RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 KLRG2A4D1S0 409 aaPredicted RBP15.36■□□□□ 0.05
HDAC4-206ENST00000460235 NPR1P16066 1061 aa15.36■□□□□ 0.05
HDAC4-206ENST00000460235 TTLL11Q8NHH1 800 aa15.36■□□□□ 0.05
HDAC4-206ENST00000460235 BICC1Q9H694 974 aaKnown RBP15.36■□□□□ 0.05
HDAC4-206ENST00000460235 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
HDAC4-206ENST00000460235 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
HDAC4-206ENST00000460235 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
HDAC4-206ENST00000460235 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-206ENST00000460235 FOXO4P98177 505 aa15.35■□□□□ 0.05
HDAC4-206ENST00000460235 ANKRD44Q8N8A2 993 aa15.35■□□□□ 0.05
HDAC4-206ENST00000460235 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-206ENST00000460235 CNKSR1Q969H4 720 aa15.35■□□□□ 0.05
HDAC4-206ENST00000460235 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
HDAC4-206ENST00000460235 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
HDAC4-206ENST00000460235 BBOX1O75936 387 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 PTGER2P43116 358 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 STYK1Q6J9G0 422 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 C2CD5Q86YS7 1000 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 CRAMP1Q96RY5 1269 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 MPHOSPH8Q99549 860 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
HDAC4-206ENST00000460235 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-206ENST00000460235 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
HDAC4-206ENST00000460235 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
HDAC4-206ENST00000460235 ANKRD18AQ8IVF6 992 aa15.33■□□□□ 0.04
HDAC4-206ENST00000460235 SYNE4Q8N205 404 aa15.33■□□□□ 0.04
HDAC4-206ENST00000460235 NRXN2Q9P2S2 1712 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 SRGNP10124 158 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 ITGA6P23229 1130 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 G3BP1Q13283 466 aaKnown RBP eCLIP15.32■□□□□ 0.04
HDAC4-206ENST00000460235 ERC1Q8IUD2 1116 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 ABCC12Q96J65 1359 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
HDAC4-206ENST00000460235 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
HDAC4-206ENST00000460235 HDAC1Q13547 482 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-206ENST00000460235 GRAPQ13588 217 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-206ENST00000460235 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
HDAC4-206ENST00000460235 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
HDAC4-206ENST00000460235 RAB11FIP3O75154 756 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 OS9Q13438 667 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-206ENST00000460235 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 GCC1Q96CN9 775 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 GREM2Q9H772 168 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 COPRSQ9NQ92 184 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 CNNM1Q9NRU3 951 aa15.3■□□□□ 0.04
HDAC4-206ENST00000460235 CIAO1O76071 339 aa15.29■□□□□ 0.04
HDAC4-206ENST00000460235 POLA2Q14181 598 aa15.29■□□□□ 0.04
HDAC4-206ENST00000460235 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
HDAC4-206ENST00000460235 TTLL6Q8N841 843 aa15.29■□□□□ 0.04
HDAC4-206ENST00000460235 BSDC1Q9NW68 430 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-206ENST00000460235 LAMB2P55268 1798 aa15.29■□□□□ 0.04
HDAC4-206ENST00000460235 SURF6O75683 361 aaKnown RBP15.28■□□□□ 0.04
HDAC4-206ENST00000460235 IL15P40933 162 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-206ENST00000460235 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-206ENST00000460235 ANKRD2Q9GZV1 360 aa15.28■□□□□ 0.04
HDAC4-206ENST00000460235 MYH3P11055 1940 aa15.27■□□□□ 0.04
HDAC4-206ENST00000460235 MROH5Q6ZUA9 1318 aa15.27■□□□□ 0.04
HDAC4-206ENST00000460235 EYA2O00167 538 aa15.27■□□□□ 0.04
HDAC4-206ENST00000460235 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
HDAC4-206ENST00000460235 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.04
HDAC4-206ENST00000460235 PNMA6EA0A0J9YXQ4 647 aa15.26■□□□□ 0.03
HDAC4-206ENST00000460235 DPEP1P16444 411 aa15.26■□□□□ 0.03
HDAC4-206ENST00000460235 DALRD3Q5D0E6 543 aaKnown RBP15.26■□□□□ 0.03
HDAC4-206ENST00000460235 SP8Q8IXZ3 490 aa15.26■□□□□ 0.03
HDAC4-206ENST00000460235 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
HDAC4-206ENST00000460235 AKAP2Q9Y2D5 859 aa15.26■□□□□ 0.03
HDAC4-206ENST00000460235 A0A0G2JLW4 131 aa15.25■□□□□ 0.03
HDAC4-206ENST00000460235 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-206ENST00000460235 PTPN12Q05209 780 aaKnown RBP15.25■□□□□ 0.03
HDAC4-206ENST00000460235 KIF1BPQ96EK5 621 aa15.25■□□□□ 0.03
HDAC4-206ENST00000460235 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-206ENST00000460235 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
HDAC4-206ENST00000460235 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
HDAC4-206ENST00000460235 DDX60Q8IY21 1712 aaKnown RBP15.25■□□□□ 0.03
HDAC4-206ENST00000460235 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
HDAC4-206ENST00000460235 CHRNA5P30532 468 aa15.24■□□□□ 0.03
HDAC4-206ENST00000460235 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-206ENST00000460235 C3orf67Q6ZVT6 689 aa15.24■□□□□ 0.03
HDAC4-206ENST00000460235 CENPQQ7L2Z9 268 aaPredicted RBP15.24■□□□□ 0.03
HDAC4-206ENST00000460235 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
HDAC4-206ENST00000460235 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
HDAC4-206ENST00000460235 KCNJ4P48050 445 aa15.23■□□□□ 0.03
HDAC4-206ENST00000460235 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
HDAC4-206ENST00000460235 PRPF40BQ6NWY9 871 aaKnown RBP15.23■□□□□ 0.03
HDAC4-206ENST00000460235 SIRT2Q8IXJ6 389 aa15.23■□□□□ 0.03
HDAC4-206ENST00000460235 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
HDAC4-206ENST00000460235 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
HDAC4-206ENST00000460235 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms