RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SUV39H2Q9H5I1 410 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 ABCA8O94911 1581 aa6.01□□□□□ -1.45
SCFD1-204ENST00000463622 KIAA0556O60303 1618 aa6□□□□□ -1.45
SCFD1-204ENST00000463622 HIRAP54198 1017 aaPredicted RBP6□□□□□ -1.45
SCFD1-204ENST00000463622 ZNF468Q5VIY5 522 aaPredicted RBP6□□□□□ -1.45
SCFD1-204ENST00000463622 SYT9Q86SS6 491 aa6□□□□□ -1.45
SCFD1-204ENST00000463622 BRD7Q9NPI1 651 aa6□□□□□ -1.45
SCFD1-204ENST00000463622 NEO1Q92859 1461 aa6□□□□□ -1.45
SCFD1-204ENST00000463622 KIF21BO75037 1637 aa6□□□□□ -1.45
SCFD1-204ENST00000463622 CFAP43Q8NDM7 1665 aa5.99□□□□□ -1.45
SCFD1-204ENST00000463622 GOLGA3Q08378 1498 aa5.99□□□□□ -1.45
SCFD1-204ENST00000463622 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
SCFD1-204ENST00000463622 COL8A1P27658 744 aa5.99□□□□□ -1.45
SCFD1-204ENST00000463622 LINC00114Q6XXX2 140 aa5.99□□□□□ -1.45
SCFD1-204ENST00000463622 CHSY3Q70JA7 882 aa5.99□□□□□ -1.45
SCFD1-204ENST00000463622 ITGB2P05107 769 aa5.98□□□□□ -1.45
SCFD1-204ENST00000463622 TYRO3Q06418 890 aa5.98□□□□□ -1.45
SCFD1-204ENST00000463622 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
SCFD1-204ENST00000463622 FAM9AQ8IZU1 332 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-204ENST00000463622 FAM200AQ8TCP9 573 aa5.98□□□□□ -1.45
SCFD1-204ENST00000463622 ZMYND15Q9H091 742 aa5.98□□□□□ -1.45
SCFD1-204ENST00000463622 KLK14Q9P0G3 267 aa5.98□□□□□ -1.45
SCFD1-204ENST00000463622 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-204ENST00000463622 ARID3CA6NKF2 412 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 SPEM2Q0P670 501 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 PLA2G4EQ3MJ16 856 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 ANKIB1Q9P2G1 1089 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 BCS1LQ9Y276 419 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 GPC6Q9Y625 555 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-204ENST00000463622 FHOD3Q2V2M9 1422 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 IGFBP4P22692 258 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 BTLAQ7Z6A9 289 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 STAG2Q8N3U4 1231 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 PRIMPOLQ96LW4 560 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 YEATS2Q9ULM3 1422 aa5.97□□□□□ -1.45
SCFD1-204ENST00000463622 NOVA2Q9UNW9 492 aaKnown RBP5.97□□□□□ -1.45
SCFD1-204ENST00000463622 KRBA1A5PL33 1030 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 DGKGP49619 791 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 AVENQ9NQS1 362 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-204ENST00000463622 KCNH4Q9UQ05 1017 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 GTF3C3Q9Y5Q9 886 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 BCORL1Q5H9F3 1711 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 POGZQ7Z3K3 1410 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 MADDQ8WXG6 1647 aa5.96□□□□□ -1.46
SCFD1-204ENST00000463622 WEE1P30291 646 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 BHMTQ93088 406 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 IGFLR1Q9H665 355 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 ZMIZ1Q9ULJ6 1067 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 DENND4BO75064 1496 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-204ENST00000463622 ELOA3CA0A087WX78 387 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-204ENST00000463622 ELOA3DA6NLF2 546 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-204ENST00000463622 PRMT3O60678 531 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 TBC1D8BQ0IIM8 1120 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 DGKZQ13574 1117 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 RTN1Q16799 776 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 ELOA3BQ3SY89 546 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 C8orf86Q6ZUL3 223 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 ELOA3Q8NG57 546 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 STK32AQ8WU08 396 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 ABCA9Q8IUA7 1624 aa5.95□□□□□ -1.46
SCFD1-204ENST00000463622 AKNAQ7Z591 1439 aa5.94□□□□□ -1.46
SCFD1-204ENST00000463622 PLEKHD1A6NEE1 506 aa5.94□□□□□ -1.46
SCFD1-204ENST00000463622 CEBPAP49715 358 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-204ENST00000463622 QTRT2Q9H974 415 aaKnown RBP5.94□□□□□ -1.46
SCFD1-204ENST00000463622 PRXQ9BXM0 1461 aa5.94□□□□□ -1.46
SCFD1-204ENST00000463622 FRMPD1Q5SYB0 1578 aa5.94□□□□□ -1.46
SCFD1-204ENST00000463622 GNB5O14775 395 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 SIN3BO75182 1162 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 ALAS2P22557 587 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 KCNQ4P56696 695 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 SRPK2P78362 688 aaKnown RBP5.93□□□□□ -1.46
SCFD1-204ENST00000463622 MLECQ14165 292 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 TRIM11Q96F44 468 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 MDFIQ99750 246 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 DMGDHQ9UI17 866 aaKnown RBP5.93□□□□□ -1.46
SCFD1-204ENST00000463622 USP20Q9Y2K6 914 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 MAGI2Q86UL8 1455 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 GRNP28799 593 aaKnown RBP5.93□□□□□ -1.46
SCFD1-204ENST00000463622 FKBP5Q13451 457 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-204ENST00000463622 LRFN2Q9ULH4 789 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 STARD13Q9Y3M8 1113 aa5.93□□□□□ -1.46
SCFD1-204ENST00000463622 TGFBR3LH3BV60 316 aa5.92□□□□□ -1.46
SCFD1-204ENST00000463622 ADH7P40394 386 aa5.92□□□□□ -1.46
SCFD1-204ENST00000463622 CAPN12Q6ZSI9 719 aa5.92□□□□□ -1.46
SCFD1-204ENST00000463622 SPOCK3Q9BQ16 436 aa5.92□□□□□ -1.46
SCFD1-204ENST00000463622 PLVAPQ9BX97 442 aa5.92□□□□□ -1.46
SCFD1-204ENST00000463622 PTPRTO14522 1441 aa5.92□□□□□ -1.46
SCFD1-204ENST00000463622 M0R082 166 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 MSTNO14793 375 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 FOXO3O43524 673 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 ALBP02768 609 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 IDH3AP50213 366 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 KRT25Q7Z3Z0 450 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 ZNF417Q8TAU3 575 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 ZNF587Q96SQ5 575 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-204ENST00000463622 GSX2Q9BZM3 304 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 FANCAO15360 1455 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 ARHGEF40Q8TER5 1519 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms