RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CHMP3Q9Y3E7 222 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 PAXBP1Q9Y5B6 917 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 ARHGAP23Q9P227 1491 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 SLIT1O75093 1534 aa4.15□□□□□ -1.75
COL8A1-204ENST00000462604 XRN1Q8IZH2 1706 aaKnown RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-204ENST00000462604 JCADQ9P266 1359 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 MED1Q15648 1581 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 A0A0D9SFI3 127 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 AP5Z1O43299 807 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CTIFO43310 598 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 HMGB1P09429 215 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 TNNT1P13805 278 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF165P49910 485 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 FGD1P98174 961 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 NEXNQ0ZGT2 675 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 RESTQ13127 1097 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 STK3Q13188 491 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 DHX8Q14562 1220 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 ZRSR1Q15695 479 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CAMK4Q16566 473 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 TPD52L1Q16890 204 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 TSGA10IPQ3SY00 556 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 ATL3Q6DD88 541 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 NAA16Q6N069 864 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 ZSCAN25Q6NSZ9 544 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 LARP1Q6PKG0 1096 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 SARM1Q6SZW1 724 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 RBM43Q6ZSC3 357 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC186Q7Z3E2 898 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CKAP2LQ8IYA6 745 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CEP57L1Q8IYX8 460 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 DDX54Q8TDD1 881 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 ANKRD7Q92527 254 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 TSC1Q92574 1164 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 BRF1Q92994 677 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 GTF3C6Q969F1 213 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 SUCLG2Q96I99 432 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF396Q96N95 335 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 FEZ1Q99689 392 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 LLPHQ9BRT6 129 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC8Q9H0W5 538 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 BOLA2Q9H3K6 86 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 BICC1Q9H694 974 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 LGR6Q9HBX8 967 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 SLC24A3Q9HC58 644 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 PRDM10Q9NQV6 1147 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 OGFRQ9NZT2 677 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 PRDM4Q9UKN5 801 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 PHF8Q9UPP1 1060 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 PA2G4Q9UQ80 394 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 CFAP65Q6ZU64 1925 aaKnown RBP4.14□□□□□ -1.75
COL8A1-204ENST00000462604 UTYO14607 1347 aa4.14□□□□□ -1.75
COL8A1-204ENST00000462604 NPHP4O75161 1426 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 MRC1P22897 1456 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 LMTK3Q96Q04 1460 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 BECN2A8MW95 431 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 KIF2AO00139 706 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 KCNQ3O43525 872 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NRDCO43847 1150 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 KINO60870 393 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NR1I2O75469 434 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 KIF20AO95235 890 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 ANXA1P04083 346 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 ATP5JP18859 108 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 GSDMDP57764 484 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 TPM4P67936 248 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 CBX1P83916 185 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NCBP1Q09161 790 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 TOB2Q14106 344 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 CWF19L2Q2TBE0 894 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NBPF6Q5VWK0 638 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 USPL1Q5W0Q7 1092 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 CEP135Q66GS9 1140 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 RIC3Q7Z5B4 369 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 TICAM2Q86XR7 235 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 EAF2Q96CJ1 260 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 MRFAP1L1Q96HT8 127 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NBPF4Q96M43 638 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 C16orf45Q96MC5 204 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NEK1Q96PY6 1258 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 NAT10Q9H0A0 1025 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 SIL1Q9H173 461 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 DNAJC25Q9H1X3 360 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 DDX21Q9NR30 783 aaKnown RBP eCLIP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 ANO10Q9NW15 660 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 TLR7Q9NYK1 1049 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 TFIP11Q9UBB9 837 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 MAP2P11137 1827 aaKnown RBP4.13□□□□□ -1.75
COL8A1-204ENST00000462604 HEG1Q9ULI3 1381 aa4.13□□□□□ -1.75
COL8A1-204ENST00000462604 UBR1Q8IWV7 1749 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 CRYBG1Q9Y4K1 1723 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 NFAT5O94916 1531 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 PTPDC1A2A3K4 754 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 FAM177BA6PVY3 158 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 JAK2O60674 1132 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 PFKFB2O60825 505 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 TAF5LO75529 589 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 SASH1O94885 1247 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms