RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	GLRX3	O76003	335 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	RASA3	Q14644	834 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	TBC1D31	Q96DN5	1066 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	IFIT3	O14879	490 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	NBPF8	Q3BBV2	869 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850		B4DLN1	442 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	MRPL12	P52815	198 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	PDE4B	Q07343	736 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	SRRT	Q9BXP5	876 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	EXOC1	Q9NV70	894 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	TSPY2	A6NKD2	308 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	TAF7	Q15545	349 aa	Predicted RBP	13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	KIAA1524	Q8TCG1	905 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	EXOC6B	Q9Y2D4	811 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	FAM169A	Q9Y6X4	670 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	HSF2BP	O75031	334 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	BACH2	Q9BYV9	841 aa		13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	CDK13	Q14004	1512 aa	Known RBP	13.78	□□□□□ -0.2
ABCA2-208	ENST00000459850	KRT13	P13646	458 aa		13.77	□□□□□ -0.2
ABCA2-208	ENST00000459850	LMOD1	P29536	600 aa	Predicted RBP	13.77	□□□□□ -0.2
ABCA2-208	ENST00000459850	RASAL2	Q9UJF2	1139 aa		13.77	□□□□□ -0.2
ABCA2-208	ENST00000459850	HDAC9	Q9UKV0	1011 aa		13.77	□□□□□ -0.2
ABCA2-208	ENST00000459850	RNF41	Q9H4P4	317 aa	Predicted RBP	13.77	□□□□□ -0.2
ABCA2-208	ENST00000459850	CCDC61	Q9Y6R9	512 aa		13.77	□□□□□ -0.2
ABCA2-208	ENST00000459850	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	BICRA	Q9NZM4	1560 aa		13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	PRPF40B	Q6NWY9	871 aa	Known RBP	13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	HMGB1	P09429	215 aa	Known RBP	13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	CGN	Q9P2M7	1197 aa	Known RBP	13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	WWC3	Q9ULE0	1092 aa		13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	KIF18A	Q8NI77	898 aa		13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	BOLA2	Q9H3K6	86 aa		13.77	□□□□□ -0.21
ABCA2-208	ENST00000459850	WDR97	A6NE52	1622 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	AKNAD1	Q5T1N1	836 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	TRMT112	Q9UI30	125 aa	Known RBP	13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	RNF34	Q969K3	372 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	SARNP	P82979	210 aa	Known RBP	13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	GOLGA6L9	A6NEM1	432 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	SMARCA5	O60264	1052 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	CLIP2	Q9UDT6	1046 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	SLFN5	Q08AF3	891 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	SELENOO	Q9BVL4	669 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	KIF21A	Q7Z4S6	1674 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	PLEKHH1	Q9ULM0	1364 aa		13.76	□□□□□ -0.21
ABCA2-208	ENST00000459850	KIF3C	O14782	793 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	TTF1	Q15361	905 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	ALDH1L2	Q3SY69	923 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	USHBP1	Q8N6Y0	703 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	NSRP1	Q9H0G5	558 aa	Known RBP	13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	ANO10	Q9NW15	660 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	ERMN	Q8TAM6	284 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	ANKFY1	Q9P2R3	1169 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	PLCB3	Q01970	1234 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	CAMSAP2	Q08AD1	1489 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	CALM1	P0DP23	149 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	CALM2	P0DP24	149 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	CALM3	P0DP25	149 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	HYPK	Q9NX55	129 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.75	□□□□□ -0.21	2e-12	■■■■□ 26.6
ABCA2-208	ENST00000459850	ATP2A1	O14983	1001 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	ATP6V1E1	P36543	226 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	PPP2R5C	Q13362	524 aa		13.75	□□□□□ -0.21
ABCA2-208	ENST00000459850	MAP3K1	Q13233	1512 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	ABCA10	Q8WWZ4	1543 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	ARHGEF11	O15085	1522 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	FAM13A	O94988	1023 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	WAPL	Q7Z5K2	1190 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850		F8W031	263 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	GIPC1	O14908	333 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	TRIM7	Q9C029	511 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	NOP9	Q86U38	636 aa	Known RBP	13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	IL27	Q8NEV9	243 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	NKTR	P30414	1462 aa	Known RBP	13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	ANKS4B	Q8N8V4	417 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	MSANTD4	Q8NCY6	345 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	SMARCC1	Q92922	1105 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	LRPPRC	P42704	1394 aa	Known RBP	13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	FAM184B	Q9ULE4	1060 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	OPA1	O60313	960 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	TACC3	Q9Y6A5	838 aa		13.74	□□□□□ -0.21
ABCA2-208	ENST00000459850	TSPY3	P0CV98	308 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	TSPY8	P0CW00	308 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	RBM26	Q5T8P6	1007 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	VEZT	Q9HBM0	779 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	UBA7	P41226	1012 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	SEPT14	Q6ZU15	432 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	ZFP91	Q96JP5	570 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	PPAN	Q9NQ55	473 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	7e-7	■■■□□ 17.1
ABCA2-208	ENST00000459850	PDCL2	Q8N4E4	241 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	CCDC114	Q96M63	670 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	BRPF3	Q9ULD4	1205 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	KIFC2	Q96AC6	838 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	SYCE3	A1L190	88 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	VPS52	Q8N1B4	723 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	LRRC27	Q9C0I9	530 aa		13.73	□□□□□ -0.21
ABCA2-208	ENST00000459850	ERCC3	P19447	782 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms