RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 G3BP1Q13283 466 aaKnown RBP eCLIP21.84■■□□□ 1.09
HPS3-204ENST00000462030 IP6K1Q92551 441 aa21.84■■□□□ 1.09
HPS3-204ENST00000462030 DNAJC25Q9H1X3 360 aa21.84■■□□□ 1.09
HPS3-204ENST00000462030 JAK2O60674 1132 aa21.83■■□□□ 1.09
HPS3-204ENST00000462030 ZSCAN25Q6NSZ9 544 aa21.83■■□□□ 1.09
HPS3-204ENST00000462030 TDRD7Q8NHU6 1098 aaKnown RBP21.83■■□□□ 1.09
HPS3-204ENST00000462030 BICD2Q8TD16 824 aa21.83■■□□□ 1.08
HPS3-204ENST00000462030 LRRC59Q96AG4 307 aaKnown RBP21.83■■□□□ 1.08
HPS3-204ENST00000462030 GRM8O00222 908 aa21.82■■□□□ 1.08
HPS3-204ENST00000462030 AKAP4Q5JQC9 854 aa21.82■■□□□ 1.08
HPS3-204ENST00000462030 KLHDC4Q8TBB5 520 aa21.82■■□□□ 1.08
HPS3-204ENST00000462030 EDC3Q96F86 508 aaKnown RBP21.82■■□□□ 1.08
HPS3-204ENST00000462030 ALDH8A1Q9H2A2 487 aaPredicted RBP21.82■■□□□ 1.08
HPS3-204ENST00000462030 GIGYF1O75420 1035 aaPredicted RBP21.81■■□□□ 1.08
HPS3-204ENST00000462030 ZNF165P49910 485 aa21.81■■□□□ 1.08
HPS3-204ENST00000462030 NCBP1Q09161 790 aaKnown RBP21.81■■□□□ 1.08
HPS3-204ENST00000462030 PXDNQ92626 1479 aa21.81■■□□□ 1.08
HPS3-204ENST00000462030 JCADQ9P266 1359 aa21.81■■□□□ 1.08
HPS3-204ENST00000462030 DDX11Q96FC9 970 aa21.8■■□□□ 1.08
HPS3-204ENST00000462030 SLIT1O75093 1534 aa21.8■■□□□ 1.08
HPS3-204ENST00000462030 CCDC144BQ3MJ40 725 aa21.8■■□□□ 1.08
HPS3-204ENST00000462030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.8■■□□□ 1.08
HPS3-204ENST00000462030 CCDC144CPQ8IYA2 1237 aa21.8■■□□□ 1.08
HPS3-204ENST00000462030 BRF1Q92994 677 aa21.8■■□□□ 1.08
HPS3-204ENST00000462030 RNMTO43148 476 aaKnown RBP21.79■■□□□ 1.08
HPS3-204ENST00000462030 KCNA6P17658 529 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 RESTQ13127 1097 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 LINS1Q8NG48 757 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 CACTINQ8WUQ7 758 aaKnown RBP21.79■■□□□ 1.08
HPS3-204ENST00000462030 CLIP2Q9UDT6 1046 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 ARHGAP23Q9P227 1491 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 COL15A1P39059 1388 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 TAF5LO75529 589 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 TNNT1P13805 278 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 AIMP1Q12904 312 aaKnown RBP21.79■■□□□ 1.08
HPS3-204ENST00000462030 GTF3C6Q969F1 213 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 HDAC5Q9UQL6 1122 aa21.79■■□□□ 1.08
HPS3-204ENST00000462030 NFAT5O94916 1531 aa21.78■■□□□ 1.08
HPS3-204ENST00000462030 HMG20BQ9P0W2 317 aa21.78■■□□□ 1.08
HPS3-204ENST00000462030 SMTNL1A8MU46 457 aa21.78■■□□□ 1.08
HPS3-204ENST00000462030 UTYO14607 1347 aa21.77■■□□□ 1.08
HPS3-204ENST00000462030 TSGA10IPQ3SY00 556 aa21.77■■□□□ 1.08
HPS3-204ENST00000462030 NAA30Q147X3 362 aaPredicted RBP21.77■■□□□ 1.07
HPS3-204ENST00000462030 CHGBP05060 677 aa21.76■■□□□ 1.07
HPS3-204ENST00000462030 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
HPS3-204ENST00000462030 GTPBP4Q9BZE4 634 aaKnown RBP21.76■■□□□ 1.07
HPS3-204ENST00000462030 HEG1Q9ULI3 1381 aa21.76■■□□□ 1.07
HPS3-204ENST00000462030 NDUFB9Q9Y6M9 179 aa21.75■■□□□ 1.07
HPS3-204ENST00000462030 CEBPZQ03701 1054 aaKnown RBP21.75■■□□□ 1.07
HPS3-204ENST00000462030 USPL1Q5W0Q7 1092 aa21.75■■□□□ 1.07
HPS3-204ENST00000462030 C11orf57Q6ZUT1 292 aaPredicted RBP21.75■■□□□ 1.07
HPS3-204ENST00000462030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.74■■□□□ 1.07
HPS3-204ENST00000462030 IGKV5-2P06315 115 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 Q6ZUG5 572 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 H3BQV1 296 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
HPS3-204ENST00000462030 ARID5BQ14865 1188 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 IQCB1Q15051 598 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 TPD52L1Q16890 204 aaPredicted RBP21.74■■□□□ 1.07
HPS3-204ENST00000462030 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 IFFO2Q5TF58 517 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 CCDC129Q6ZRS4 1044 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 NEK1Q96PY6 1258 aa21.74■■□□□ 1.07
HPS3-204ENST00000462030 KIF13AQ9H1H9 1805 aa21.73■■□□□ 1.07
HPS3-204ENST00000462030 EPHA10Q5JZY3 1008 aa21.73■■□□□ 1.07
HPS3-204ENST00000462030 LRRC2Q9BYS8 371 aa21.73■■□□□ 1.07
HPS3-204ENST00000462030 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
HPS3-204ENST00000462030 FTOQ9C0B1 505 aaKnown RBP eCLIP21.73■■□□□ 1.07
HPS3-204ENST00000462030 CDC25BP30305 580 aa21.72■■□□□ 1.07
HPS3-204ENST00000462030 FOSBP53539 338 aa21.72■■□□□ 1.07
HPS3-204ENST00000462030 MRC1P22897 1456 aa21.72■■□□□ 1.07
HPS3-204ENST00000462030 KRT32Q14532 448 aa21.72■■□□□ 1.07
HPS3-204ENST00000462030 SEC62Q99442 399 aaKnown RBP21.72■■□□□ 1.07
HPS3-204ENST00000462030 BCL11BQ9C0K0 894 aaPredicted RBP21.72■■□□□ 1.07
HPS3-204ENST00000462030 MYH15Q9Y2K3 1946 aa21.72■■□□□ 1.07
HPS3-204ENST00000462030 A0A087WWV3 80 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 USP27XA6NNY8 438 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 DDX58O95786 925 aaKnown RBP21.71■■□□□ 1.07
HPS3-204ENST00000462030 SCRN1Q12765 414 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 PDIA6Q15084 440 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 SYCP1Q15431 976 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 CCDC112Q8NEF3 446 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
HPS3-204ENST00000462030 ZNF609O15014 1411 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 LRRC8AQ8IWT6 810 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 DBNLQ9UJU6 430 aaKnown RBP21.71■■□□□ 1.07
HPS3-204ENST00000462030 NCAPD2Q15021 1401 aa21.71■■□□□ 1.07
HPS3-204ENST00000462030 GOLGA6L19H0YKK7 550 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 CYP21A2P08686 494 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 AMOTQ4VCS5 1084 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 ZNF592Q92610 1267 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 CTNNA3Q9UI47 895 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 PAXBP1Q9Y5B6 917 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 IGSF3O75054 1194 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 ADD1P35611 737 aaKnown RBP21.7■■□□□ 1.06
HPS3-204ENST00000462030 RIC3Q7Z5B4 369 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 FEZ1Q99689 392 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 GOLPH3LQ9H4A5 285 aa21.7■■□□□ 1.06
HPS3-204ENST00000462030 ZSCAN16Q9H4T2 348 aaPredicted RBP21.7■■□□□ 1.06
HPS3-204ENST00000462030 CFAP45Q9UL16 551 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms