RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 BRF1Q92994 677 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 ST7Q9NRC1 585 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 TTC41PQ6P2S7 1318 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 CHGBP05060 677 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 PSMA5P28066 241 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 ELF2Q15723 593 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 EVI5LQ96CN4 794 aa13.65□□□□□ -0.22
UBE2L3-202ENST00000458578 PLEKHG1Q9ULL1 1385 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 RGPD8O14715 1765 aaPredicted RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 EIF4A1P60842 406 aaKnown RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 PROSER3Q2NL68 480 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 GUCY1B3Q02153 619 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 TOB2Q14106 344 aaPredicted RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 KMT5BQ4FZB7 885 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 LRRC8AQ8IWT6 810 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
UBE2L3-202ENST00000458578 MAP4K1Q92918 833 aa13.63□□□□□ -0.23
UBE2L3-202ENST00000458578 ELP1O95163 1332 aa13.63□□□□□ -0.23
UBE2L3-202ENST00000458578 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
UBE2L3-202ENST00000458578 RNF20Q5VTR2 975 aa13.63□□□□□ -0.23
UBE2L3-202ENST00000458578 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
UBE2L3-202ENST00000458578 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
UBE2L3-202ENST00000458578 RPS6KB1P23443 525 aa13.62□□□□□ -0.23
UBE2L3-202ENST00000458578 G3BP1Q13283 466 aaKnown RBP eCLIP13.62□□□□□ -0.23
UBE2L3-202ENST00000458578 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
UBE2L3-202ENST00000458578 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
UBE2L3-202ENST00000458578 PSME1Q06323 249 aa13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 FBXO38Q6PIJ6 1188 aa13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 TBX22Q9Y458 520 aa13.61□□□□□ -0.23
UBE2L3-202ENST00000458578 XRN1Q8IZH2 1706 aaKnown RBP13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 SLFN14P0C7P3 912 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 ANKRD1Q15327 319 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 KRT222Q8N1A0 295 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 AOPEPQ8N6M6 819 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 SASH1O94885 1247 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 CCT2P78371 535 aaKnown RBP13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 Q6ZUG5 572 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 SEC62Q99442 399 aaKnown RBP13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 PHF8Q9UPP1 1060 aa13.6□□□□□ -0.23
UBE2L3-202ENST00000458578 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 ME1P48163 572 aa13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 IQCB1Q15051 598 aa13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 ZNF397Q8NF99 534 aaPredicted RBP13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 BICC1Q9H694 974 aaKnown RBP13.59□□□□□ -0.23
UBE2L3-202ENST00000458578 VGLL3A8MV65 326 aa13.58□□□□□ -0.23
UBE2L3-202ENST00000458578 KINO60870 393 aaKnown RBP13.58□□□□□ -0.23
UBE2L3-202ENST00000458578 CCDC73Q6ZRK6 1079 aa13.58□□□□□ -0.23
UBE2L3-202ENST00000458578 SUCLG2Q96I99 432 aa13.58□□□□□ -0.23
UBE2L3-202ENST00000458578 BIN1O00499 593 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 SMC2O95347 1197 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 MYL6BP14649 208 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 TERF2Q15554 542 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 ERCC6LQ2NKX8 1250 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 THEMISQ8N1K5 641 aaPredicted RBP13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 ADCY9O60503 1353 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 RESTQ13127 1097 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 STX1AQ16623 288 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 C1orf141Q5JVX7 400 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 ISM2Q6H9L7 571 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 LRRN4CLQ8ND94 238 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 KCNB2Q92953 911 aa13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 MORC2Q9Y6X9 1032 aaPredicted RBP13.58□□□□□ -0.24
UBE2L3-202ENST00000458578 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 SLFNL1Q499Z3 407 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 RBM43Q6ZSC3 357 aaKnown RBP13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 CHST3Q7LGC8 479 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 ERC1Q8IUD2 1116 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 IP6K1Q92551 441 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 CFAP45Q9UL16 551 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 NALCNQ8IZF0 1738 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 DBF4Q9UBU7 674 aaPredicted RBP13.57□□□□□ -0.24
UBE2L3-202ENST00000458578 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms