RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TMEM74Q96NL1 305 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 DDX56Q9NY93 547 aaKnown RBP4.35□□□□□ -1.71
SMC4-203ENST00000462668 PRKAG3Q9UGI9 489 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 hCG_2014768A0A024R1R8 64 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 RGS20O76081 388 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 ITGBL1O95965 494 aaPredicted RBP4.35□□□□□ -1.71
SMC4-203ENST00000462668 USP17L7P0C7H9 530 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 GRM2Q14416 872 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 PPP1R26Q5T8A7 1209 aaPredicted RBP4.35□□□□□ -1.71
SMC4-203ENST00000462668 LILRB2Q8N423 598 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 CCDC24Q8N4L8 307 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 FOXD3Q9UJU5 478 aaPredicted RBP4.35□□□□□ -1.71
SMC4-203ENST00000462668 LOC102724159A0A0B4J2E5 919 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 CENPCQ03188 943 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 PWP2Q15269 919 aaKnown RBP4.35□□□□□ -1.71
SMC4-203ENST00000462668 TMC1Q8TDI8 760 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 L3MBTL2Q969R5 705 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 KLRG1Q96E93 195 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 PHACTR1Q9C0D0 580 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 KBTBD4Q9NVX7 518 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 GGT7Q9UJ14 662 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 NKX2-3Q8TAU0 364 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 ZNF516Q92618 1163 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 KANSL2Q9H9L4 492 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 KLK14Q9P0G3 267 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 FAN1Q9Y2M0 1017 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 CCDC194A0A1B0GVG4 234 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.34□□□□□ -1.71
SMC4-203ENST00000462668 GINM1Q9NU53 330 aa4.34□□□□□ -1.71
SMC4-203ENST00000462668 ROBO2Q9HCK4 1378 aa4.34□□□□□ -1.72
SMC4-203ENST00000462668 FAM221BA6H8Z2 402 aa4.34□□□□□ -1.72
SMC4-203ENST00000462668 DNM1Q05193 864 aaKnown RBP4.34□□□□□ -1.72
SMC4-203ENST00000462668 KIAA0825Q8IV33 1275 aa4.34□□□□□ -1.72
SMC4-203ENST00000462668 CCDC116Q8IYX3 515 aa4.34□□□□□ -1.72
SMC4-203ENST00000462668 SPC25Q9HBM1 224 aa4.34□□□□□ -1.72
SMC4-203ENST00000462668 MAGEC2Q9UBF1 373 aaPredicted RBP4.34□□□□□ -1.72
SMC4-203ENST00000462668 TXLNAP40222 546 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 GIPRP48546 466 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 RNF144AP50876 292 aaPredicted RBP4.33□□□□□ -1.72
SMC4-203ENST00000462668 RASGRF1Q13972 1273 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 CCDC84Q86UT8 332 aaPredicted RBP4.33□□□□□ -1.72
SMC4-203ENST00000462668 PHC3Q8NDX5 983 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 BCO2Q9BYV7 579 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 TMEM63CQ9P1W3 806 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 DNAJC6O75061 913 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 PDGFRBP09619 1106 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 EMP3P54852 163 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 PWP1Q13610 501 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 RNF187Q5TA31 235 aaPredicted RBP4.33□□□□□ -1.72
SMC4-203ENST00000462668 CNKSR1Q969H4 720 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 GEMIN8Q9NWZ8 242 aaKnown RBP4.33□□□□□ -1.72
SMC4-203ENST00000462668 GSTT1P30711 240 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 CASP7P55210 303 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 LHX8Q68G74 356 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 DEPDC7Q96QD5 511 aa4.33□□□□□ -1.72
SMC4-203ENST00000462668 RPS26P62854 115 aaKnown RBP4.32□□□□□ -1.72
SMC4-203ENST00000462668 ANKS3Q6ZW76 656 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 SUSD3Q96L08 255 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 U2SURPO15042 1029 aaKnown RBP4.32□□□□□ -1.72
SMC4-203ENST00000462668 FSHRP23945 695 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 PTGIRP43119 386 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 SQSTM1Q13501 440 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 TLR1Q15399 786 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 HIF1AQ16665 826 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 PEAR1Q5VY43 1037 aaPredicted RBP4.32□□□□□ -1.72
SMC4-203ENST00000462668 FBXL19Q6PCT2 694 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 CACNA2D2Q9NY47 1150 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 CHPF2Q9P2E5 772 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 LMNB2Q03252 620 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 OR6P1Q8NGX9 317 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 KCNQ4P56696 695 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 NOL8Q76FK4 1167 aaKnown RBP4.32□□□□□ -1.72
SMC4-203ENST00000462668 SH3TC2Q8TF17 1288 aa4.32□□□□□ -1.72
SMC4-203ENST00000462668 RLBP1P12271 317 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 MASP1P48740 699 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 C2orf27AQ580R0 203 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 RHBDD1Q8TEB9 315 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 ARHGEF10LQ9HCE6 1279 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 DZANK1Q9NVP4 752 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 EIF4A3P38919 411 aaKnown RBP4.31□□□□□ -1.72
SMC4-203ENST00000462668 WDR44Q5JSH3 913 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 SYNPOQ8N3V7 929 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 CHMP7Q8WUX9 453 aaPredicted RBP4.31□□□□□ -1.72
SMC4-203ENST00000462668 PMEPA1Q969W9 287 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 TCF12Q99081 682 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 ABCB6Q9NP58 842 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 CHMP3Q9Y3E7 222 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 A6NHS1 94 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 KIF4AO95239 1232 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 CAPNS1P04632 268 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 PCSK2P16519 638 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 NASPP49321 788 aaPredicted RBP4.31□□□□□ -1.72
SMC4-203ENST00000462668 FILIP1Q7Z7B0 1213 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 DHX37Q8IY37 1157 aaKnown RBP4.31□□□□□ -1.72
SMC4-203ENST00000462668 GPR152Q8TDT2 470 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 SPON2Q9BUD6 331 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 SALL4Q9UJQ4 1053 aa4.31□□□□□ -1.72
SMC4-203ENST00000462668 WNT7AO00755 349 aa4.3□□□□□ -1.72
SMC4-203ENST00000462668 ATP4AP20648 1035 aa4.3□□□□□ -1.72
SMC4-203ENST00000462668 TNNI3KQ59H18 835 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms