RNA–Protein interactions for RNA: ENST00000457754.6

RUFY4-203, Transcript of RUN and FYVE domain containing 4, humanhuman

TSL 2

Gene RUFY4, Length 3,568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-203ENST00000457754 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
RUFY4-203ENST00000457754 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
RUFY4-203ENST00000457754 FUCA2Q9BTY2 467 aa12.18□□□□□ -0.46
RUFY4-203ENST00000457754 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
RUFY4-203ENST00000457754 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 USP27XA6NNY8 438 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 CCT2P78371 535 aaKnown RBP12.17□□□□□ -0.46
RUFY4-203ENST00000457754 ST3GAL1Q11201 340 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 CEP135Q66GS9 1140 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 ISM2Q6H9L7 571 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 BRF1Q92994 677 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 TLR7Q9NYK1 1049 aaKnown RBP12.17□□□□□ -0.46
RUFY4-203ENST00000457754 ATP7BP35670 1465 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 DLG5Q8TDM6 1919 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 ZNF75DP51815 510 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 CCDC129Q6ZRS4 1044 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 MAP3K2Q9Y2U5 619 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 A0A0D9SFI3 127 aa12.17□□□□□ -0.46
RUFY4-203ENST00000457754 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
RUFY4-203ENST00000457754 MYO5BQ9ULV0 1848 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 PDCP20941 246 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 HSP90AB4PQ58FF6 505 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 BIN1O00499 593 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
RUFY4-203ENST00000457754 SKILP12757 684 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 PTPN14Q15678 1187 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
RUFY4-203ENST00000457754 SSH2Q76I76 1423 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 SLC27A2O14975 620 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 PSMA5P28066 241 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 GTF2F1P35269 517 aaKnown RBP eCLIP12.15□□□□□ -0.46
RUFY4-203ENST00000457754 RNF20Q5VTR2 975 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
RUFY4-203ENST00000457754 NFATC2IPQ8NCF5 419 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 SCAND2PQ9GZW5 306 aaPredicted RBP12.15□□□□□ -0.46
RUFY4-203ENST00000457754 ZNF215Q9UL58 517 aaPredicted RBP12.15□□□□□ -0.46
RUFY4-203ENST00000457754 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 ME1P48163 572 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 IP6K1Q92551 441 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 ATP5J2-PTCD1G3V325 749 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 TAF3Q5VWG9 929 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 SDF4Q9BRK5 362 aa12.15□□□□□ -0.46
RUFY4-203ENST00000457754 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.15□□□□□ -0.46
RUFY4-203ENST00000457754 SMC2O95347 1197 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 ELF2Q15723 593 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 TMX1Q9H3N1 280 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 ST7Q9NRC1 585 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 REREQ9P2R6 1566 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
RUFY4-203ENST00000457754 PROSER3Q2NL68 480 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
RUFY4-203ENST00000457754 ZNF589Q86UQ0 364 aaPredicted RBP12.14□□□□□ -0.47
RUFY4-203ENST00000457754 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 EAF2Q96CJ1 260 aaPredicted RBP12.14□□□□□ -0.47
RUFY4-203ENST00000457754 NEUROD6Q96NK8 337 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
RUFY4-203ENST00000457754 USP6P35125 1406 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 CCDC73Q6ZRK6 1079 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
RUFY4-203ENST00000457754 KIF20BQ96Q89 1820 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 SF3A1Q15459 793 aaKnown RBP12.13□□□□□ -0.47
RUFY4-203ENST00000457754 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 SBNO1A3KN83 1393 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 CCDC69A6NI79 296 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 KINO60870 393 aaKnown RBP12.13□□□□□ -0.47
RUFY4-203ENST00000457754 CCAR1Q8IX12 1150 aaKnown RBP12.13□□□□□ -0.47
RUFY4-203ENST00000457754 STK11IPQ8N1F8 1099 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
RUFY4-203ENST00000457754 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
RUFY4-203ENST00000457754 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 Q6ZUG5 572 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
RUFY4-203ENST00000457754 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
RUFY4-203ENST00000457754 NECTIN1Q15223 517 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 TEX2Q8IWB9 1127 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 GTF3C6Q969F1 213 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 CLSTN2Q9H4D0 955 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 OGFRQ9NZT2 677 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 OTUD7BQ6GQQ9 843 aa12.12□□□□□ -0.47
RUFY4-203ENST00000457754 DDX46Q7L014 1031 aaKnown RBP12.12□□□□□ -0.47
RUFY4-203ENST00000457754 POLA2Q14181 598 aa12.11□□□□□ -0.47
RUFY4-203ENST00000457754 ANKRD7Q92527 254 aa12.11□□□□□ -0.47
RUFY4-203ENST00000457754 MYD88Q99836 296 aa12.11□□□□□ -0.47
RUFY4-203ENST00000457754 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
RUFY4-203ENST00000457754 AOX1Q06278 1338 aa12.11□□□□□ -0.47
RUFY4-203ENST00000457754 PREX1Q8TCU6 1659 aa12.11□□□□□ -0.47
RUFY4-203ENST00000457754 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
RUFY4-203ENST00000457754 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms