RNA–Protein interactions for RNA: ENST00000463083.1

SMIM29-204, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-204ENST00000463083 CCDC152Q4G0S7 254 aa22.5■■□□□ 1.19
SMIM29-204ENST00000463083 SIRT2Q8IXJ6 389 aa22.5■■□□□ 1.19
SMIM29-204ENST00000463083 GREM2Q9H772 168 aa22.5■■□□□ 1.19
SMIM29-204ENST00000463083 HMMRO75330 724 aa22.49■■□□□ 1.19
SMIM29-204ENST00000463083 PTGER2P43116 358 aa22.49■■□□□ 1.19
SMIM29-204ENST00000463083 MTX1Q13505 466 aa22.49■■□□□ 1.19
SMIM29-204ENST00000463083 SGIP1Q9BQI5 828 aa22.49■■□□□ 1.19
SMIM29-204ENST00000463083 RIC1Q4ADV7 1423 aa22.48■■□□□ 1.19
SMIM29-204ENST00000463083 PDE6BP35913 854 aa22.48■■□□□ 1.19
SMIM29-204ENST00000463083 SF3B3Q15393 1217 aaKnown RBP22.48■■□□□ 1.19
SMIM29-204ENST00000463083 CCDC57Q2TAC2 916 aa22.48■■□□□ 1.19
SMIM29-204ENST00000463083 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
SMIM29-204ENST00000463083 IFIT5Q13325 482 aaKnown RBP22.47■■□□□ 1.19
SMIM29-204ENST00000463083 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
SMIM29-204ENST00000463083 ANKRD31Q8N7Z5 1873 aa22.47■■□□□ 1.19
SMIM29-204ENST00000463083 ITGA6P23229 1130 aa22.47■■□□□ 1.19
SMIM29-204ENST00000463083 KLHL34Q8N239 644 aa22.47■■□□□ 1.19
SMIM29-204ENST00000463083 RPGRQ92834 1020 aaKnown RBP22.47■■□□□ 1.19
SMIM29-204ENST00000463083 CCDC136Q96JN2 1154 aa22.47■■□□□ 1.19
SMIM29-204ENST00000463083 RWDD1Q9H446 243 aaPredicted RBP22.47■■□□□ 1.19
SMIM29-204ENST00000463083 ANKRD18BA2A2Z9 1011 aa22.46■■□□□ 1.19
SMIM29-204ENST00000463083 POLA2Q14181 598 aa22.46■■□□□ 1.19
SMIM29-204ENST00000463083 TAF7LQ5H9L4 462 aa22.46■■□□□ 1.19
SMIM29-204ENST00000463083 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
SMIM29-204ENST00000463083 SEC31BQ9NQW1 1179 aa22.46■■□□□ 1.19
SMIM29-204ENST00000463083 C10orf71Q711Q0 1435 aa22.45■■□□□ 1.18
SMIM29-204ENST00000463083 B4GALNT3Q6L9W6 998 aa22.45■■□□□ 1.18
SMIM29-204ENST00000463083 KLRG2A4D1S0 409 aaPredicted RBP22.44■■□□□ 1.18
SMIM29-204ENST00000463083 HDAC1Q13547 482 aaPredicted RBP22.44■■□□□ 1.18
SMIM29-204ENST00000463083 CRY2Q49AN0 593 aa22.44■■□□□ 1.18
SMIM29-204ENST00000463083 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
SMIM29-204ENST00000463083 C2CD5Q86YS7 1000 aa22.44■■□□□ 1.18
SMIM29-204ENST00000463083 KLHDC4Q8TBB5 520 aa22.44■■□□□ 1.18
SMIM29-204ENST00000463083 ZNF594Q96JF6 807 aaPredicted RBP22.44■■□□□ 1.18
SMIM29-204ENST00000463083 IGHDP01880 384 aa22.43■■□□□ 1.18
SMIM29-204ENST00000463083 RFX5P48382 616 aaPredicted RBP22.43■■□□□ 1.18
SMIM29-204ENST00000463083 RBM17Q96I25 401 aaKnown RBP22.43■■□□□ 1.18
SMIM29-204ENST00000463083 PA2G4Q9UQ80 394 aaKnown RBP22.43■■□□□ 1.18
SMIM29-204ENST00000463083 RTL9Q8NET4 1388 aa22.43■■□□□ 1.18
SMIM29-204ENST00000463083 H0YIN7 160 aa22.42■■□□□ 1.18
SMIM29-204ENST00000463083 SIL1Q9H173 461 aa22.42■■□□□ 1.18
SMIM29-204ENST00000463083 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
SMIM29-204ENST00000463083 SRGNP10124 158 aa22.41■■□□□ 1.18
SMIM29-204ENST00000463083 CHRNA5P30532 468 aa22.41■■□□□ 1.18
SMIM29-204ENST00000463083 CDC5LQ99459 802 aaKnown RBP22.41■■□□□ 1.18
SMIM29-204ENST00000463083 NPR1P16066 1061 aa22.41■■□□□ 1.18
SMIM29-204ENST00000463083 PTPN12Q05209 780 aaKnown RBP22.41■■□□□ 1.18
SMIM29-204ENST00000463083 ZNF622Q969S3 477 aaKnown RBP eCLIP22.41■■□□□ 1.18
SMIM29-204ENST00000463083 TAF1P21675 1872 aa22.4■■□□□ 1.18
SMIM29-204ENST00000463083 IGHMBP2P38935 993 aaKnown RBP22.4■■□□□ 1.18
SMIM29-204ENST00000463083 OS9Q13438 667 aaPredicted RBP22.4■■□□□ 1.18
SMIM29-204ENST00000463083 ANKRD18AQ8IVF6 992 aa22.4■■□□□ 1.18
SMIM29-204ENST00000463083 CELF1Q92879 486 aaKnown RBP22.4■■□□□ 1.18
SMIM29-204ENST00000463083 MASTLQ96GX5 879 aa22.4■■□□□ 1.18
SMIM29-204ENST00000463083 COPRSQ9NQ92 184 aa22.4■■□□□ 1.18
SMIM29-204ENST00000463083 PDZRN3Q9UPQ7 1066 aa22.4■■□□□ 1.18
SMIM29-204ENST00000463083 EXOC6BQ9Y2D4 811 aa22.4■■□□□ 1.18
SMIM29-204ENST00000463083 MPHOSPH8Q99549 860 aa22.39■■□□□ 1.17
SMIM29-204ENST00000463083 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
SMIM29-204ENST00000463083 KIF13BQ9NQT8 1826 aa22.39■■□□□ 1.17
SMIM29-204ENST00000463083 APBB1O00213 710 aa22.38■■□□□ 1.17
SMIM29-204ENST00000463083 HOXA10P31260 410 aaPredicted RBP22.38■■□□□ 1.17
SMIM29-204ENST00000463083 RPS8P62241 208 aaKnown RBP22.38■■□□□ 1.17
SMIM29-204ENST00000463083 G3BP1Q13283 466 aaKnown RBP eCLIP22.38■■□□□ 1.17
SMIM29-204ENST00000463083 GRAPQ13588 217 aa22.38■■□□□ 1.17
SMIM29-204ENST00000463083 LDHAL6AQ6ZMR3 332 aa22.38■■□□□ 1.17
SMIM29-204ENST00000463083 GRAPLQ8TC17 118 aaPredicted RBP22.38■■□□□ 1.17
SMIM29-204ENST00000463083 DCTPP1Q9H773 170 aa22.38■■□□□ 1.17
SMIM29-204ENST00000463083 CD2APQ9Y5K6 639 aa22.38■■□□□ 1.17
SMIM29-204ENST00000463083 A0A0G2JLW4 131 aa22.37■■□□□ 1.17
SMIM29-204ENST00000463083 DPEP1P16444 411 aa22.37■■□□□ 1.17
SMIM29-204ENST00000463083 CRAMP1Q96RY5 1269 aa22.37■■□□□ 1.17
SMIM29-204ENST00000463083 CNNM1Q9NRU3 951 aa22.37■■□□□ 1.17
SMIM29-204ENST00000463083 COL4A1P02462 1669 aa22.36■■□□□ 1.17
SMIM29-204ENST00000463083 ALDH1B1P30837 517 aa22.36■■□□□ 1.17
SMIM29-204ENST00000463083 TGFB2P61812 414 aa22.36■■□□□ 1.17
SMIM29-204ENST00000463083 STYK1Q6J9G0 422 aa22.36■■□□□ 1.17
SMIM29-204ENST00000463083 PUS3Q9BZE2 481 aaKnown RBP22.36■■□□□ 1.17
SMIM29-204ENST00000463083 NOP58Q9Y2X3 529 aaKnown RBP22.36■■□□□ 1.17
SMIM29-204ENST00000463083 SPEF2Q9C093 1822 aa22.36■■□□□ 1.17
SMIM29-204ENST00000463083 EYA2O00167 538 aa22.35■■□□□ 1.17
SMIM29-204ENST00000463083 LRRC24Q50LG9 513 aa22.35■■□□□ 1.17
SMIM29-204ENST00000463083 HSP90AB4PQ58FF6 505 aa22.35■■□□□ 1.17
SMIM29-204ENST00000463083 GCC1Q96CN9 775 aa22.35■■□□□ 1.17
SMIM29-204ENST00000463083 BCL11AQ9H165 835 aa22.34■■□□□ 1.17
SMIM29-204ENST00000463083 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
SMIM29-204ENST00000463083 BSDC1Q9NW68 430 aaPredicted RBP22.34■■□□□ 1.17
SMIM29-204ENST00000463083 BBOX1O75936 387 aa22.33■■□□□ 1.16
SMIM29-204ENST00000463083 CIAO1O76071 339 aa22.33■■□□□ 1.16
SMIM29-204ENST00000463083 CENPQQ7L2Z9 268 aaPredicted RBP22.33■■□□□ 1.16
SMIM29-204ENST00000463083 FHDC1Q9C0D6 1143 aaPredicted RBP22.33■■□□□ 1.16
SMIM29-204ENST00000463083 FBXO3Q9UK99 471 aa22.33■■□□□ 1.16
SMIM29-204ENST00000463083 PPEF1O14829 653 aaPredicted RBP22.32■■□□□ 1.16
SMIM29-204ENST00000463083 RAB11FIP3O75154 756 aa22.32■■□□□ 1.16
SMIM29-204ENST00000463083 IL15P40933 162 aaPredicted RBP22.32■■□□□ 1.16
SMIM29-204ENST00000463083 ATG9AQ7Z3C6 839 aa22.32■■□□□ 1.16
SMIM29-204ENST00000463083 SMC5Q8IY18 1101 aa22.32■■□□□ 1.16
SMIM29-204ENST00000463083 WWC3Q9ULE0 1092 aa22.32■■□□□ 1.16
SMIM29-204ENST00000463083 KDM2BQ8NHM5 1336 aa22.32■■□□□ 1.16
SMIM29-204ENST00000463083 CACNA1SQ13698 1873 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms