RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 BRIP1Q9BX63 1249 aa12.9□□□□□ -0.34
GARNL3-211ENST00000460176 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
GARNL3-211ENST00000460176 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
GARNL3-211ENST00000460176 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
GARNL3-211ENST00000460176 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
GARNL3-211ENST00000460176 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
GARNL3-211ENST00000460176 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
GARNL3-211ENST00000460176 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
GARNL3-211ENST00000460176 COL4A1P02462 1669 aa12.89□□□□□ -0.35
GARNL3-211ENST00000460176 KLRG2A4D1S0 409 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-211ENST00000460176 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 PDE8AO60658 829 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 GNAI3P08754 354 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 FOXO4P98177 505 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-211ENST00000460176 TAF1P21675 1872 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
GARNL3-211ENST00000460176 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
GARNL3-211ENST00000460176 CTSWP56202 376 aa12.87□□□□□ -0.35
GARNL3-211ENST00000460176 CRY2Q49AN0 593 aa12.87□□□□□ -0.35
GARNL3-211ENST00000460176 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
GARNL3-211ENST00000460176 ZBTB40Q9NUA8 1239 aa12.87□□□□□ -0.35
GARNL3-211ENST00000460176 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
GARNL3-211ENST00000460176 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
GARNL3-211ENST00000460176 PDE6BP35913 854 aa12.86□□□□□ -0.35
GARNL3-211ENST00000460176 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-211ENST00000460176 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
GARNL3-211ENST00000460176 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-211ENST00000460176 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
GARNL3-211ENST00000460176 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
GARNL3-211ENST00000460176 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 GNAI2P04899 355 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 CSF1RP07333 972 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 CHRNA5P30532 468 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 FHDC1Q9C0D6 1143 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-211ENST00000460176 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
GARNL3-211ENST00000460176 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
GARNL3-211ENST00000460176 SRGNP10124 158 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 TGFB2P61812 414 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
GARNL3-211ENST00000460176 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-211ENST00000460176 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
GARNL3-211ENST00000460176 H0YIN7 160 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 DPEP1P16444 411 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 KCNA3P22001 575 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-211ENST00000460176 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 CCDC152Q4G0S7 254 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-211ENST00000460176 GREM2Q9H772 168 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 SLX4Q8IY92 1834 aa12.83□□□□□ -0.36
GARNL3-211ENST00000460176 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
GARNL3-211ENST00000460176 NPR1P16066 1061 aa12.82□□□□□ -0.36
GARNL3-211ENST00000460176 MTX1Q13505 466 aa12.82□□□□□ -0.36
GARNL3-211ENST00000460176 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
GARNL3-211ENST00000460176 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
GARNL3-211ENST00000460176 MASTLQ96GX5 879 aa12.82□□□□□ -0.36
GARNL3-211ENST00000460176 ARFGEF1Q9Y6D6 1849 aa12.82□□□□□ -0.36
GARNL3-211ENST00000460176 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
GARNL3-211ENST00000460176 CEP85Q6P2H3 762 aa12.81□□□□□ -0.36
GARNL3-211ENST00000460176 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
GARNL3-211ENST00000460176 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
GARNL3-211ENST00000460176 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
GARNL3-211ENST00000460176 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
GARNL3-211ENST00000460176 SEC31BQ9NQW1 1179 aa12.81□□□□□ -0.36
GARNL3-211ENST00000460176 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
GARNL3-211ENST00000460176 ITGA6P23229 1130 aa12.8□□□□□ -0.36
GARNL3-211ENST00000460176 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-211ENST00000460176 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
GARNL3-211ENST00000460176 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
GARNL3-211ENST00000460176 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 GRAPQ13588 217 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 AAMPQ13685 434 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 GRAPLQ8TC17 118 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-211ENST00000460176 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
GARNL3-211ENST00000460176 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
GARNL3-211ENST00000460176 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 LTBP1Q14766 1721 aa12.79□□□□□ -0.36
GARNL3-211ENST00000460176 SRGAP3O43295 1099 aa12.78□□□□□ -0.36
GARNL3-211ENST00000460176 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
GARNL3-211ENST00000460176 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
GARNL3-211ENST00000460176 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
GARNL3-211ENST00000460176 PRPF40BQ6NWY9 871 aaKnown RBP12.78□□□□□ -0.36
GARNL3-211ENST00000460176 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-211ENST00000460176 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
GARNL3-211ENST00000460176 SSH3Q8TE77 659 aa12.78□□□□□ -0.36
GARNL3-211ENST00000460176 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms