RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 PPP1R1BQ9UD71 204 aaPredicted RBP12.16□□□□□ -0.46
C9orf78-203ENST00000461539 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
C9orf78-203ENST00000461539 PTGER2P43116 358 aa12.15□□□□□ -0.46
C9orf78-203ENST00000461539 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
C9orf78-203ENST00000461539 POLA2Q14181 598 aa12.15□□□□□ -0.46
C9orf78-203ENST00000461539 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
C9orf78-203ENST00000461539 SSH3Q8TE77 659 aa12.15□□□□□ -0.46
C9orf78-203ENST00000461539 RPGRQ92834 1020 aaKnown RBP12.15□□□□□ -0.46
C9orf78-203ENST00000461539 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
C9orf78-203ENST00000461539 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
C9orf78-203ENST00000461539 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
C9orf78-203ENST00000461539 IGHDP01880 384 aa12.14□□□□□ -0.47
C9orf78-203ENST00000461539 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
C9orf78-203ENST00000461539 KLHDC4Q8TBB5 520 aa12.14□□□□□ -0.47
C9orf78-203ENST00000461539 RBM17Q96I25 401 aaKnown RBP12.14□□□□□ -0.47
C9orf78-203ENST00000461539 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
C9orf78-203ENST00000461539 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
C9orf78-203ENST00000461539 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
C9orf78-203ENST00000461539 KLRG2A4D1S0 409 aaPredicted RBP12.13□□□□□ -0.47
C9orf78-203ENST00000461539 H0YIN7 160 aa12.13□□□□□ -0.47
C9orf78-203ENST00000461539 SURF6O75683 361 aaKnown RBP12.13□□□□□ -0.47
C9orf78-203ENST00000461539 IGHMBP2P38935 993 aaKnown RBP12.13□□□□□ -0.47
C9orf78-203ENST00000461539 RFX5P48382 616 aaPredicted RBP12.13□□□□□ -0.47
C9orf78-203ENST00000461539 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
C9orf78-203ENST00000461539 CRY2Q49AN0 593 aa12.13□□□□□ -0.47
C9orf78-203ENST00000461539 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
C9orf78-203ENST00000461539 ZNF622Q969S3 477 aaKnown RBP eCLIP12.13□□□□□ -0.474e-10■■□□□ 11.7
C9orf78-203ENST00000461539 ZNF594Q96JF6 807 aaPredicted RBP12.13□□□□□ -0.47
C9orf78-203ENST00000461539 SIL1Q9H173 461 aa12.13□□□□□ -0.47
C9orf78-203ENST00000461539 RIC1Q4ADV7 1423 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 APBB1O00213 710 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 SRGNP10124 158 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 NPR1P16066 1061 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 CHRNA5P30532 468 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
C9orf78-203ENST00000461539 G3BP1Q13283 466 aaKnown RBP eCLIP12.12□□□□□ -0.47
C9orf78-203ENST00000461539 GRAPQ13588 217 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 GRAPLQ8TC17 118 aaPredicted RBP12.12□□□□□ -0.47
C9orf78-203ENST00000461539 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
C9orf78-203ENST00000461539 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 EXOC6BQ9Y2D4 811 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 RTL9Q8NET4 1388 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
C9orf78-203ENST00000461539 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
C9orf78-203ENST00000461539 HOXA10P31260 410 aaPredicted RBP12.11□□□□□ -0.47
C9orf78-203ENST00000461539 RPS8P62241 208 aaKnown RBP12.11□□□□□ -0.47
C9orf78-203ENST00000461539 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
C9orf78-203ENST00000461539 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
C9orf78-203ENST00000461539 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
C9orf78-203ENST00000461539 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
C9orf78-203ENST00000461539 CNNM1Q9NRU3 951 aa12.11□□□□□ -0.47
C9orf78-203ENST00000461539 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
C9orf78-203ENST00000461539 TUBGCP6Q96RT7 1819 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 EYA2O00167 538 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 DPEP1P16444 411 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 TGFB2P61812 414 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 LRRC24Q50LG9 513 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 STYK1Q6J9G0 422 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 CENPQQ7L2Z9 268 aaPredicted RBP12.1□□□□□ -0.47
C9orf78-203ENST00000461539 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 PUS3Q9BZE2 481 aaKnown RBP12.1□□□□□ -0.47
C9orf78-203ENST00000461539 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
C9orf78-203ENST00000461539 RAB11FIP3O75154 756 aa12.09□□□□□ -0.47
C9orf78-203ENST00000461539 CIAO1O76071 339 aa12.09□□□□□ -0.47
C9orf78-203ENST00000461539 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
C9orf78-203ENST00000461539 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
C9orf78-203ENST00000461539 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
C9orf78-203ENST00000461539 BSDC1Q9NW68 430 aaPredicted RBP12.09□□□□□ -0.47
C9orf78-203ENST00000461539 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
C9orf78-203ENST00000461539 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
C9orf78-203ENST00000461539 BBOX1O75936 387 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 IL15P40933 162 aaPredicted RBP12.08□□□□□ -0.48
C9orf78-203ENST00000461539 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 ANKRD45Q5TZF3 282 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 KDM2BQ8NHM5 1336 aa12.08□□□□□ -0.48
C9orf78-203ENST00000461539 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 NUP98P52948 1817 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 TTLL6Q8N841 843 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 RHPN1Q8TCX5 695 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 KIF1BPQ96EK5 621 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 LRRCC1Q9C099 1032 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
C9orf78-203ENST00000461539 TMX4Q9H1E5 349 aaPredicted RBP12.07□□□□□ -0.48
C9orf78-203ENST00000461539 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 RIPOR2Q9Y4F9 1068 aa12.07□□□□□ -0.48
C9orf78-203ENST00000461539 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
C9orf78-203ENST00000461539 CHRNDQ07001 517 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 TFCP2Q12800 502 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms