RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
RTF1-202ENST00000462276 POLD1P28340 1107 aa13.25□□□□□ -0.29
RTF1-202ENST00000462276 R3HDM1Q15032 1099 aaKnown RBP13.25□□□□□ -0.29
RTF1-202ENST00000462276 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
RTF1-202ENST00000462276 SYNE4Q8N205 404 aa13.25□□□□□ -0.29
RTF1-202ENST00000462276 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
RTF1-202ENST00000462276 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
RTF1-202ENST00000462276 ANKRD18BA2A2Z9 1011 aa13.24□□□□□ -0.29
RTF1-202ENST00000462276 IGHDP01880 384 aa13.24□□□□□ -0.29
RTF1-202ENST00000462276 PDE6BP35913 854 aa13.24□□□□□ -0.29
RTF1-202ENST00000462276 CDC5LQ99459 802 aaKnown RBP13.24□□□□□ -0.29
RTF1-202ENST00000462276 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
RTF1-202ENST00000462276 CHMP3Q9Y3E7 222 aa13.24□□□□□ -0.29
RTF1-202ENST00000462276 BCORQ6W2J9 1755 aa13.23□□□□□ -0.29
RTF1-202ENST00000462276 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
RTF1-202ENST00000462276 CIAO1O76071 339 aa13.23□□□□□ -0.29
RTF1-202ENST00000462276 RFX5P48382 616 aaPredicted RBP13.23□□□□□ -0.29
RTF1-202ENST00000462276 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
RTF1-202ENST00000462276 CRY2Q49AN0 593 aa13.23□□□□□ -0.29
RTF1-202ENST00000462276 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
RTF1-202ENST00000462276 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
RTF1-202ENST00000462276 ITGA6P23229 1130 aa13.22□□□□□ -0.29
RTF1-202ENST00000462276 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
RTF1-202ENST00000462276 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
RTF1-202ENST00000462276 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
RTF1-202ENST00000462276 GREM2Q9H772 168 aa13.22□□□□□ -0.29
RTF1-202ENST00000462276 NUP98P52948 1817 aa13.22□□□□□ -0.29
RTF1-202ENST00000462276 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
RTF1-202ENST00000462276 IGHMBP2P38935 993 aaKnown RBP13.21□□□□□ -0.29
RTF1-202ENST00000462276 IL15P40933 162 aaPredicted RBP13.21□□□□□ -0.29
RTF1-202ENST00000462276 FAM161AQ3B820 660 aa13.21□□□□□ -0.29
RTF1-202ENST00000462276 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
RTF1-202ENST00000462276 KIF1BPQ96EK5 621 aa13.21□□□□□ -0.29
RTF1-202ENST00000462276 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
RTF1-202ENST00000462276 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 C4AP0C0L4 1744 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
RTF1-202ENST00000462276 EYA2O00167 538 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 BBOX1O75936 387 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
RTF1-202ENST00000462276 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
RTF1-202ENST00000462276 ANKRD18AQ8IVF6 992 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
RTF1-202ENST00000462276 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
RTF1-202ENST00000462276 CRAMP1Q96RY5 1269 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
RTF1-202ENST00000462276 ZBTB7AO95365 584 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 NPR1P16066 1061 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 NUCB1Q02818 461 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
RTF1-202ENST00000462276 ANKRD36CQ5JPF3 1778 aa13.19□□□□□ -0.3
RTF1-202ENST00000462276 H0YIN7 160 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 SRGNP10124 158 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 GRAPQ13588 217 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 STYK1Q6J9G0 422 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
RTF1-202ENST00000462276 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 GPR108Q9NPR9 543 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 EXOC6BQ9Y2D4 811 aa13.18□□□□□ -0.3
RTF1-202ENST00000462276 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 TGFB2P61812 414 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 CLASRPQ8N2M8 674 aaKnown RBP13.17□□□□□ -0.3
RTF1-202ENST00000462276 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
RTF1-202ENST00000462276 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
RTF1-202ENST00000462276 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
RTF1-202ENST00000462276 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 RIPOR2Q9Y4F9 1068 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
RTF1-202ENST00000462276 ATG9AQ7Z3C6 839 aa13.16□□□□□ -0.3
RTF1-202ENST00000462276 CCDC24Q8N4L8 307 aa13.16□□□□□ -0.3
RTF1-202ENST00000462276 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
RTF1-202ENST00000462276 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
RTF1-202ENST00000462276 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
RTF1-202ENST00000462276 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
RTF1-202ENST00000462276 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
RTF1-202ENST00000462276 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
RTF1-202ENST00000462276 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
RTF1-202ENST00000462276 SIL1Q9H173 461 aa13.15□□□□□ -0.3
RTF1-202ENST00000462276 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
RTF1-202ENST00000462276 SASH1O94885 1247 aa13.14□□□□□ -0.31
RTF1-202ENST00000462276 PTGER2P43116 358 aa13.14□□□□□ -0.31
RTF1-202ENST00000462276 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
RTF1-202ENST00000462276 CC2D2BQ6DHV5 1058 aa13.14□□□□□ -0.31
RTF1-202ENST00000462276 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
RTF1-202ENST00000462276 C10orf71Q711Q0 1435 aa13.13□□□□□ -0.31
RTF1-202ENST00000462276 PDE8BO95263 885 aa13.13□□□□□ -0.31
RTF1-202ENST00000462276 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
RTF1-202ENST00000462276 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms