RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PALLDQ8WX93 1383 aa26.27■■□□□ 1.8
PDLIM2-216ENST00000464275 GPTP24298 496 aa26.26■■□□□ 1.79
PDLIM2-216ENST00000464275 ZNF594Q96JF6 807 aaPredicted RBP26.26■■□□□ 1.79
PDLIM2-216ENST00000464275 FSD1Q9BTV5 496 aa26.26■■□□□ 1.79
PDLIM2-216ENST00000464275 DDX11L8A8MPP1 907 aa26.26■■□□□ 1.79
PDLIM2-216ENST00000464275 TBC1D2BQ9UPU7 963 aa26.26■■□□□ 1.79
PDLIM2-216ENST00000464275 CRKLP46109 303 aaKnown RBP26.25■■□□□ 1.79
PDLIM2-216ENST00000464275 LRRC24Q50LG9 513 aa26.25■■□□□ 1.79
PDLIM2-216ENST00000464275 ZNF609O15014 1411 aa26.25■■□□□ 1.79
PDLIM2-216ENST00000464275 RFX7Q2KHR2 1363 aa26.24■■□□□ 1.79
PDLIM2-216ENST00000464275 SNRKQ9NRH2 765 aa26.24■■□□□ 1.79
PDLIM2-216ENST00000464275 FOXD4L1Q9NU39 408 aa26.24■■□□□ 1.79
PDLIM2-216ENST00000464275 SPEF2Q9C093 1822 aa26.24■■□□□ 1.79
PDLIM2-216ENST00000464275 PTMSP20962 102 aa26.24■■□□□ 1.79
PDLIM2-216ENST00000464275 ZNF34Q8IZ26 560 aa26.24■■□□□ 1.79
PDLIM2-216ENST00000464275 NMIQ13287 307 aaPredicted RBP26.23■■□□□ 1.79
PDLIM2-216ENST00000464275 HAUS7Q99871 368 aa26.23■■□□□ 1.79
PDLIM2-216ENST00000464275 BCORQ6W2J9 1755 aa26.23■■□□□ 1.79
PDLIM2-216ENST00000464275 THSD7AQ9UPZ6 1657 aa26.23■■□□□ 1.79
PDLIM2-216ENST00000464275 IFIT5Q13325 482 aaKnown RBP26.22■■□□□ 1.79
PDLIM2-216ENST00000464275 ITPK1Q13572 414 aa26.22■■□□□ 1.79
PDLIM2-216ENST00000464275 NEUROD6Q96NK8 337 aa26.22■■□□□ 1.79
PDLIM2-216ENST00000464275 CEP126Q9P2H0 1117 aa26.22■■□□□ 1.79
PDLIM2-216ENST00000464275 RAB3GAP1Q15042 981 aa26.21■■□□□ 1.79
PDLIM2-216ENST00000464275 PUS3Q9BZE2 481 aaKnown RBP26.21■■□□□ 1.79
PDLIM2-216ENST00000464275 TRMT112Q9UI30 125 aaKnown RBP26.21■■□□□ 1.79
PDLIM2-216ENST00000464275 SNX14Q9Y5W7 946 aa26.21■■□□□ 1.79
PDLIM2-216ENST00000464275 KCNQ2O43526 872 aa26.2■■□□□ 1.79
PDLIM2-216ENST00000464275 FAM227BQ96M60 508 aa26.2■■□□□ 1.79
PDLIM2-216ENST00000464275 BRPF3Q9ULD4 1205 aa26.2■■□□□ 1.79
PDLIM2-216ENST00000464275 IRS4O14654 1257 aaPredicted RBP26.2■■□□□ 1.78
PDLIM2-216ENST00000464275 TAF7LQ5H9L4 462 aa26.2■■□□□ 1.78
PDLIM2-216ENST00000464275 CWC22Q9HCG8 908 aaKnown RBP26.2■■□□□ 1.78
PDLIM2-216ENST00000464275 CCDC171Q6TFL3 1326 aa26.2■■□□□ 1.78
PDLIM2-216ENST00000464275 LAMB2P55268 1798 aa26.2■■□□□ 1.78
PDLIM2-216ENST00000464275 CTSWP56202 376 aa26.19■■□□□ 1.78
PDLIM2-216ENST00000464275 PTH1RQ03431 593 aa26.19■■□□□ 1.78
PDLIM2-216ENST00000464275 SYNE4Q8N205 404 aa26.19■■□□□ 1.78
PDLIM2-216ENST00000464275 TTLL11Q8NHH1 800 aa26.19■■□□□ 1.78
PDLIM2-216ENST00000464275 USP21Q9UK80 565 aa26.19■■□□□ 1.78
PDLIM2-216ENST00000464275 BTAF1O14981 1849 aa26.19■■□□□ 1.78
PDLIM2-216ENST00000464275 PDE8AO60658 829 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 TIMM10P62072 90 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 AKAP2Q9Y2D5 859 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 UBN2Q6ZU65 1347 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 KCNB2Q92953 911 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 MED23Q9ULK4 1368 aa26.18■■□□□ 1.78
PDLIM2-216ENST00000464275 DDX60Q8IY21 1712 aaKnown RBP26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 A0A0D9SFI3 127 aa26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 A0A1B0GUL7 405 aa26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 TICAM2Q86XR7 235 aa26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 EDC3Q96F86 508 aaKnown RBP26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 AK7Q96M32 723 aa26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 DNAJC2Q99543 621 aaKnown RBP26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 ISY1Q9ULR0 285 aaKnown RBP26.17■■□□□ 1.78
PDLIM2-216ENST00000464275 CCDC85AQ96PX6 553 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-216ENST00000464275 ANKRD18BA2A2Z9 1011 aa26.16■■□□□ 1.78
PDLIM2-216ENST00000464275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.16■■□□□ 1.78
PDLIM2-216ENST00000464275 TNPO1Q92973 898 aaKnown RBP26.16■■□□□ 1.78
PDLIM2-216ENST00000464275 TMX3Q96JJ7 454 aa26.16■■□□□ 1.78
PDLIM2-216ENST00000464275 CAMTA2O94983 1202 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 RASEFQ8IZ41 740 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 MAP4K1Q92918 833 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 GBP4Q96PP9 640 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 ITGA6P23229 1130 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 NECTIN1Q15223 517 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 CERKQ8TCT0 537 aa26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 UPF3BQ9BZI7 483 aaKnown RBP26.15■■□□□ 1.78
PDLIM2-216ENST00000464275 PARP10Q53GL7 1025 aa26.14■■□□□ 1.77
PDLIM2-216ENST00000464275 GREM2Q9H772 168 aa26.14■■□□□ 1.77
PDLIM2-216ENST00000464275 MYH7P12883 1935 aa26.14■■□□□ 1.77
PDLIM2-216ENST00000464275 NUCB2P80303 420 aa26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 CUL4AQ13619 759 aa26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 KBTBD3Q8NAB2 608 aa26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 RBM8AQ9Y5S9 174 aaKnown RBP26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 SBF2Q86WG5 1849 aa26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 TRAK2O60296 914 aa26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 PRPF40BQ6NWY9 871 aaKnown RBP26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 PAG1Q9NWQ8 432 aa26.13■■□□□ 1.77
PDLIM2-216ENST00000464275 RIC1Q4ADV7 1423 aa26.12■■□□□ 1.77
PDLIM2-216ENST00000464275 SUSD4Q5VX71 490 aa26.12■■□□□ 1.77
PDLIM2-216ENST00000464275 TM6SF1Q9BZW5 370 aa26.12■■□□□ 1.77
PDLIM2-216ENST00000464275 RIPOR2Q9Y4F9 1068 aa26.12■■□□□ 1.77
PDLIM2-216ENST00000464275 NDUFB9Q9Y6M9 179 aa26.12■■□□□ 1.77
PDLIM2-216ENST00000464275 SH3TC1Q8TE82 1336 aa26.12■■□□□ 1.77
PDLIM2-216ENST00000464275 IFIT1P09914 478 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 UTP14AQ9BVJ6 771 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 LRP5O75197 1615 aa26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 FSD2A1L4K1 749 aa26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 KCNJ4P48050 445 aa26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 LDHAL6AQ6ZMR3 332 aa26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 DDX46Q7L014 1031 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-216ENST00000464275 ZKSCAN1P17029 563 aaPredicted RBP26.1■■□□□ 1.77
PDLIM2-216ENST00000464275 CCDC158Q5M9N0 1113 aa26.1■■□□□ 1.77
PDLIM2-216ENST00000464275 TTC14Q96N46 770 aa26.1■■□□□ 1.77
PDLIM2-216ENST00000464275 CASZ1Q86V15 1759 aa26.1■■□□□ 1.77
PDLIM2-216ENST00000464275 ARAP2Q8WZ64 1704 aa26.1■■□□□ 1.77
PDLIM2-216ENST00000464275 GOLGA6L3A6NEY3 463 aa26.09■■□□□ 1.77
PDLIM2-216ENST00000464275 SKOR2Q2VWA4 1001 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms