RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PIK3CDO00329 1044 aa8.8□□□□□ -1
CD46-211ENST00000464082 PCF11O94913 1555 aaKnown RBP8.8□□□□□ -1
CD46-211ENST00000464082 RICTORQ6R327 1708 aa8.8□□□□□ -1
CD46-211ENST00000464082 BACH1O14867 736 aa8.79□□□□□ -1
CD46-211ENST00000464082 EPHA4P54764 986 aa8.79□□□□□ -1
CD46-211ENST00000464082 NEUROD1Q13562 356 aa8.79□□□□□ -1
CD46-211ENST00000464082 MCTP1Q6DN14 999 aa8.79□□□□□ -1
CD46-211ENST00000464082 SLC9A9Q8IVB4 645 aa8.79□□□□□ -1
CD46-211ENST00000464082 NUDT8Q8WV74 236 aa8.79□□□□□ -1
CD46-211ENST00000464082 BRD7Q9NPI1 651 aa8.79□□□□□ -1
CD46-211ENST00000464082 KIF14Q15058 1648 aa8.79□□□□□ -1
CD46-211ENST00000464082 ARAP3Q8WWN8 1544 aa8.79□□□□□ -1
CD46-211ENST00000464082 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
CD46-211ENST00000464082 RAC1P63000 192 aa8.78□□□□□ -1
CD46-211ENST00000464082 TBC1D8BQ0IIM8 1120 aa8.78□□□□□ -1
CD46-211ENST00000464082 TNS4Q8IZW8 715 aa8.78□□□□□ -1
CD46-211ENST00000464082 HSH2DQ96JZ2 352 aa8.78□□□□□ -1
CD46-211ENST00000464082 CEP63Q96MT8 703 aa8.78□□□□□ -1
CD46-211ENST00000464082 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
CD46-211ENST00000464082 USP21Q9UK80 565 aa8.78□□□□□ -1
CD46-211ENST00000464082 MYO5CQ9NQX4 1742 aa8.77□□□□□ -1
CD46-211ENST00000464082 RHPN1Q8TCX5 695 aa8.77□□□□□ -1.01
CD46-211ENST00000464082 BHMTQ93088 406 aa8.77□□□□□ -1.01
CD46-211ENST00000464082 IGFLR1Q9H665 355 aa8.77□□□□□ -1.01
CD46-211ENST00000464082 FMN1Q68DA7 1419 aa8.77□□□□□ -1.01
CD46-211ENST00000464082 CDC42BPBQ9Y5S2 1711 aa8.77□□□□□ -1.01
CD46-211ENST00000464082 SFI1A8K8P3 1242 aa8.76□□□□□ -1.01
CD46-211ENST00000464082 AFF1P51825 1210 aaKnown RBP8.76□□□□□ -1.01
CD46-211ENST00000464082 KCNQ4P56696 695 aa8.76□□□□□ -1.01
CD46-211ENST00000464082 DMRTC2Q8IXT2 367 aaPredicted RBP8.76□□□□□ -1.01
CD46-211ENST00000464082 RNF112Q9ULX5 631 aa8.76□□□□□ -1.01
CD46-211ENST00000464082 KCNH4Q9UQ05 1017 aa8.76□□□□□ -1.01
CD46-211ENST00000464082 GPC6Q9Y625 555 aaPredicted RBP8.76□□□□□ -1.01
CD46-211ENST00000464082 SIGLEC1Q9BZZ2 1709 aa8.76□□□□□ -1.01
CD46-211ENST00000464082 SERTM1A2A2V5 107 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 GTF2IP78347 998 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 SEMA3FQ13275 785 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 ILDR2Q71H61 639 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 FMR1NBQ8N0W7 255 aaPredicted RBP8.75□□□□□ -1.01
CD46-211ENST00000464082 ZNF280CQ8ND82 737 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 UBE2OQ9C0C9 1292 aaKnown RBP8.75□□□□□ -1.01
CD46-211ENST00000464082 GDPD2Q9HCC8 539 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 SLC6A14Q9UN76 642 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 NEO1Q92859 1461 aa8.75□□□□□ -1.01
CD46-211ENST00000464082 CDC42BPAQ5VT25 1732 aa8.74□□□□□ -1.01
CD46-211ENST00000464082 CFAP74Q9C0B2 1584 aa8.74□□□□□ -1.01
CD46-211ENST00000464082 PRM3Q9NNZ6 103 aa8.74□□□□□ -1.01
CD46-211ENST00000464082 ADGRL1O94910 1474 aa8.73□□□□□ -1.01
CD46-211ENST00000464082 PSME1Q06323 249 aa8.73□□□□□ -1.01
CD46-211ENST00000464082 TYRO3Q06418 890 aa8.73□□□□□ -1.01
CD46-211ENST00000464082 EML3Q32P44 896 aa8.73□□□□□ -1.01
CD46-211ENST00000464082 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
CD46-211ENST00000464082 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
CD46-211ENST00000464082 CASKIN1Q8WXD9 1431 aa8.72□□□□□ -1.01
CD46-211ENST00000464082 ABL2P42684 1182 aa8.72□□□□□ -1.01
CD46-211ENST00000464082 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
CD46-211ENST00000464082 PSAPL1Q6NUJ1 521 aa8.72□□□□□ -1.01
CD46-211ENST00000464082 WFDC12Q8WWY7 111 aa8.72□□□□□ -1.01
CD46-211ENST00000464082 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
CD46-211ENST00000464082 PREX2Q70Z35 1606 aa8.72□□□□□ -1.01
CD46-211ENST00000464082 SUSD3Q96L08 255 aa8.71□□□□□ -1.02
CD46-211ENST00000464082 ADAMTSL3P82987 1691 aa8.71□□□□□ -1.02
CD46-211ENST00000464082 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.02
CD46-211ENST00000464082 CLIP1P30622 1438 aa8.71□□□□□ -1.02
CD46-211ENST00000464082 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
CD46-211ENST00000464082 FANCAO15360 1455 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 FYCO1Q9BQS8 1478 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 ZMYM4Q5VZL5 1548 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 ARHGEF40Q8TER5 1519 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 PLEKHD1A6NEE1 506 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 NOS3P29474 1203 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 PHACTR1Q9C0D0 580 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 BCORL1Q5H9F3 1711 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
CD46-211ENST00000464082 SKIP12755 728 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 NCOA4Q13772 614 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 WASHC4Q2M389 1173 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 C1orf53Q5VUE5 145 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
CD46-211ENST00000464082 PLCH2O75038 1416 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 CCDC18Q5T9S5 1454 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 ITSN2Q9NZM3 1697 aa8.69□□□□□ -1.02
CD46-211ENST00000464082 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
CD46-211ENST00000464082 MEGF10Q96KG7 1140 aa8.68□□□□□ -1.02
CD46-211ENST00000464082 TSPAN10Q9H1Z9 355 aaPredicted RBP8.68□□□□□ -1.02
CD46-211ENST00000464082 PCMTD2Q9NV79 361 aa8.68□□□□□ -1.02
CD46-211ENST00000464082 RGS9O75916 674 aaPredicted RBP8.67□□□□□ -1.02
CD46-211ENST00000464082 BRPF1P55201 1214 aaPredicted RBP8.67□□□□□ -1.02
CD46-211ENST00000464082 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
CD46-211ENST00000464082 KDM5CP41229 1560 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 DENND4BO75064 1496 aaPredicted RBP8.66□□□□□ -1.02
CD46-211ENST00000464082 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 PAX4O43316 350 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 SSTR4P31391 388 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 SOX11P35716 441 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 HIRAP54198 1017 aaPredicted RBP8.66□□□□□ -1.02
CD46-211ENST00000464082 POTEAQ6S8J7 498 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 PRR23CQ6ZRP0 262 aa8.66□□□□□ -1.02
CD46-211ENST00000464082 FBXO11Q86XK2 927 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms