RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 TRIM74Q86UV6 250 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 TRIM73Q86UV7 250 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 BAG1Q99933 345 aaPredicted RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 ZCCHC17Q9NP64 241 aaKnown RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 ORC3Q9UBD5 711 aaPredicted RBP11.05□□□□□ -0.64
CDHR3-203ENST00000466045 MYO5BQ9ULV0 1848 aa11.05□□□□□ -0.64
CDHR3-203ENST00000466045 CCP110O43303 1012 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 ERLIN2O94905 339 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 SETSIPP0DME0 302 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 CASTP20810 708 aaKnown RBP11.04□□□□□ -0.64
CDHR3-203ENST00000466045 ABCD1P33897 745 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 SPC24Q8NBT2 197 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 NSD2O96028 1365 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 SASH3O75995 380 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 SNUPNO95149 360 aaKnown RBP11.04□□□□□ -0.64
CDHR3-203ENST00000466045 PREPLQ4J6C6 727 aaPredicted RBP11.04□□□□□ -0.64
CDHR3-203ENST00000466045 ARHGAP29Q52LW3 1261 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 CPLX2Q6PUV4 134 aaKnown RBP11.04□□□□□ -0.64
CDHR3-203ENST00000466045 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
CDHR3-203ENST00000466045 MMTAG2Q9BU76 263 aaKnown RBP11.04□□□□□ -0.64
CDHR3-203ENST00000466045 USP26Q9BXU7 913 aa11.04□□□□□ -0.64
CDHR3-203ENST00000466045 EVC2Q86UK5 1308 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 RLBP1P12271 317 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 PRPHP41219 470 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 LRMPQ12912 555 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 TMEM132EQ6IEE7 984 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 MICALL1Q8N3F8 863 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 IL16Q14005 1332 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 ZNF335Q9H4Z2 1342 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-203ENST00000466045 PPFIA4O75335 1185 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 CCNHP51946 323 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-203ENST00000466045 SCRN1Q12765 414 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 PDIA5Q14554 519 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
CDHR3-203ENST00000466045 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
CDHR3-203ENST00000466045 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 FOXR1Q6PIV2 292 aa11.03□□□□□ -0.64
CDHR3-203ENST00000466045 CDC25BP30305 580 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 ZGPATQ8N5A5 531 aaKnown RBP11.02□□□□□ -0.65
CDHR3-203ENST00000466045 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 THOC1Q96FV9 657 aaKnown RBP11.02□□□□□ -0.65
CDHR3-203ENST00000466045 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 RARSP54136 660 aaKnown RBP11.02□□□□□ -0.65
CDHR3-203ENST00000466045 NUCB1Q02818 461 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 WLSQ5T9L3 541 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 CWC27Q6UX04 472 aaKnown RBP11.02□□□□□ -0.65
CDHR3-203ENST00000466045 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 PLA2G4DQ86XP0 818 aa11.02□□□□□ -0.65
CDHR3-203ENST00000466045 THUMPD2Q9BTF0 503 aaKnown RBP11.02□□□□□ -0.65
CDHR3-203ENST00000466045 CHCHD3Q9NX63 227 aaKnown RBP11.02□□□□□ -0.65
CDHR3-203ENST00000466045 CC2D1AQ6P1N0 951 aaPredicted RBP11.01□□□□□ -0.65
CDHR3-203ENST00000466045 TBC1D9Q6ZT07 1266 aa11.01□□□□□ -0.65
CDHR3-203ENST00000466045 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
CDHR3-203ENST00000466045 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
CDHR3-203ENST00000466045 N4BP2L2Q92802 583 aaPredicted RBP11.01□□□□□ -0.65
CDHR3-203ENST00000466045 RUNDC1Q96C34 613 aa11.01□□□□□ -0.65
CDHR3-203ENST00000466045 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
CDHR3-203ENST00000466045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDHR3-203ENST00000466045 TCHHQ07283 1943 aa11.01□□□□□ -0.65
CDHR3-203ENST00000466045 IMPDH2P12268 514 aa11.01□□□□□ -0.65
CDHR3-203ENST00000466045 PECAM1P16284 738 aaPredicted RBP11.01□□□□□ -0.65
CDHR3-203ENST00000466045 NF2P35240 595 aa11.01□□□□□ -0.65
CDHR3-203ENST00000466045 ADAMTS13Q76LX8 1427 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 CHUKO15111 745 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 SF3A1Q15459 793 aaKnown RBP11□□□□□ -0.65
CDHR3-203ENST00000466045 NCAPG2Q86XI2 1143 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 POTEDQ86YR6 584 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 ANKRD18AQ8IVF6 992 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 CACTINQ8WUQ7 758 aaKnown RBP11□□□□□ -0.65
CDHR3-203ENST00000466045 PIK3R5Q8WYR1 880 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 CCDC97Q96F63 343 aaPredicted RBP11□□□□□ -0.65
CDHR3-203ENST00000466045 CFAP53Q96M91 514 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 SLX1AQ9BQ83 275 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 FUT8Q9BYC5 575 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 ZNF232Q9UNY5 417 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 ANKRD26Q9UPS8 1709 aa11□□□□□ -0.65
CDHR3-203ENST00000466045 MAP2K7O14733 419 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 ST18O60284 1047 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 SKILP12757 684 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 KCNA6P17658 529 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 PSMD2Q13200 908 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 ZRSR2Q15696 482 aaKnown RBP10.99□□□□□ -0.65
CDHR3-203ENST00000466045 RBM12BQ8IXT5 1001 aaKnown RBP10.99□□□□□ -0.65
CDHR3-203ENST00000466045 RPUSD2Q8IZ73 545 aaKnown RBP10.99□□□□□ -0.65
CDHR3-203ENST00000466045 FAM200AQ8TCP9 573 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 JPH2Q9BR39 696 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-203ENST00000466045 A0A1B0GUA9 196 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-203ENST00000466045 KCNA4P22459 653 aa10.99□□□□□ -0.65
CDHR3-203ENST00000466045 ISM2Q6H9L7 571 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms