RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 TAF7Q15545 349 aaPredicted RBP20.35■□□□□ 0.85
APP-211ENST00000462267 TTLL7Q6ZT98 887 aa20.35■□□□□ 0.85
APP-211ENST00000462267 KRT26Q7Z3Y9 468 aa20.35■□□□□ 0.85
APP-211ENST00000462267 PPP1R42Q7Z4L9 355 aa20.35■□□□□ 0.85
APP-211ENST00000462267 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
APP-211ENST00000462267 MICALL2Q8IY33 904 aa20.35■□□□□ 0.85
APP-211ENST00000462267 MPNDQ8N594 471 aa20.35■□□□□ 0.85
APP-211ENST00000462267 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
APP-211ENST00000462267 DPF2Q92785 391 aa20.34■□□□□ 0.85
APP-211ENST00000462267 ZBTB3Q9H5J0 574 aa20.34■□□□□ 0.85
APP-211ENST00000462267 ABCC4O15439 1325 aa20.33■□□□□ 0.85
APP-211ENST00000462267 SHTN1A0MZ66 631 aa20.33■□□□□ 0.85
APP-211ENST00000462267 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
APP-211ENST00000462267 REM2Q8IYK8 340 aaPredicted RBP20.33■□□□□ 0.85
APP-211ENST00000462267 GCC1Q96CN9 775 aa20.33■□□□□ 0.85
APP-211ENST00000462267 RRP7AQ9Y3A4 280 aaKnown RBP20.33■□□□□ 0.85
APP-211ENST00000462267 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
APP-211ENST00000462267 PKN2Q16513 984 aaKnown RBP20.32■□□□□ 0.84
APP-211ENST00000462267 DLK2Q6UY11 383 aa20.32■□□□□ 0.84
APP-211ENST00000462267 GIGYF2Q6Y7W6 1299 aaKnown RBP20.32■□□□□ 0.84
APP-211ENST00000462267 CSRNP1Q96S65 589 aa20.32■□□□□ 0.84
APP-211ENST00000462267 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
APP-211ENST00000462267 YDJCA8MPS7 323 aa20.31■□□□□ 0.84
APP-211ENST00000462267 SLC10A3P09131 477 aa20.31■□□□□ 0.84
APP-211ENST00000462267 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
APP-211ENST00000462267 NUDCQ9Y266 331 aa20.31■□□□□ 0.84
APP-211ENST00000462267 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
APP-211ENST00000462267 SAMD7Q7Z3H4 446 aa20.3■□□□□ 0.84
APP-211ENST00000462267 DCPSQ96C86 337 aaKnown RBP20.3■□□□□ 0.84
APP-211ENST00000462267 MIS18AQ9NYP9 233 aa20.3■□□□□ 0.84
APP-211ENST00000462267 MYL6BP14649 208 aa20.29■□□□□ 0.84
APP-211ENST00000462267 PNISRQ8TF01 805 aaKnown RBP20.29■□□□□ 0.84
APP-211ENST00000462267 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
APP-211ENST00000462267 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
APP-211ENST00000462267 TBC1D10BQ4KMP7 808 aaPredicted RBP20.28■□□□□ 0.84
APP-211ENST00000462267 ZBTB12Q9Y330 459 aaPredicted RBP20.28■□□□□ 0.84
APP-211ENST00000462267 ADM5C9JUS6 153 aa20.27■□□□□ 0.84
APP-211ENST00000462267 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
APP-211ENST00000462267 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
APP-211ENST00000462267 PSMD14O00487 310 aa20.26■□□□□ 0.83
APP-211ENST00000462267 RPS12P25398 132 aaKnown RBP20.26■□□□□ 0.83
APP-211ENST00000462267 TMC4Q7Z404 712 aa20.26■□□□□ 0.83
APP-211ENST00000462267 ERBB4Q15303 1308 aa20.26■□□□□ 0.83
APP-211ENST00000462267 EGFRP00533 1210 aa20.25■□□□□ 0.83
APP-211ENST00000462267 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
APP-211ENST00000462267 GRAPQ13588 217 aa20.25■□□□□ 0.83
APP-211ENST00000462267 DDX46Q7L014 1031 aaKnown RBP20.25■□□□□ 0.83
APP-211ENST00000462267 GRAPLQ8TC17 118 aaPredicted RBP20.25■□□□□ 0.83
APP-211ENST00000462267 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
APP-211ENST00000462267 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
APP-211ENST00000462267 SULF1Q8IWU6 871 aa20.24■□□□□ 0.83
APP-211ENST00000462267 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
APP-211ENST00000462267 RBM26Q5T8P6 1007 aaKnown RBP20.23■□□□□ 0.83
APP-211ENST00000462267 RASAL3Q86YV0 1011 aa20.23■□□□□ 0.83
APP-211ENST00000462267 POLR2AP24928 1970 aaKnown RBP20.22■□□□□ 0.83
APP-211ENST00000462267 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
APP-211ENST00000462267 FKBP1BP68106 108 aa20.21■□□□□ 0.83
APP-211ENST00000462267 KIF4BQ2VIQ3 1234 aa20.21■□□□□ 0.83
APP-211ENST00000462267 HABP4Q5JVS0 413 aaKnown RBP20.21■□□□□ 0.83
APP-211ENST00000462267 ZNF296Q8WUU4 475 aaPredicted RBP20.21■□□□□ 0.83
APP-211ENST00000462267 CDCA5Q96FF9 252 aa20.21■□□□□ 0.83
APP-211ENST00000462267 DUOX1Q9NRD9 1551 aa20.21■□□□□ 0.83
APP-211ENST00000462267 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
APP-211ENST00000462267 DBNDD1Q9H9R9 158 aa20.2■□□□□ 0.82
APP-211ENST00000462267 GGA3Q9NZ52 723 aa20.2■□□□□ 0.82
APP-211ENST00000462267 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
APP-211ENST00000462267 HSP90AB3PQ58FF7 597 aa20.19■□□□□ 0.82
APP-211ENST00000462267 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
APP-211ENST00000462267 FBXO46Q6PJ61 603 aaPredicted RBP20.19■□□□□ 0.82
APP-211ENST00000462267 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
APP-211ENST00000462267 NSFL1CQ9UNZ2 370 aaKnown RBP20.18■□□□□ 0.82
APP-211ENST00000462267 KDM3BQ7LBC6 1761 aa20.18■□□□□ 0.82
APP-211ENST00000462267 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
APP-211ENST00000462267 ECE2O60344 883 aa20.17■□□□□ 0.82
APP-211ENST00000462267 TBC1D8O95759 1140 aa20.17■□□□□ 0.82
APP-211ENST00000462267 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
APP-211ENST00000462267 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
APP-211ENST00000462267 RTL9Q8NET4 1388 aa20.17■□□□□ 0.82
APP-211ENST00000462267 LAMB2P55268 1798 aa20.16■□□□□ 0.82
APP-211ENST00000462267 C6orf229H3BNL8 230 aa20.16■□□□□ 0.82
APP-211ENST00000462267 EYA3Q99504 573 aa20.16■□□□□ 0.82
APP-211ENST00000462267 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
APP-211ENST00000462267 KCNQ5Q9NR82 932 aa20.16■□□□□ 0.82
APP-211ENST00000462267 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
APP-211ENST00000462267 GPR25O00155 361 aa20.15■□□□□ 0.82
APP-211ENST00000462267 NEFMP07197 916 aa20.15■□□□□ 0.82
APP-211ENST00000462267 VIL1P09327 827 aaKnown RBP20.15■□□□□ 0.82
APP-211ENST00000462267 PDIA6Q15084 440 aa20.15■□□□□ 0.82
APP-211ENST00000462267 POLLQ9UGP5 575 aa20.15■□□□□ 0.82
APP-211ENST00000462267 ASTN2O75129 1339 aaPredicted RBP20.15■□□□□ 0.82
APP-211ENST00000462267 LRRC37AA6NMS7 1700 aa20.15■□□□□ 0.82
APP-211ENST00000462267 TM4SF4P48230 202 aa20.13■□□□□ 0.81
APP-211ENST00000462267 DOK7Q18PE1 504 aa20.13■□□□□ 0.81
APP-211ENST00000462267 ANGEL2Q5VTE6 544 aaKnown RBP20.13■□□□□ 0.81
APP-211ENST00000462267 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
APP-211ENST00000462267 PAPPA2Q9BXP8 1791 aa20.13■□□□□ 0.81
APP-211ENST00000462267 ZNF280AP59817 542 aaPredicted RBP20.12■□□□□ 0.81
APP-211ENST00000462267 GPSM2P81274 684 aa20.12■□□□□ 0.81
APP-211ENST00000462267 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
APP-211ENST00000462267 SCARF1Q14162 830 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms