RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 AIMP1Q12904 312 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 CCDC129Q6ZRS4 1044 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 KAZALD1Q96I82 304 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 SUCLG2Q96I99 432 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 PXDNLA1KZ92 1463 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 GOLGA6L19H0YKK7 550 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 SLFN14P0C7P3 912 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 NPHP4O75161 1426 aaPredicted RBP14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 RESTQ13127 1097 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 SEC62Q99442 399 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 GOLPH3LQ9H4A5 285 aa14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-204ENST00000464764 H3BQV1 296 aa14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 IFFO2Q5TF58 517 aa14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 CCDC9Q9Y3X0 531 aaKnown RBP14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 ELF2Q15723 593 aa14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 ABTB2Q8N961 1025 aa14.83□□□□□ -0.04
CLCNKA-204ENST00000464764 CCDC69A6NI79 296 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 G3BP1Q13283 466 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 MTX1Q13505 466 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 PTPN14Q15678 1187 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 NBPF6Q5VWK0 638 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 CYB5RLQ6IPT4 315 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 Q6ZUG5 572 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 NBPF4Q96M43 638 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 AMOTL2Q9Y2J4 779 aa14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 CCAR1Q8IX12 1150 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-204ENST00000464764 TAF5LO75529 589 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 GUCY1B3Q02153 619 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 SLFNL1Q499Z3 407 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 RNF20Q5VTR2 975 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 FBXO38Q6PIJ6 1188 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 MORC2Q9Y6X9 1032 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 COL15A1P39059 1388 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 ADAMTS13Q76LX8 1427 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 ANKRD1Q15327 319 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 LRRN4CLQ8ND94 238 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 GTF3C6Q969F1 213 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 BECN2A8MW95 431 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 SYCP1Q15431 976 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 KLHL34Q8N239 644 aa14.81□□□□□ -0.04
CLCNKA-204ENST00000464764 ADD1P35611 737 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 CCZ1BP86790 482 aa14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 CCZ1P86791 482 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 TEFQ10587 303 aa14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 NYAP1Q6ZVC0 841 aa14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 SCRN1Q12765 414 aa14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 DHX40Q8IX18 779 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 PTPRUQ92729 1446 aa14.8□□□□□ -0.04
CLCNKA-204ENST00000464764 TMEM2Q9UHN6 1383 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 RBM6P78332 1123 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 ERC1Q8IUD2 1116 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 NEK1Q96PY6 1258 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 NALCNQ8IZF0 1738 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 CCT2P78371 535 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 USP28Q96RU2 1077 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 ERBB3P21860 1342 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 ERICH4A6NGS2 130 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 SNW1Q13573 536 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 TERF2Q15554 542 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 AOPEPQ8N6M6 819 aa14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 NAP1L2Q9ULW6 460 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-204ENST00000464764 A0A0G2JLW4 131 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 FGD1P98174 961 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 KSR2Q6VAB6 950 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 CCAR2Q8N163 923 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 NCOA5Q9HCD5 579 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 NWD1Q149M9 1564 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 GRM8O00222 908 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 EPHA10Q5JZY3 1008 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 MRFAP1L1Q96HT8 127 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 ZNF446Q9NWS9 450 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 CEMIPQ8WUJ3 1361 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 MED23Q9ULK4 1368 aa14.78□□□□□ -0.04
CLCNKA-204ENST00000464764 HIP1O00291 1037 aa14.77□□□□□ -0.04
CLCNKA-204ENST00000464764 CYP21A2P08686 494 aa14.77□□□□□ -0.04
CLCNKA-204ENST00000464764 CDC25BP30305 580 aa14.77□□□□□ -0.04
CLCNKA-204ENST00000464764 ZNF397Q8NF99 534 aaPredicted RBP14.77□□□□□ -0.04
CLCNKA-204ENST00000464764 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.04
CLCNKA-204ENST00000464764 LRRC37A3O60309 1634 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 STX1AQ16623 288 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 ERCC6LQ2NKX8 1250 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 ZNF530Q6P9A1 599 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 SARM1Q6SZW1 724 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 CHST3Q7LGC8 479 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 KRT222Q8N1A0 295 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 DNAJC2Q99543 621 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 CRYBG1Q9Y4K1 1723 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 CEBPAP49715 358 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 GABPB1Q06547 395 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 STOX1Q6ZVD7 989 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms