RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
PHACTR4-203ENST00000463428 CRY2Q49AN0 593 aa17.38■□□□□ 0.37
PHACTR4-203ENST00000463428 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
PHACTR4-203ENST00000463428 PNMA6EA0A0J9YXQ4 647 aa17.37■□□□□ 0.37
PHACTR4-203ENST00000463428 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
PHACTR4-203ENST00000463428 KIAA1551Q9HCM1 1747 aa17.37■□□□□ 0.37
PHACTR4-203ENST00000463428 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 TAF1P21675 1872 aa17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 COL11A2P13942 1736 aaPredicted RBP17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 PDE6BP35913 854 aa17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 GREM2Q9H772 168 aa17.36■□□□□ 0.37
PHACTR4-203ENST00000463428 SRGNP10124 158 aa17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 POLA2Q14181 598 aa17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 SSH3Q8TE77 659 aa17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 COL4A1P02462 1669 aa17.35■□□□□ 0.37
PHACTR4-203ENST00000463428 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
PHACTR4-203ENST00000463428 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
PHACTR4-203ENST00000463428 SRGAP3O43295 1099 aa17.33■□□□□ 0.36
PHACTR4-203ENST00000463428 ITGA6P23229 1130 aa17.33■□□□□ 0.36
PHACTR4-203ENST00000463428 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.36
PHACTR4-203ENST00000463428 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
PHACTR4-203ENST00000463428 KCNA3P22001 575 aa17.32■□□□□ 0.36
PHACTR4-203ENST00000463428 CHRNA5P30532 468 aa17.32■□□□□ 0.36
PHACTR4-203ENST00000463428 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
PHACTR4-203ENST00000463428 H0YIN7 160 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 NPR1P16066 1061 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 TGFB2P61812 414 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 PTPN12Q05209 780 aaKnown RBP17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 IFIT5Q13325 482 aaKnown RBP17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 CHMP3Q9Y3E7 222 aa17.31■□□□□ 0.36
PHACTR4-203ENST00000463428 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 HDAC1Q13547 482 aaPredicted RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 KLHDC4Q8TBB5 520 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 COPRSQ9NQ92 184 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 LRP5O75197 1615 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 A0A0G2JLW4 131 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 IGHDP01880 384 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 DPEP1P16444 411 aa17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 DDX46Q7L014 1031 aaKnown RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 RPGRQ92834 1020 aaKnown RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
PHACTR4-203ENST00000463428 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
PHACTR4-203ENST00000463428 GRAPQ13588 217 aa17.29■□□□□ 0.36
PHACTR4-203ENST00000463428 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
PHACTR4-203ENST00000463428 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
PHACTR4-203ENST00000463428 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 HMMRO75330 724 aa17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 PUS3Q9BZE2 481 aaKnown RBP17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
PHACTR4-203ENST00000463428 CACNA1SQ13698 1873 aa17.27■□□□□ 0.36
PHACTR4-203ENST00000463428 ALDH1B1P30837 517 aa17.27■□□□□ 0.35
PHACTR4-203ENST00000463428 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.35
PHACTR4-203ENST00000463428 DCTPP1Q9H773 170 aa17.27■□□□□ 0.35
PHACTR4-203ENST00000463428 PPP1R1BQ9UD71 204 aaPredicted RBP17.27■□□□□ 0.35
PHACTR4-203ENST00000463428 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 NLGN2Q8NFZ4 835 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 RIPOR2Q9Y4F9 1068 aa17.26■□□□□ 0.35
PHACTR4-203ENST00000463428 EYA2O00167 538 aa17.25■□□□□ 0.35
PHACTR4-203ENST00000463428 BBOX1O75936 387 aa17.25■□□□□ 0.35
PHACTR4-203ENST00000463428 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
PHACTR4-203ENST00000463428 CNKSR1Q969H4 720 aa17.25■□□□□ 0.35
PHACTR4-203ENST00000463428 SYT17Q9BSW7 474 aa17.25■□□□□ 0.35
PHACTR4-203ENST00000463428 BSDC1Q9NW68 430 aaPredicted RBP17.25■□□□□ 0.35
PHACTR4-203ENST00000463428 SURF6O75683 361 aaKnown RBP17.24■□□□□ 0.35
PHACTR4-203ENST00000463428 CIAO1O76071 339 aa17.24■□□□□ 0.35
PHACTR4-203ENST00000463428 IGHMBP2P38935 993 aaKnown RBP17.24■□□□□ 0.35
PHACTR4-203ENST00000463428 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
PHACTR4-203ENST00000463428 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
PHACTR4-203ENST00000463428 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
PHACTR4-203ENST00000463428 SMC5Q8IY18 1101 aa17.23■□□□□ 0.35
PHACTR4-203ENST00000463428 SIL1Q9H173 461 aa17.23■□□□□ 0.35
PHACTR4-203ENST00000463428 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
PHACTR4-203ENST00000463428 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
PHACTR4-203ENST00000463428 LRRC37AA6NMS7 1700 aa17.23■□□□□ 0.35
PHACTR4-203ENST00000463428 A0A1B0GUL6 1792 aa17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 SASH1O94885 1247 aa17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 PRPF40BQ6NWY9 871 aaKnown RBP17.22■□□□□ 0.35
PHACTR4-203ENST00000463428 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms