RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 IGFLR1Q9H665 355 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 EFCC1Q9HA90 598 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 HCN2Q9UL51 889 aa4.81□□□□□ -1.64
HPS3-203ENST00000460822 SOWAHDA6NJG2 315 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 C11orf91Q3C1V1 193 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 LINC00114Q6XXX2 140 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 DNAJC14Q6Y2X3 702 aaPredicted RBP4.8□□□□□ -1.64
HPS3-203ENST00000460822 PRIMPOLQ96LW4 560 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 UBE2OQ9C0C9 1292 aaKnown RBP4.8□□□□□ -1.64
HPS3-203ENST00000460822 KLK14Q9P0G3 267 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 RBM47A0AV96 593 aaKnown RBP4.8□□□□□ -1.64
HPS3-203ENST00000460822 ADARB2-AS1A8MUL3 147 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 C1QTNF9BB2RNN3 333 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 PRMT3O60678 531 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 ADH7P40394 386 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 DGKGP49619 791 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 CCINQ13939 588 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 TNFRSF25Q93038 417 aa4.8□□□□□ -1.64
HPS3-203ENST00000460822 IDH3AP50213 366 aa4.79□□□□□ -1.64
HPS3-203ENST00000460822 ARSDP51689 593 aa4.79□□□□□ -1.64
HPS3-203ENST00000460822 BIN2Q9UBW5 565 aaPredicted RBP4.79□□□□□ -1.64
HPS3-203ENST00000460822 LOC105371045A0A1W2PR82 267 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 NOM1Q5C9Z4 860 aaKnown RBP4.78□□□□□ -1.64
HPS3-203ENST00000460822 PRRT3Q5FWE3 981 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 IFT43Q96FT9 208 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 MYO19Q96H55 970 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 SEMA6BQ9H3T3 888 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 SUV39H2Q9H5I1 410 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.78□□□□□ -1.64
HPS3-203ENST00000460822 MICAL2O94851 1124 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 HOXB4P17483 251 aaPredicted RBP4.78□□□□□ -1.64
HPS3-203ENST00000460822 ERCC3P19447 782 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 PCSK7Q16549 785 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 ZMYM1Q5SVZ6 1142 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 CD163Q86VB7 1156 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 PLVAPQ9BX97 442 aa4.78□□□□□ -1.64
HPS3-203ENST00000460822 QTRT2Q9H974 415 aaKnown RBP4.78□□□□□ -1.64
HPS3-203ENST00000460822 M0R082 166 aa4.77□□□□□ -1.65
HPS3-203ENST00000460822 NFKB1P19838 968 aa4.77□□□□□ -1.65
HPS3-203ENST00000460822 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
HPS3-203ENST00000460822 ZNF417Q8TAU3 575 aa4.77□□□□□ -1.65
HPS3-203ENST00000460822 MRRFQ96E11 262 aaKnown RBP4.77□□□□□ -1.65
HPS3-203ENST00000460822 ZNF587Q96SQ5 575 aaPredicted RBP4.77□□□□□ -1.65
HPS3-203ENST00000460822 GSX2Q9BZM3 304 aa4.77□□□□□ -1.65
HPS3-203ENST00000460822 ABL1P00519 1130 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 FKBP5Q13451 457 aaPredicted RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 OCLNQ16625 522 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 KRT25Q7Z3Z0 450 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 BCL2L13Q9BXK5 485 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 KIAA1522Q9P206 1035 aaPredicted RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 DMGDHQ9UI17 866 aaKnown RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 BCS1LQ9Y276 419 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 LILRB5O75023 590 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 PTCD1O75127 700 aaKnown RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 APBA3O96018 575 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 ZNF16P17020 682 aaPredicted RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 BRD2P25440 801 aaKnown RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 INPP5BP32019 993 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 TRIM28Q13263 835 aaKnown RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 ZNF211Q13398 564 aaPredicted RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 C16orf46Q6P387 395 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 CMTR1Q8N1G2 835 aaKnown RBP4.76□□□□□ -1.65
HPS3-203ENST00000460822 MICALL1Q8N3F8 863 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 MKNK1Q9BUB5 465 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 C11orf16Q9NQ32 467 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 FAM13BQ9NYF5 915 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 SLC6A14Q9UN76 642 aa4.76□□□□□ -1.65
HPS3-203ENST00000460822 H3BRB1 525 aa4.75□□□□□ -1.65
HPS3-203ENST00000460822 SPATA31C1P0DKV0 1188 aa4.75□□□□□ -1.65
HPS3-203ENST00000460822 RARAP10276 462 aa4.75□□□□□ -1.65
HPS3-203ENST00000460822 TRAPPC3LQ5T215 181 aa4.75□□□□□ -1.65
HPS3-203ENST00000460822 TREML1Q86YW5 311 aa4.75□□□□□ -1.65
HPS3-203ENST00000460822 GIPC2Q8TF65 315 aa4.75□□□□□ -1.65
HPS3-203ENST00000460822 TUT1Q9H6E5 874 aaKnown RBP4.75□□□□□ -1.65
HPS3-203ENST00000460822 DNAJB12Q9NXW2 375 aaKnown RBP4.75□□□□□ -1.65
HPS3-203ENST00000460822 CXXC1Q9P0U4 656 aaPredicted RBP4.75□□□□□ -1.65
HPS3-203ENST00000460822 ANKRD33BA6NCL7 494 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 ALBP02768 609 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 COX20Q5RI15 118 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 COL26A1Q96A83 441 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 TRIM11Q96F44 468 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 MDFIQ99750 246 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 JPH1Q9HDC5 661 aaPredicted RBP4.74□□□□□ -1.65
HPS3-203ENST00000460822 ANO2Q9NQ90 1003 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 IGSF5Q9NSI5 407 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 LRFN2Q9ULH4 789 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 RTCBQ9Y3I0 505 aaKnown RBP4.74□□□□□ -1.65
HPS3-203ENST00000460822 RGS9O75916 674 aaPredicted RBP4.74□□□□□ -1.65
HPS3-203ENST00000460822 SASH3O75995 380 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 DOC2BQ14184 412 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 NAA30Q147X3 362 aaPredicted RBP4.74□□□□□ -1.65
HPS3-203ENST00000460822 NPAS4Q8IUM7 802 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 RGL4Q8IZJ4 473 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 NUDT8Q8WV74 236 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 NACC1Q96RE7 527 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 PRDM6Q9NQX0 595 aa4.74□□□□□ -1.65
HPS3-203ENST00000460822 STARD13Q9Y3M8 1113 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms