RNA–Protein interactions for RNA: ENST00000461830.6

RFWD2-206, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 5

Gene RFWD2, Length 2,131 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-206ENST00000461830 ALDH1B1P30837 517 aa9.17□□□□□ -0.94
RFWD2-206ENST00000461830 C3orf67Q6ZVT6 689 aa9.17□□□□□ -0.94
RFWD2-206ENST00000461830 FRAT1Q92837 279 aaPredicted RBP9.17□□□□□ -0.94
RFWD2-206ENST00000461830 RBM17Q96I25 401 aaKnown RBP9.17□□□□□ -0.94
RFWD2-206ENST00000461830 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
RFWD2-206ENST00000461830 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
RFWD2-206ENST00000461830 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
RFWD2-206ENST00000461830 ALDH1L1O75891 902 aa9.16□□□□□ -0.94
RFWD2-206ENST00000461830 PRPF40BQ6NWY9 871 aaKnown RBP9.16□□□□□ -0.94
RFWD2-206ENST00000461830 UBE3BQ7Z3V4 1068 aa9.16□□□□□ -0.94
RFWD2-206ENST00000461830 PDE8AO60658 829 aa9.16□□□□□ -0.94
RFWD2-206ENST00000461830 DDX46Q7L014 1031 aaKnown RBP9.16□□□□□ -0.94
RFWD2-206ENST00000461830 C9orf78Q9NZ63 289 aaPredicted RBP9.16□□□□□ -0.94
RFWD2-206ENST00000461830 ZNF219Q9P2Y4 722 aaPredicted RBP9.16□□□□□ -0.94
RFWD2-206ENST00000461830 CACNA1SQ13698 1873 aa9.15□□□□□ -0.94
RFWD2-206ENST00000461830 ARFGEF1Q9Y6D6 1849 aa9.15□□□□□ -0.94
RFWD2-206ENST00000461830 H7C1W4 665 aa9.15□□□□□ -0.94
RFWD2-206ENST00000461830 HOXA10P31260 410 aaPredicted RBP9.15□□□□□ -0.94
RFWD2-206ENST00000461830 ARHGAP27Q6ZUM4 889 aa9.15□□□□□ -0.94
RFWD2-206ENST00000461830 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.94
RFWD2-206ENST00000461830 GRM8O00222 908 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 C21orf2O43822 256 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 CCT4P50991 539 aaKnown RBP9.14□□□□□ -0.95
RFWD2-206ENST00000461830 SF3B3Q15393 1217 aaKnown RBP9.14□□□□□ -0.95
RFWD2-206ENST00000461830 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 DHX37Q8IY37 1157 aaKnown RBP9.14□□□□□ -0.95
RFWD2-206ENST00000461830 CRAMP1Q96RY5 1269 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 ABCC4O15439 1325 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
RFWD2-206ENST00000461830 CTSWP56202 376 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 SOGA3Q5TF21 947 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 ZKSCAN2Q63HK3 967 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 ATF7IPQ6VMQ6 1270 aa9.14□□□□□ -0.95
RFWD2-206ENST00000461830 BBXQ8WY36 941 aaPredicted RBP9.14□□□□□ -0.95
RFWD2-206ENST00000461830 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
RFWD2-206ENST00000461830 TRIM27P14373 513 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 CASP7P55210 303 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
RFWD2-206ENST00000461830 TMX4Q9H1E5 349 aaPredicted RBP9.13□□□□□ -0.95
RFWD2-206ENST00000461830 RCAN3Q9UKA8 241 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 BRD2P25440 801 aaKnown RBP9.13□□□□□ -0.95
RFWD2-206ENST00000461830 GRAPQ13588 217 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 CCDC93Q567U6 631 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 GRAPLQ8TC17 118 aaPredicted RBP9.13□□□□□ -0.95
RFWD2-206ENST00000461830 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 SLX4Q8IY92 1834 aa9.13□□□□□ -0.95
RFWD2-206ENST00000461830 FTSJ3Q8IY81 847 aaKnown RBP9.12□□□□□ -0.95
RFWD2-206ENST00000461830 PLA2G12BQ9BX93 195 aa9.12□□□□□ -0.95
RFWD2-206ENST00000461830 BBOX1O75936 387 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 NBPF7P0C2Y1 421 aaPredicted RBP9.11□□□□□ -0.95
RFWD2-206ENST00000461830 TTLL11Q8NHH1 800 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 TNNQ9UQP3 1299 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 UTYO14607 1347 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 RASSF7Q02833 373 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
RFWD2-206ENST00000461830 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 OLFM4Q6UX06 510 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 TMC4Q7Z404 712 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 CELF1Q92879 486 aaKnown RBP9.11□□□□□ -0.95
RFWD2-206ENST00000461830 CDC5LQ99459 802 aaKnown RBP9.11□□□□□ -0.95
RFWD2-206ENST00000461830 GREM2Q9H772 168 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
RFWD2-206ENST00000461830 MYH3P11055 1940 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 RTL9Q8NET4 1388 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 FOXO4P98177 505 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 DZIP1LQ8IYY4 767 aaKnown RBP9.1□□□□□ -0.95
RFWD2-206ENST00000461830 RTKN2Q8IZC4 609 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 SUCLG2Q96I99 432 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 USP44Q9H0E7 712 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 ATP6V0A2Q9Y487 856 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 NFKBIEO00221 500 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 CSF1RP07333 972 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 UBTFL1P0CB47 393 aaPredicted RBP9.1□□□□□ -0.95
RFWD2-206ENST00000461830 ITGA6P23229 1130 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 RPS8P62241 208 aaKnown RBP9.1□□□□□ -0.95
RFWD2-206ENST00000461830 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 LMBR1LQ6UX01 489 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 ANKRD18AQ8IVF6 992 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 SP8Q8IXZ3 490 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 TMEM57Q8N5G2 664 aa9.1□□□□□ -0.95
RFWD2-206ENST00000461830 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.1□□□□□ -0.95
RFWD2-206ENST00000461830 ANKRD18BA2A2Z9 1011 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 MS4A1P11836 297 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 YY1P25490 414 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 IGHMBP2P38935 993 aaKnown RBP9.09□□□□□ -0.95
RFWD2-206ENST00000461830 FKBP4Q02790 459 aaKnown RBP eCLIP9.09□□□□□ -0.95
RFWD2-206ENST00000461830 EPHA10Q5JZY3 1008 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 BICC1Q9H694 974 aaKnown RBP9.09□□□□□ -0.95
RFWD2-206ENST00000461830 HDAC5Q9UQL6 1122 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 COL4A1P02462 1669 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 LTBP3Q9NS15 1303 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 TAF1P21675 1872 aa9.09□□□□□ -0.95
RFWD2-206ENST00000461830 GOLGB1Q14789 3259 aaKnown RBP9.08□□□□□ -0.96
RFWD2-206ENST00000461830 GNAI3P08754 354 aa9.08□□□□□ -0.96
RFWD2-206ENST00000461830 LMNB1P20700 586 aa9.08□□□□□ -0.96
RFWD2-206ENST00000461830 IFIT5Q13325 482 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms