RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 RNF20Q5VTR2 975 aa24.64■■□□□ 1.54
CRAT-207ENST00000458362 DCAF5Q96JK2 942 aa24.64■■□□□ 1.54
CRAT-207ENST00000458362 GLI3P10071 1580 aa24.64■■□□□ 1.53
CRAT-207ENST00000458362 LETM1O95202 739 aaPredicted RBP24.64■■□□□ 1.53
CRAT-207ENST00000458362 CHGBP05060 677 aa24.64■■□□□ 1.53
CRAT-207ENST00000458362 RABL6Q3YEC7 729 aaPredicted RBP24.64■■□□□ 1.53
CRAT-207ENST00000458362 LARP1BQ659C4 914 aaKnown RBP24.64■■□□□ 1.53
CRAT-207ENST00000458362 PKD1L3Q7Z443 1732 aa24.63■■□□□ 1.53
CRAT-207ENST00000458362 CDC37L1Q7L3B6 337 aa24.63■■□□□ 1.53
CRAT-207ENST00000458362 FMNL2Q96PY5 1086 aa24.63■■□□□ 1.53
CRAT-207ENST00000458362 GIMAP6Q6P9H5 292 aa24.63■■□□□ 1.53
CRAT-207ENST00000458362 FUCA2Q9BTY2 467 aa24.63■■□□□ 1.53
CRAT-207ENST00000458362 ALDH8A1Q9H2A2 487 aaPredicted RBP24.63■■□□□ 1.53
CRAT-207ENST00000458362 USP25Q9UHP3 1055 aa24.63■■□□□ 1.53
CRAT-207ENST00000458362 PTMAP06454 111 aaKnown RBP24.61■■□□□ 1.53
CRAT-207ENST00000458362 CSPP1Q1MSJ5 1256 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 TSGA10IPQ3SY00 556 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 FERMT3Q86UX7 667 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 ZNF609O15014 1411 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 A0A087WZG4 1122 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 CASP7P55210 303 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 USPL1Q5W0Q7 1092 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 FAM173BQ6P4H8 233 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 DBNDD2Q9BQY9 259 aa24.61■■□□□ 1.53
CRAT-207ENST00000458362 ANKRD1Q15327 319 aa24.6■■□□□ 1.53
CRAT-207ENST00000458362 CCDC129Q6ZRS4 1044 aa24.6■■□□□ 1.53
CRAT-207ENST00000458362 HMG20BQ9P0W2 317 aa24.6■■□□□ 1.53
CRAT-207ENST00000458362 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.6■■□□□ 1.53
CRAT-207ENST00000458362 ATF3P18847 181 aa24.6■■□□□ 1.53
CRAT-207ENST00000458362 TTC6Q86TZ1 520 aa24.6■■□□□ 1.53
CRAT-207ENST00000458362 MPNDQ8N594 471 aa24.6■■□□□ 1.53
CRAT-207ENST00000458362 R3HCC1Q9Y3T6 440 aaKnown RBP24.6■■□□□ 1.53
CRAT-207ENST00000458362 LAMB4A4D0S4 1761 aa24.59■■□□□ 1.53
CRAT-207ENST00000458362 DCCP43146 1447 aa24.59■■□□□ 1.53
CRAT-207ENST00000458362 CABP4P57796 275 aa24.59■■□□□ 1.53
CRAT-207ENST00000458362 STK3Q13188 491 aa24.59■■□□□ 1.53
CRAT-207ENST00000458362 SEC62Q99442 399 aaKnown RBP24.59■■□□□ 1.53
CRAT-207ENST00000458362 DNAJC2Q99543 621 aaKnown RBP24.59■■□□□ 1.53
CRAT-207ENST00000458362 TMEM94Q12767 1356 aa24.58■■□□□ 1.52
CRAT-207ENST00000458362 PLBD2Q8NHP8 589 aa24.58■■□□□ 1.52
CRAT-207ENST00000458362 STRCP1A6NGW2 1772 aa24.57■■□□□ 1.52
CRAT-207ENST00000458362 ADCY5O95622 1261 aa24.57■■□□□ 1.52
CRAT-207ENST00000458362 LMBR1LQ6UX01 489 aa24.56■■□□□ 1.52
CRAT-207ENST00000458362 HAUS7Q99871 368 aa24.56■■□□□ 1.52
CRAT-207ENST00000458362 NBPF26B4DH59 902 aa24.56■■□□□ 1.52
CRAT-207ENST00000458362 NBPF14Q5TI25 921 aa24.56■■□□□ 1.52
CRAT-207ENST00000458362 NBPF10Q6P3W6 841 aaKnown RBP24.56■■□□□ 1.52
CRAT-207ENST00000458362 NBPF15Q8N660 670 aa24.56■■□□□ 1.52
CRAT-207ENST00000458362 PDCP20941 246 aa24.55■■□□□ 1.52
CRAT-207ENST00000458362 KRT85P78386 507 aa24.55■■□□□ 1.52
CRAT-207ENST00000458362 FOXO4P98177 505 aa24.55■■□□□ 1.52
CRAT-207ENST00000458362 DDX46Q7L014 1031 aaKnown RBP24.55■■□□□ 1.52
CRAT-207ENST00000458362 CCDC9Q9Y3X0 531 aaKnown RBP24.55■■□□□ 1.52
CRAT-207ENST00000458362 RFX7Q2KHR2 1363 aa24.55■■□□□ 1.52
CRAT-207ENST00000458362 TERF1P54274 439 aa24.55■■□□□ 1.52
CRAT-207ENST00000458362 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
CRAT-207ENST00000458362 ZNF830Q96NB3 372 aaPredicted RBP24.54■■□□□ 1.52
CRAT-207ENST00000458362 LIG1P18858 919 aa24.54■■□□□ 1.52
CRAT-207ENST00000458362 JAK2O60674 1132 aa24.53■■□□□ 1.52
CRAT-207ENST00000458362 KDM4AO75164 1064 aa24.53■■□□□ 1.52
CRAT-207ENST00000458362 KRT32Q14532 448 aa24.53■■□□□ 1.52
CRAT-207ENST00000458362 NEK1Q96PY6 1258 aa24.53■■□□□ 1.52
CRAT-207ENST00000458362 CHMP3Q9Y3E7 222 aa24.53■■□□□ 1.52
CRAT-207ENST00000458362 PARP4Q9UKK3 1724 aaKnown RBP24.53■■□□□ 1.52
CRAT-207ENST00000458362 AP5Z1O43299 807 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 HSP90AA2PQ14568 343 aaPredicted RBP24.52■■□□□ 1.52
CRAT-207ENST00000458362 U3KPZ7 1027 aaPredicted RBP24.52■■□□□ 1.52
CRAT-207ENST00000458362 ELP1O95163 1332 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 H7C1W4 665 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 RRP9O43818 475 aaKnown RBP24.52■■□□□ 1.52
CRAT-207ENST00000458362 CYP21A2P08686 494 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 PDIA4P13667 645 aaKnown RBP24.52■■□□□ 1.52
CRAT-207ENST00000458362 SLFNL1Q499Z3 407 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 MCMDC2Q4G0Z9 681 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 TFIP11Q9UBB9 837 aaKnown RBP24.52■■□□□ 1.52
CRAT-207ENST00000458362 TJP1Q07157 1748 aa24.52■■□□□ 1.52
CRAT-207ENST00000458362 NUP188Q5SRE5 1749 aa24.51■■□□□ 1.51
CRAT-207ENST00000458362 TTLL7Q6ZT98 887 aa24.51■■□□□ 1.51
CRAT-207ENST00000458362 ATG9AQ7Z3C6 839 aa24.51■■□□□ 1.51
CRAT-207ENST00000458362 GTF3C6Q969F1 213 aa24.51■■□□□ 1.51
CRAT-207ENST00000458362 LAMA4Q16363 1823 aa24.51■■□□□ 1.51
CRAT-207ENST00000458362 Q6ZUG5 572 aa24.51■■□□□ 1.51
CRAT-207ENST00000458362 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
CRAT-207ENST00000458362 KLHL34Q8N239 644 aa24.5■■□□□ 1.51
CRAT-207ENST00000458362 STOX1Q6ZVD7 989 aa24.5■■□□□ 1.51
CRAT-207ENST00000458362 KBTBD3Q8NAB2 608 aa24.5■■□□□ 1.51
CRAT-207ENST00000458362 CPDO75976 1380 aa24.49■■□□□ 1.51
CRAT-207ENST00000458362 SPATA31A3Q5VYP0 1347 aa24.49■■□□□ 1.51
CRAT-207ENST00000458362 LRRC2Q9BYS8 371 aa24.49■■□□□ 1.51
CRAT-207ENST00000458362 TTC12Q9H892 705 aaPredicted RBP24.48■■□□□ 1.51
CRAT-207ENST00000458362 CAMK4Q16566 473 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 LEO1Q8WVC0 666 aaPredicted RBP24.47■■□□□ 1.51
CRAT-207ENST00000458362 SPATA32Q96LK8 384 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 NEUROD6Q96NK8 337 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 SH3TC1Q8TE82 1336 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 GOLIM4O00461 696 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 CCDC192P0DO97 292 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 TIMM10P62072 90 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 BRF1Q92994 677 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms