5VWM3 479 aa14.3□□□□□ -0.12
CSF3R-208ENST00000466138 CC2D2BQ6DHV5 1058 aa14.3□□□□□ -0.12
CSF3R-208ENST00000466138 SCN7AQ01118 1682 aa14.3□□□□□ -0.12
CSF3R-208ENST00000466138 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
CSF3R-208ENST00000466138 ALDH1A1P00352 501 aa14.29□□□□□ -0.12
CSF3R-208ENST00000466138 ZMYND8Q9ULU4 1186 aaPredicted RBP14.29□□□□□ -0.12
CSF3R-208ENST00000466138 CAMTA2O94983 1202 aa14.28□□□□□ -0.12
CSF3R-208ENST00000466138 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
CSF3R-208ENST00000466138 SP3Q02447 781 aa14.28□□□□□ -0.12
CSF3R-208ENST00000466138 PLEKHO1Q53GL0 409 aaPredicted RBP14.28□□□□□ -0.12
CSF3R-208ENST00000466138 C1orf141Q5JVX7 400 aa14.28□□□□□ -0.12
CSF3R-208ENST00000466138 GDF15Q99988 308 aa14.28□□□□□ -0.12
CSF3R-208ENST00000466138 HCN4Q9Y3Q4 1203 aa14.28□□□□□ -0.12
CSF3R-208ENST00000466138 FYB1O15117 783 aa14.27□□□□□ -0.13
CSF3R-208ENST00000466138 GTF2E1P29083 439 aaPredicted RBP14.27□□□□□ -0.13
CSF3R-208ENST00000466138 FKBP1BP68106 108 aa14.27□□□□□ -0.13
CSF3R-208ENST00000466138 PRKG1Q13976 671 aa14.27□□□□□ -0.13
CSF3R-208ENST00000466138 TJAP1Q5JTD0 557 aa14.27□□□□□ -0.13
CSF3R-208ENST00000466138 IFNL1Q8IU54 200 aa14.27□□□□□ -0.13
CSF3R-208ENST00000466138 CRHR2Q13324 411 aa14.26□□□□□ -0.13
CSF3R-208ENST00000466138 KIF4BQ2VIQ3 1234 aa14.26□□□□□ -0.13
CSF3R-208ENST00000466138 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
CSF3R-208ENST00000466138 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
CSF3R-208ENST00000466138 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
CSF3R-208ENST00000466138 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
CSF3R-208ENST00000466138 TTC28Q96AY4 2481 aa14.26□□□□□ -0.13
CSF3R-208ENST00000466138 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
CSF3R-208ENST00000466138 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
CSF3R-208ENST00000466138 SYN1P17600 705 aa14.25□□□□□ -0.13
CSF3R-208ENST00000466138 BMP8BP34820 402 aa14.25□□□□□ -0.13
CSF3R-208ENST00000466138 TCIRG1Q13488 830 aa14.25□□□□□ -0.13
CSF3R-208ENST00000466138 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
CSF3R-208ENST00000466138 RPGRQ92834 1020 aaKnown RBP14.25□□□□□ -0.13
CSF3R-208ENST00000466138 CDX2Q99626 313 aaPredicted RBP14.25□□□□□ -0.13
CSF3R-208ENST00000466138 PRUNE2Q8WUY3 3088 aa14.24□□□□□ -0.13
CSF3R-208ENST00000466138 FARP2O94887 1054 aaPredicted RBP14.24□□□□□ -0.13
CSF3R-208ENST00000466138 UBE2Q1Q7Z7E8 422 aa14.24□□□□□ -0.13
CSF3R-208ENST00000466138 PSMD14O00487 310 aa14.23□□□□□ -0.13
CSF3R-208ENST00000466138 STARD3NLO95772 234 aa14.23□□□□□ -0.13
CSF3R-208ENST00000466138 DZIP3Q86Y13 1208 aaKnown RBP14.23□□□□□ -0.13
CSF3R-208ENST00000466138 C7orf61Q8IZ16 206 aa14.23□□□□□ -0.13
CSF3R-208ENST00000466138 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
CSF3R-208ENST00000466138 PIP4K2AP48426 406 aaPredicted RBP14.22□□□□□ -0.13
CSF3R-208ENST00000466138 PTPN12Q05209 780 aaKnown RBP14.22□□□□□ -0.13
CSF3R-208ENST00000466138 MYLIPQ8WY64 445 aa14.22□□□□□ -0.13
CSF3R-208ENST00000466138 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
CSF3R-208ENST00000466138 UBE2OQ9C0C9 1292 aaKnown RBP14.22□□□□□ -0.13
CSF3R-208ENST00000466138 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
CSF3R-208ENST00000466138 SPRYD7Q5W111 196 aa14.21□□□□□ -0.13
CSF3R-208ENST00000466138 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
CSF3R-208ENST00000466138 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
CSF3R-208ENST00000466138 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
CSF3R-208ENST00000466138 KIF24Q5T7B8 1368 aa14.21□□□□□ -0.14
CSF3R-208ENST00000466138 A1BGP04217 495 aa14.2□□□□□ -0.14
CSF3R-208ENST00000466138 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
CSF3R-208ENST00000466138 GRIPAP1Q4V328 841 aa14.2□□□□□ -0.14
CSF3R-208ENST00000466138 ZNF697Q5TEC3 545 aa14.2□□□□□ -0.14
CSF3R-208ENST00000466138 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
CSF3R-208ENST00000466138 DPF2Q92785 391 aa14.2□□□□□ -0.14
CSF3R-208ENST00000466138 LAMA2P24043 3122 aaKnown RBP14.19□□□□□ -0.14
CSF3R-208ENST00000466138 GJA8P48165 433 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms