RNA–Protein interactions for RNA: ENST00000460712.1

NUB1-202, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-202ENST00000460712 C3orf67Q6ZVT6 689 aa15.39■□□□□ 0.05
NUB1-202ENST00000460712 TMC4Q7Z404 712 aa15.39■□□□□ 0.05
NUB1-202ENST00000460712 CACNA1SQ13698 1873 aa15.38■□□□□ 0.05
NUB1-202ENST00000460712 YBX3P16989 372 aaKnown RBP eCLIP15.38■□□□□ 0.05
NUB1-202ENST00000460712 GRAPQ13588 217 aa15.38■□□□□ 0.05
NUB1-202ENST00000460712 GRIPAP1Q4V328 841 aa15.38■□□□□ 0.05
NUB1-202ENST00000460712 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
NUB1-202ENST00000460712 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
NUB1-202ENST00000460712 GRAPLQ8TC17 118 aaPredicted RBP15.38■□□□□ 0.05
NUB1-202ENST00000460712 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
NUB1-202ENST00000460712 BBOX1O75936 387 aa15.37■□□□□ 0.05
NUB1-202ENST00000460712 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
NUB1-202ENST00000460712 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
NUB1-202ENST00000460712 PPEF1O14829 653 aaPredicted RBP15.36■□□□□ 0.05
NUB1-202ENST00000460712 GNAI3P08754 354 aa15.36■□□□□ 0.05
NUB1-202ENST00000460712 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
NUB1-202ENST00000460712 TTLL11Q8NHH1 800 aa15.36■□□□□ 0.05
NUB1-202ENST00000460712 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
NUB1-202ENST00000460712 CDC5LQ99459 802 aaKnown RBP15.36■□□□□ 0.05
NUB1-202ENST00000460712 USP44Q9H0E7 712 aa15.36■□□□□ 0.05
NUB1-202ENST00000460712 WWC3Q9ULE0 1092 aa15.36■□□□□ 0.05
NUB1-202ENST00000460712 CSF1RP07333 972 aa15.35■□□□□ 0.05
NUB1-202ENST00000460712 UBTFL1P0CB47 393 aaPredicted RBP15.35■□□□□ 0.05
NUB1-202ENST00000460712 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
NUB1-202ENST00000460712 C21orf2O43822 256 aa15.34■□□□□ 0.05
NUB1-202ENST00000460712 FOXO4P98177 505 aa15.34■□□□□ 0.05
NUB1-202ENST00000460712 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
NUB1-202ENST00000460712 TMEM57Q8N5G2 664 aa15.34■□□□□ 0.05
NUB1-202ENST00000460712 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
NUB1-202ENST00000460712 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
NUB1-202ENST00000460712 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
NUB1-202ENST00000460712 RABL6Q3YEC7 729 aaPredicted RBP15.33■□□□□ 0.04
NUB1-202ENST00000460712 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
NUB1-202ENST00000460712 SP8Q8IXZ3 490 aa15.33■□□□□ 0.04
NUB1-202ENST00000460712 SUCLG2Q96I99 432 aa15.33■□□□□ 0.04
NUB1-202ENST00000460712 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
NUB1-202ENST00000460712 GREM2Q9H772 168 aa15.33■□□□□ 0.04
NUB1-202ENST00000460712 ATP6V0A2Q9Y487 856 aa15.33■□□□□ 0.04
NUB1-202ENST00000460712 LRRC37AA6NMS7 1700 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 ITGA6P23229 1130 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 IFIT5Q13325 482 aaKnown RBP15.32■□□□□ 0.04
NUB1-202ENST00000460712 LMBR1LQ6UX01 489 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 ARHGAP27Q6ZUM4 889 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 TNNQ9UQP3 1299 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 LTBP3Q9NS15 1303 aa15.32■□□□□ 0.04
NUB1-202ENST00000460712 IGHMBP2P38935 993 aaKnown RBP15.31■□□□□ 0.04
NUB1-202ENST00000460712 CCDC57Q2TAC2 916 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 FAM161AQ3B820 660 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
NUB1-202ENST00000460712 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 CCDC85AQ96PX6 553 aaPredicted RBP15.31■□□□□ 0.04
NUB1-202ENST00000460712 MEIS3Q99687 375 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 TAOK3Q9H2K8 898 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 BICC1Q9H694 974 aaKnown RBP15.31■□□□□ 0.04
NUB1-202ENST00000460712 SEC31BQ9NQW1 1179 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 CHMP3Q9Y3E7 222 aa15.31■□□□□ 0.04
NUB1-202ENST00000460712 RLBP1P12271 317 aa15.3■□□□□ 0.04
NUB1-202ENST00000460712 MVPQ14764 893 aaKnown RBP15.3■□□□□ 0.04
NUB1-202ENST00000460712 CHD4Q14839 1912 aa15.3■□□□□ 0.04
NUB1-202ENST00000460712 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
NUB1-202ENST00000460712 PSMD1Q99460 953 aa15.3■□□□□ 0.04
NUB1-202ENST00000460712 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
NUB1-202ENST00000460712 DDX19BQ9UMR2 479 aa15.3■□□□□ 0.04
NUB1-202ENST00000460712 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 GNAI2P04899 355 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
NUB1-202ENST00000460712 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
NUB1-202ENST00000460712 TAF7LQ5H9L4 462 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 SUPT20HQ8NEM7 779 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 MPHOSPH8Q99549 860 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
NUB1-202ENST00000460712 LRRFIP2Q9Y608 721 aaKnown RBP15.29■□□□□ 0.04
NUB1-202ENST00000460712 TAF1P21675 1872 aa15.29■□□□□ 0.04
NUB1-202ENST00000460712 NFKBIEO00221 500 aa15.28■□□□□ 0.04
NUB1-202ENST00000460712 PLIN1O60240 522 aa15.28■□□□□ 0.04
NUB1-202ENST00000460712 ZBTB7BO15156 539 aaPredicted RBP15.27■□□□□ 0.04
NUB1-202ENST00000460712 LMNB1P20700 586 aa15.27■□□□□ 0.04
NUB1-202ENST00000460712 DPP8Q6V1X1 898 aaPredicted RBP15.27■□□□□ 0.04
NUB1-202ENST00000460712 MPNDQ8N594 471 aa15.27■□□□□ 0.04
NUB1-202ENST00000460712 VPS33BQ9H267 617 aa15.27■□□□□ 0.04
NUB1-202ENST00000460712 SPEF2Q9C093 1822 aa15.27■□□□□ 0.03
NUB1-202ENST00000460712 COL4A1P02462 1669 aa15.26■□□□□ 0.03
NUB1-202ENST00000460712 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
NUB1-202ENST00000460712 MTX1Q13505 466 aa15.26■□□□□ 0.03
NUB1-202ENST00000460712 RTFDC1Q9BY42 306 aaPredicted RBP15.26■□□□□ 0.03
NUB1-202ENST00000460712 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
NUB1-202ENST00000460712 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
NUB1-202ENST00000460712 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
NUB1-202ENST00000460712 SBF1O95248 1867 aa15.25■□□□□ 0.03
NUB1-202ENST00000460712 XDHP47989 1333 aa15.25■□□□□ 0.03
NUB1-202ENST00000460712 RASSF7Q02833 373 aa15.25■□□□□ 0.03
NUB1-202ENST00000460712 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
NUB1-202ENST00000460712 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
NUB1-202ENST00000460712 COG6Q9Y2V7 657 aa15.25■□□□□ 0.03
NUB1-202ENST00000460712 LTBP1Q14766 1721 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms