RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
COPS3-205ENST00000463097 SPATA31C2B4DYI2 1134 aa8.44□□□□□ -1.06
COPS3-205ENST00000463097 FOXC1Q12948 553 aa8.44□□□□□ -1.06
COPS3-205ENST00000463097 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
COPS3-205ENST00000463097 NOC4LQ9BVI4 516 aaKnown RBP8.44□□□□□ -1.06
COPS3-205ENST00000463097 CHRDQ9H2X0 955 aa8.44□□□□□ -1.06
COPS3-205ENST00000463097 POTECB2RU33 542 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 GRM2Q14416 872 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 ZNF746Q6NUN9 644 aaPredicted RBP8.43□□□□□ -1.06
COPS3-205ENST00000463097 MEIOBQ8N635 442 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 INSM2Q96T92 566 aaPredicted RBP8.43□□□□□ -1.06
COPS3-205ENST00000463097 RSRP1Q9BUV0 290 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 SUV39H2Q9H5I1 410 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 KBTBD4Q9NVX7 518 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 SBNO2Q9Y2G9 1366 aa8.43□□□□□ -1.06
COPS3-205ENST00000463097 EREGO14944 169 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 GSTT1P30711 240 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 EGFLAMQ63HQ2 1017 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 LRRC69Q6ZNQ3 347 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 PMEPA1Q969W9 287 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 SEC16BQ96JE7 1060 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 ZIC5Q96T25 663 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 SPON2Q9BUD6 331 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 POLMQ9NP87 494 aaPredicted RBP8.42□□□□□ -1.06
COPS3-205ENST00000463097 PPP4R2Q9NY27 417 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 CNTN3Q9P232 1028 aa8.42□□□□□ -1.06
COPS3-205ENST00000463097 J3QL48 77 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 SPINT1O43278 529 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 EPB42P16452 691 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 ATP4AP20648 1035 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 POU4F2Q12837 409 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 BMS1Q14692 1282 aaKnown RBP8.41□□□□□ -1.06
COPS3-205ENST00000463097 ZNF598Q86UK7 904 aaKnown RBP8.41□□□□□ -1.06
COPS3-205ENST00000463097 CDAN1Q8IWY9 1227 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 CKAP2LQ8IYA6 745 aa8.41□□□□□ -1.06
COPS3-205ENST00000463097 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
COPS3-205ENST00000463097 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.41□□□□□ -1.06
COPS3-205ENST00000463097 TTF2Q9UNY4 1162 aaKnown RBP8.41□□□□□ -1.06
COPS3-205ENST00000463097 XYLBO75191 536 aa8.4□□□□□ -1.06
COPS3-205ENST00000463097 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.06
COPS3-205ENST00000463097 NFE2L2Q16236 605 aa8.4□□□□□ -1.06
COPS3-205ENST00000463097 ARSJQ5FYB0 599 aaPredicted RBP8.4□□□□□ -1.06
COPS3-205ENST00000463097 RELL1Q8IUW5 271 aa8.4□□□□□ -1.06
COPS3-205ENST00000463097 KIAA0825Q8IV33 1275 aa8.4□□□□□ -1.06
COPS3-205ENST00000463097 NLGN1Q8N2Q7 840 aa8.4□□□□□ -1.06
COPS3-205ENST00000463097 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
COPS3-205ENST00000463097 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
COPS3-205ENST00000463097 EGFRP00533 1210 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 SSBP05455 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
COPS3-205ENST00000463097 PWP1Q13610 501 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 WDR44Q5JSH3 913 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 NBPF6Q5VWK0 638 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 NLRP13Q86W25 1043 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 NBPF4Q96M43 638 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 ADAMTS1Q9UHI8 967 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 TRAK1Q9UPV9 953 aa8.39□□□□□ -1.07
COPS3-205ENST00000463097 CES1P23141 567 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
COPS3-205ENST00000463097 TYRO3Q06418 890 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
COPS3-205ENST00000463097 JAZF1Q86VZ6 243 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 C3orf58Q8NDZ4 430 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 GLIS3Q8NEA6 775 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 MRFAP1L1Q96HT8 127 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 EHD4Q9H223 541 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 C11orf16Q9NQ32 467 aa8.38□□□□□ -1.07
COPS3-205ENST00000463097 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
COPS3-205ENST00000463097 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
COPS3-205ENST00000463097 MSX1P28360 303 aa8.37□□□□□ -1.07
COPS3-205ENST00000463097 NASPP49321 788 aaPredicted RBP8.37□□□□□ -1.07
COPS3-205ENST00000463097 VEGFBP49765 207 aa8.37□□□□□ -1.07
COPS3-205ENST00000463097 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
COPS3-205ENST00000463097 PRICKLE2Q7Z3G6 844 aa8.37□□□□□ -1.07
COPS3-205ENST00000463097 CYP4X1Q8N118 509 aa8.37□□□□□ -1.07
COPS3-205ENST00000463097 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
COPS3-205ENST00000463097 A0A1B0GTH6 734 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 A0A1W2PNR3 127 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 A0A1W2PP55 124 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 GBP2P32456 591 aaPredicted RBP8.36□□□□□ -1.07
COPS3-205ENST00000463097 EIF4A3P38919 411 aaKnown RBP8.36□□□□□ -1.07
COPS3-205ENST00000463097 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 NFX1Q12986 1120 aaKnown RBP8.36□□□□□ -1.07
COPS3-205ENST00000463097 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 MKL1Q969V6 931 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 TMEM74Q96NL1 305 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 ZNF408Q9H9D4 720 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 GJA3Q9Y6H8 435 aa8.36□□□□□ -1.07
COPS3-205ENST00000463097 F6X3S4 739 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 UPP2O95045 317 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 RLBP1P12271 317 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 FCGRTP55899 365 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 SERINC3Q13530 473 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 LYSMD3Q7Z3D4 306 aa8.35□□□□□ -1.07
COPS3-205ENST00000463097 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms