RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 YDJCA8MPS7 323 aa20.34■□□□□ 0.85
YIPF3-206ENST00000460903 MKI67P46013 3256 aaKnown RBP20.34■□□□□ 0.85
YIPF3-206ENST00000460903 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.85
YIPF3-206ENST00000460903 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.85
YIPF3-206ENST00000460903 SUPT20HQ8NEM7 779 aa20.33■□□□□ 0.85
YIPF3-206ENST00000460903 ZBTB3Q9H5J0 574 aa20.33■□□□□ 0.85
YIPF3-206ENST00000460903 CTU1Q7Z7A3 348 aaKnown RBP20.32■□□□□ 0.84
YIPF3-206ENST00000460903 MICALL2Q8IY33 904 aa20.32■□□□□ 0.84
YIPF3-206ENST00000460903 GBA2Q9HCG7 927 aaPredicted RBP20.32■□□□□ 0.84
YIPF3-206ENST00000460903 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
YIPF3-206ENST00000460903 EGFRP00533 1210 aa20.31■□□□□ 0.84
YIPF3-206ENST00000460903 TNIP1Q15025 636 aa20.31■□□□□ 0.84
YIPF3-206ENST00000460903 SAMD7Q7Z3H4 446 aa20.31■□□□□ 0.84
YIPF3-206ENST00000460903 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
YIPF3-206ENST00000460903 CCDC102AQ96A19 550 aa20.31■□□□□ 0.84
YIPF3-206ENST00000460903 ZNF157P51786 506 aaPredicted RBP20.3■□□□□ 0.84
YIPF3-206ENST00000460903 DPP8Q6V1X1 898 aaPredicted RBP20.3■□□□□ 0.84
YIPF3-206ENST00000460903 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
YIPF3-206ENST00000460903 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
YIPF3-206ENST00000460903 CSRNP1Q96S65 589 aa20.3■□□□□ 0.84
YIPF3-206ENST00000460903 HPS5Q9UPZ3 1129 aa20.3■□□□□ 0.84
YIPF3-206ENST00000460903 ZBTB12Q9Y330 459 aaPredicted RBP20.3■□□□□ 0.84
YIPF3-206ENST00000460903 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
YIPF3-206ENST00000460903 RBBP6Q7Z6E9 1792 aaKnown RBP20.29■□□□□ 0.84
YIPF3-206ENST00000460903 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
YIPF3-206ENST00000460903 H7C1D1 291 aa20.29■□□□□ 0.84
YIPF3-206ENST00000460903 SLC10A3P09131 477 aa20.29■□□□□ 0.84
YIPF3-206ENST00000460903 KRT26Q7Z3Y9 468 aa20.29■□□□□ 0.84
YIPF3-206ENST00000460903 TMX4Q9H1E5 349 aaPredicted RBP20.29■□□□□ 0.84
YIPF3-206ENST00000460903 COL4A1P02462 1669 aa20.29■□□□□ 0.84
YIPF3-206ENST00000460903 MYL6BP14649 208 aa20.28■□□□□ 0.84
YIPF3-206ENST00000460903 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
YIPF3-206ENST00000460903 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
YIPF3-206ENST00000460903 GIGYF2Q6Y7W6 1299 aaKnown RBP20.28■□□□□ 0.84
YIPF3-206ENST00000460903 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
YIPF3-206ENST00000460903 MPNDQ8N594 471 aa20.28■□□□□ 0.84
YIPF3-206ENST00000460903 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
YIPF3-206ENST00000460903 PAPPA2Q9BXP8 1791 aa20.27■□□□□ 0.84
YIPF3-206ENST00000460903 TBC1D10BQ4KMP7 808 aaPredicted RBP20.27■□□□□ 0.84
YIPF3-206ENST00000460903 SLC10A5Q5PT55 438 aa20.27■□□□□ 0.84
YIPF3-206ENST00000460903 CENPFP49454 3210 aa20.27■□□□□ 0.84
YIPF3-206ENST00000460903 HTTP42858 3142 aa20.26■□□□□ 0.83
YIPF3-206ENST00000460903 PPP1R42Q7Z4L9 355 aa20.26■□□□□ 0.83
YIPF3-206ENST00000460903 PSMD14O00487 310 aa20.25■□□□□ 0.83
YIPF3-206ENST00000460903 DPF2Q92785 391 aa20.25■□□□□ 0.83
YIPF3-206ENST00000460903 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
YIPF3-206ENST00000460903 BBOX1O75936 387 aa20.24■□□□□ 0.83
YIPF3-206ENST00000460903 PARP10Q53GL7 1025 aa20.23■□□□□ 0.83
YIPF3-206ENST00000460903 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
YIPF3-206ENST00000460903 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
YIPF3-206ENST00000460903 RASAL3Q86YV0 1011 aa20.22■□□□□ 0.83
YIPF3-206ENST00000460903 DCPSQ96C86 337 aaKnown RBP20.22■□□□□ 0.83
YIPF3-206ENST00000460903 UTP14AQ9BVJ6 771 aaKnown RBP20.22■□□□□ 0.83
YIPF3-206ENST00000460903 ZNF646O15015 1829 aaPredicted RBP20.22■□□□□ 0.83
YIPF3-206ENST00000460903 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
YIPF3-206ENST00000460903 LRP10Q7Z4F1 713 aa20.21■□□□□ 0.83
YIPF3-206ENST00000460903 DBNDD1Q9H9R9 158 aa20.21■□□□□ 0.83
YIPF3-206ENST00000460903 ASTN2O75129 1339 aaPredicted RBP20.21■□□□□ 0.83
YIPF3-206ENST00000460903 BRCA2P51587 3418 aa20.21■□□□□ 0.83
YIPF3-206ENST00000460903 LAMB1P07942 1786 aa20.21■□□□□ 0.83
YIPF3-206ENST00000460903 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
YIPF3-206ENST00000460903 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-206ENST00000460903 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-206ENST00000460903 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
YIPF3-206ENST00000460903 GRAPQ13588 217 aa20.2■□□□□ 0.82
YIPF3-206ENST00000460903 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
YIPF3-206ENST00000460903 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
YIPF3-206ENST00000460903 KCNQ5Q9NR82 932 aa20.2■□□□□ 0.82
YIPF3-206ENST00000460903 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
YIPF3-206ENST00000460903 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
YIPF3-206ENST00000460903 CDCA5Q96FF9 252 aa20.19■□□□□ 0.82
YIPF3-206ENST00000460903 THUMPD2Q9BTF0 503 aaKnown RBP20.19■□□□□ 0.82
YIPF3-206ENST00000460903 GGA3Q9NZ52 723 aa20.19■□□□□ 0.82
YIPF3-206ENST00000460903 HABP4Q5JVS0 413 aaKnown RBP20.18■□□□□ 0.82
YIPF3-206ENST00000460903 CFAP53Q96M91 514 aa20.18■□□□□ 0.82
YIPF3-206ENST00000460903 TBC1D8O95759 1140 aa20.17■□□□□ 0.82
YIPF3-206ENST00000460903 WASHC4Q2M389 1173 aa20.17■□□□□ 0.82
YIPF3-206ENST00000460903 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
YIPF3-206ENST00000460903 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
YIPF3-206ENST00000460903 REM2Q8IYK8 340 aaPredicted RBP20.17■□□□□ 0.82
YIPF3-206ENST00000460903 HDAC9Q9UKV0 1011 aa20.17■□□□□ 0.82
YIPF3-206ENST00000460903 NUDCQ9Y266 331 aa20.17■□□□□ 0.82
YIPF3-206ENST00000460903 ERBB4Q15303 1308 aa20.17■□□□□ 0.82
YIPF3-206ENST00000460903 KIAA0100Q14667 2235 aaKnown RBP20.17■□□□□ 0.82
YIPF3-206ENST00000460903 RIMBP2O15034 1052 aa20.16■□□□□ 0.82
YIPF3-206ENST00000460903 RPS12P25398 132 aaKnown RBP20.16■□□□□ 0.82
YIPF3-206ENST00000460903 SULF1Q8IWU6 871 aa20.16■□□□□ 0.82
YIPF3-206ENST00000460903 PDIA6Q15084 440 aa20.15■□□□□ 0.82
YIPF3-206ENST00000460903 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
YIPF3-206ENST00000460903 ECE2O60344 883 aa20.14■□□□□ 0.81
YIPF3-206ENST00000460903 ANXA1P04083 346 aa20.14■□□□□ 0.81
YIPF3-206ENST00000460903 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
YIPF3-206ENST00000460903 FBXO46Q6PJ61 603 aaPredicted RBP20.14■□□□□ 0.81
YIPF3-206ENST00000460903 NLRP10Q86W26 655 aa20.14■□□□□ 0.81
YIPF3-206ENST00000460903 POLLQ9UGP5 575 aa20.14■□□□□ 0.81
YIPF3-206ENST00000460903 DOK7Q18PE1 504 aa20.13■□□□□ 0.81
YIPF3-206ENST00000460903 MOB2Q70IA6 237 aa20.13■□□□□ 0.81
YIPF3-206ENST00000460903 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
YIPF3-206ENST00000460903 NSFL1CQ9UNZ2 370 aaKnown RBP20.13■□□□□ 0.81
YIPF3-206ENST00000460903 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms