RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 IFFO2Q5TF58 517 aa11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 ETNK1Q9HBU6 452 aa11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 TRAK1Q9UPV9 953 aa11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
ECHDC1-212ENST00000461239 TOM1O60784 492 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 INHAP05111 366 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 MYT1Q01538 1121 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 FAM135BQ49AJ0 1406 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 DNAJC14Q6Y2X3 702 aaPredicted RBP11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 CAPN12Q6ZSI9 719 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 NALCNQ8IZF0 1738 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 ADGRL3Q9HAR2 1447 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 SEPT3Q9UH03 358 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 DLC1Q96QB1 1528 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 MSH6P52701 1360 aa11.39□□□□□ -0.59
ECHDC1-212ENST00000461239 TRPM1Q7Z4N2 1603 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 IGFBP4P22692 258 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 ADD1P35611 737 aaKnown RBP11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 SLC19A1P41440 591 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 ZNF211Q13398 564 aaPredicted RBP11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 CYP2U1Q7Z449 544 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 PRAM1Q96QH2 718 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 MKNK1Q9BUB5 465 aa11.38□□□□□ -0.59
ECHDC1-212ENST00000461239 BACH1O14867 736 aa11.37□□□□□ -0.59
ECHDC1-212ENST00000461239 ABL1P00519 1130 aa11.37□□□□□ -0.59
ECHDC1-212ENST00000461239 PIP4K2BP78356 416 aa11.37□□□□□ -0.59
ECHDC1-212ENST00000461239 NOM1Q5C9Z4 860 aaKnown RBP11.37□□□□□ -0.59
ECHDC1-212ENST00000461239 C21orf2O43822 256 aa11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 ICMTO60725 284 aa11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 RBM25P49756 843 aaKnown RBP11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 SAFB2Q14151 953 aaKnown RBP eCLIP11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 COL26A1Q96A83 441 aa11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
ECHDC1-212ENST00000461239 DCCP43146 1447 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 MST1RQ04912 1400 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 H3BRB1 525 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 FOXO3O43524 673 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 GNRH1P01148 92 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 GTF3C2Q8WUA4 911 aaPredicted RBP11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 TUT1Q9H6E5 874 aaKnown RBP11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 DNMT3AQ9Y6K1 912 aaPredicted RBP11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 ARHGEF28Q8N1W1 1705 aaKnown RBP11.35□□□□□ -0.59
ECHDC1-212ENST00000461239 PTCD1O75127 700 aaKnown RBP11.34□□□□□ -0.59
ECHDC1-212ENST00000461239 ECM1Q16610 540 aa11.34□□□□□ -0.59
ECHDC1-212ENST00000461239 SCG3Q8WXD2 468 aaKnown RBP11.34□□□□□ -0.59
ECHDC1-212ENST00000461239 TSPAN10Q9H1Z9 355 aaPredicted RBP11.34□□□□□ -0.59
ECHDC1-212ENST00000461239 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
ECHDC1-212ENST00000461239 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
ECHDC1-212ENST00000461239 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
ECHDC1-212ENST00000461239 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
ECHDC1-212ENST00000461239 ATF3P18847 181 aa11.33□□□□□ -0.6
ECHDC1-212ENST00000461239 FOXK2Q01167 660 aa11.33□□□□□ -0.6
ECHDC1-212ENST00000461239 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
ECHDC1-212ENST00000461239 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 HSPA1LP34931 641 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 ESCO1Q5FWF5 840 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 BRINP3Q76B58 766 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 POGKQ9P215 609 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 CDC42BPGQ6DT37 1551 aa11.32□□□□□ -0.6
ECHDC1-212ENST00000461239 ROBO1Q9Y6N7 1651 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 ERCC3P19447 782 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 NNTQ13423 1086 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 MTMR3Q13615 1198 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 MTFR1Q15390 333 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 GLYCTKQ8IVS8 523 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 RAB6BQ9NRW1 208 aa11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
ECHDC1-212ENST00000461239 ADGRB2O60241 1585 aa11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 A6NJY4 79 aa11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 IL2RAP01589 272 aa11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 ZNF697Q5TEC3 545 aa11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 KDF1Q8NAX2 398 aaPredicted RBP11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 CARD11Q9BXL7 1154 aa11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
ECHDC1-212ENST00000461239 A0A0G2JS52 829 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 HELQQ8TDG4 1101 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 HRH3Q9Y5N1 445 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 CENPJQ9HC77 1338 aaPredicted RBP11.29□□□□□ -0.6
ECHDC1-212ENST00000461239 ADH1AP07327 375 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms