RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 DCDC2BA2VCK2 349 aa8.53□□□□□ -1.04
CACNA1C-223ENST00000465278 BNIP3LO60238 219 aa8.53□□□□□ -1.04
CACNA1C-223ENST00000465278 IER5Q5VY09 327 aa8.53□□□□□ -1.04
CACNA1C-223ENST00000465278 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
CACNA1C-223ENST00000465278 NXF1Q9UBU9 619 aaKnown RBP8.53□□□□□ -1.04
CACNA1C-223ENST00000465278 PRG4Q92954 1404 aaPredicted RBP8.53□□□□□ -1.04
CACNA1C-223ENST00000465278 ARSDP51689 593 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 TNP2Q05952 138 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 TYRO3Q06418 890 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 GRIN2CQ14957 1233 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 FIGNL1Q6PIW4 674 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 SV2AQ7L0J3 742 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 NUDT16Q96DE0 195 aaKnown RBP8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 GGNBP2Q9H3C7 697 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 BRD7Q9NPI1 651 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 RTCBQ9Y3I0 505 aaKnown RBP8.52□□□□□ -1.05
CACNA1C-223ENST00000465278 A6NHS1 94 aa8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 MAPTP10636 758 aaKnown RBP8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 MZF1P28698 734 aaPredicted RBP8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 HSPA1LP34931 641 aa8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 LBRQ14739 615 aaKnown RBP8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 C8orf34Q49A92 452 aa8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 RGS17Q9UGC6 210 aaPredicted RBP8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 DCTN4Q9UJW0 460 aa8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 CCDC9Q9Y3X0 531 aaKnown RBP8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 PLB1Q6P1J6 1458 aa8.51□□□□□ -1.05
CACNA1C-223ENST00000465278 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
CACNA1C-223ENST00000465278 NDUFB5O43674 189 aa8.5□□□□□ -1.05
CACNA1C-223ENST00000465278 SOGA1O94964 1423 aa8.5□□□□□ -1.05
CACNA1C-223ENST00000465278 PDGFAP04085 211 aa8.5□□□□□ -1.05
CACNA1C-223ENST00000465278 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
CACNA1C-223ENST00000465278 SAMD5Q5TGI4 173 aa8.5□□□□□ -1.05
CACNA1C-223ENST00000465278 ADAMTS12P58397 1594 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 CD33P20138 364 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 FOXR1Q6PIV2 292 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 GPR161Q8N6U8 529 aaKnown RBP8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 TTC16Q8NEE8 873 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 GMCL1Q96IK5 515 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 FAM13BQ9NYF5 915 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 KCNMB2Q9Y691 235 aa8.49□□□□□ -1.05
CACNA1C-223ENST00000465278 ASXL2Q76L83 1435 aa8.48□□□□□ -1.05
CACNA1C-223ENST00000465278 ABCA5Q8WWZ7 1642 aa8.48□□□□□ -1.05
CACNA1C-223ENST00000465278 PCSK2P16519 638 aa8.48□□□□□ -1.05
CACNA1C-223ENST00000465278 CTBSQ01459 385 aa8.48□□□□□ -1.05
CACNA1C-223ENST00000465278 NDFIP2Q9NV92 336 aa8.48□□□□□ -1.05
CACNA1C-223ENST00000465278 FER1L4A9Z1Z3 1794 aa8.48□□□□□ -1.05
CACNA1C-223ENST00000465278 ANKRD33BA6NCL7 494 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 EFSO43281 561 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 KRT25Q7Z3Z0 450 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 TMC7Q7Z402 723 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 MARK1Q9P0L2 795 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 TTC37Q6PGP7 1564 aa8.47□□□□□ -1.05
CACNA1C-223ENST00000465278 EPRSP07814 1512 aaKnown RBP8.46□□□□□ -1.05
CACNA1C-223ENST00000465278 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 XYLBO75191 536 aa8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 SASH3O75995 380 aa8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 EPB42P16452 691 aa8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 TRIP4Q15650 581 aaPredicted RBP8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 DNAJC14Q6Y2X3 702 aaPredicted RBP8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 ZSCAN29Q8IWY8 852 aaPredicted RBP8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 TRERF1Q96PN7 1200 aa8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 NIF3L1Q9GZT8 377 aa8.46□□□□□ -1.06
CACNA1C-223ENST00000465278 H3BM21 787 aa8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 TARSP26639 723 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 RAB44Q7Z6P3 723 aaPredicted RBP8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 FOXD4L4Q8WXT5 416 aaPredicted RBP8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 ATXN7L1Q9ULK2 861 aaPredicted RBP8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 PHF24Q9UPV7 400 aa8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 FNDC3AQ9Y2H6 1198 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-223ENST00000465278 FGFR3P22607 806 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 USP5P45974 858 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 KCNQ4P56696 695 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 PLCB3Q01970 1234 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 RGS22Q8NE09 1264 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 ASB16Q96NS5 453 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
CACNA1C-223ENST00000465278 C2CD2LO14523 706 aa8.43□□□□□ -1.06
CACNA1C-223ENST00000465278 SPEM2Q0P670 501 aa8.43□□□□□ -1.06
CACNA1C-223ENST00000465278 CCINQ13939 588 aa8.43□□□□□ -1.06
CACNA1C-223ENST00000465278 GJD3Q8N144 294 aa8.43□□□□□ -1.06
CACNA1C-223ENST00000465278 ABCC2Q92887 1545 aa8.43□□□□□ -1.06
CACNA1C-223ENST00000465278 RPLP1P05386 114 aaKnown RBP8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 PDE3BQ13370 1112 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 LAMC2Q13753 1193 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 SLC16A10Q8TF71 515 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 BHMTQ93088 406 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 ELP3Q9H9T3 547 aa8.42□□□□□ -1.06
CACNA1C-223ENST00000465278 ERBB4Q15303 1308 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms