RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
COL6A1-202ENST00000463060 PARP3Q9Y6F1 533 aa17.9■□□□□ 0.46
COL6A1-202ENST00000463060 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
COL6A1-202ENST00000463060 HMMRO75330 724 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC24Q8N4L8 307 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
COL6A1-202ENST00000463060 NOP58Q9Y2X3 529 aaKnown RBP17.89■□□□□ 0.45
COL6A1-202ENST00000463060 PSDA5PKW4 1024 aaPredicted RBP17.88■□□□□ 0.45
COL6A1-202ENST00000463060 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
COL6A1-202ENST00000463060 NLRP3Q96P20 1036 aa17.88■□□□□ 0.45
COL6A1-202ENST00000463060 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
COL6A1-202ENST00000463060 COPRSQ9NQ92 184 aa17.88■□□□□ 0.45
COL6A1-202ENST00000463060 ZBTB7AO95365 584 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 CRY2Q49AN0 593 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 GREM2Q9H772 168 aa17.87■□□□□ 0.45
COL6A1-202ENST00000463060 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
COL6A1-202ENST00000463060 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
COL6A1-202ENST00000463060 ST5P78524 1137 aa17.86■□□□□ 0.45
COL6A1-202ENST00000463060 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
COL6A1-202ENST00000463060 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC152Q4G0S7 254 aa17.85■□□□□ 0.45
COL6A1-202ENST00000463060 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
COL6A1-202ENST00000463060 PA2G4Q9UQ80 394 aaKnown RBP17.85■□□□□ 0.45
COL6A1-202ENST00000463060 ITGA6P23229 1130 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC57Q2TAC2 916 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 KLHDC4Q8TBB5 520 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-202ENST00000463060 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
COL6A1-202ENST00000463060 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-202ENST00000463060 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
COL6A1-202ENST00000463060 PTGER2P43116 358 aa17.83■□□□□ 0.44
COL6A1-202ENST00000463060 ANKRD18BA2A2Z9 1011 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 NPHP1O15259 732 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
COL6A1-202ENST00000463060 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-202ENST00000463060 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 EXOC6BQ9Y2D4 811 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 COL4A1P02462 1669 aa17.82■□□□□ 0.44
COL6A1-202ENST00000463060 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
COL6A1-202ENST00000463060 RAB11FIP3O75154 756 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 CIAO1O76071 339 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 SASH1O94885 1247 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 SRGNP10124 158 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 PDE6BP35913 854 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 NUCB1Q02818 461 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 PUS3Q9BZE2 481 aaKnown RBP17.8■□□□□ 0.44
COL6A1-202ENST00000463060 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
COL6A1-202ENST00000463060 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 EYA2O00167 538 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 LRRC24Q50LG9 513 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 TAF1P21675 1872 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 LRP5O75197 1615 aa17.79■□□□□ 0.44
COL6A1-202ENST00000463060 POLD1P28340 1107 aa17.78■□□□□ 0.44
COL6A1-202ENST00000463060 RPS8P62241 208 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 G3BP1Q13283 466 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
COL6A1-202ENST00000463060 DDX46Q7L014 1031 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 CELF1Q92879 486 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 PDZRN3Q9UPQ7 1066 aa17.78■□□□□ 0.44
COL6A1-202ENST00000463060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
COL6A1-202ENST00000463060 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-202ENST00000463060 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
COL6A1-202ENST00000463060 SIL1Q9H173 461 aa17.77■□□□□ 0.44
COL6A1-202ENST00000463060 BSDC1Q9NW68 430 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-202ENST00000463060 COL11A2P13942 1736 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-202ENST00000463060 NPR1P16066 1061 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 GRAPQ13588 217 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-202ENST00000463060 KIF1BPQ96EK5 621 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 SPON1Q9HCB6 807 aa17.76■□□□□ 0.43
COL6A1-202ENST00000463060 KCNA3P22001 575 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 TAF7LQ5H9L4 462 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 STYK1Q6J9G0 422 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 CHD1LQ86WJ1 897 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 C2CD5Q86YS7 1000 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
COL6A1-202ENST00000463060 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
COL6A1-202ENST00000463060 LRRCC1Q9C099 1032 aa17.75■□□□□ 0.43
COL6A1-202ENST00000463060 H0YIN7 160 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-202ENST00000463060 BBOX1O75936 387 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 IGHMBP2P38935 993 aaKnown RBP17.74■□□□□ 0.43
COL6A1-202ENST00000463060 VGLL2Q8N8G2 317 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 KIAA1551Q9HCM1 1747 aa17.74■□□□□ 0.43
COL6A1-202ENST00000463060 PDE4AP27815 886 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 CHRNA5P30532 468 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 TGFB2P61812 414 aa17.73■□□□□ 0.43
COL6A1-202ENST00000463060 TFCP2Q12800 502 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms