RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 FMNL2Q96PY5 1086 aa22.1■■□□□ 1.13
SF3B4-202ENST00000457312 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
SF3B4-202ENST00000457312 CFHR5Q9BXR6 569 aa22.1■■□□□ 1.13
SF3B4-202ENST00000457312 R3HDMLQ9H3Y0 253 aa22.1■■□□□ 1.13
SF3B4-202ENST00000457312 KIAA2012Q0VF49 1180 aa22.09■■□□□ 1.13
SF3B4-202ENST00000457312 MTHFSDQ2M296 383 aaKnown RBP22.09■■□□□ 1.13
SF3B4-202ENST00000457312 TRIM17Q9Y577 477 aa22.09■■□□□ 1.13
SF3B4-202ENST00000457312 OTOP1Q7RTM1 612 aa22.08■■□□□ 1.13
SF3B4-202ENST00000457312 SUPT20HQ8NEM7 779 aa22.08■■□□□ 1.13
SF3B4-202ENST00000457312 ZBTB12Q9Y330 459 aaPredicted RBP22.08■■□□□ 1.13
SF3B4-202ENST00000457312 TM4SF4P48230 202 aa22.07■■□□□ 1.12
SF3B4-202ENST00000457312 DPF2Q92785 391 aa22.07■■□□□ 1.12
SF3B4-202ENST00000457312 ARMC5Q96C12 935 aa22.07■■□□□ 1.12
SF3B4-202ENST00000457312 RBM17Q96I25 401 aaKnown RBP22.07■■□□□ 1.12
SF3B4-202ENST00000457312 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
SF3B4-202ENST00000457312 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
SF3B4-202ENST00000457312 HLFQ16534 295 aa22.06■■□□□ 1.12
SF3B4-202ENST00000457312 GGA3Q9NZ52 723 aa22.06■■□□□ 1.12
SF3B4-202ENST00000457312 ATP6V0A2Q9Y487 856 aa22.06■■□□□ 1.12
SF3B4-202ENST00000457312 SULF1Q8IWU6 871 aa22.05■■□□□ 1.12
SF3B4-202ENST00000457312 NYXQ9GZU5 481 aa22.05■■□□□ 1.12
SF3B4-202ENST00000457312 USP16Q9Y5T5 823 aa22.05■■□□□ 1.12
SF3B4-202ENST00000457312 FKBP1BP68106 108 aa22.04■■□□□ 1.12
SF3B4-202ENST00000457312 ASTN2O75129 1339 aaPredicted RBP22.04■■□□□ 1.12
SF3B4-202ENST00000457312 IBTKQ9P2D0 1353 aaPredicted RBP22.03■■□□□ 1.12
SF3B4-202ENST00000457312 KDM3BQ7LBC6 1761 aa22.03■■□□□ 1.12
SF3B4-202ENST00000457312 C3orf67Q6ZVT6 689 aa22.03■■□□□ 1.12
SF3B4-202ENST00000457312 ZNF609O15014 1411 aa22.03■■□□□ 1.12
SF3B4-202ENST00000457312 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
SF3B4-202ENST00000457312 KCNQ3O43525 872 aa22.02■■□□□ 1.12
SF3B4-202ENST00000457312 TEFQ10587 303 aa22.02■■□□□ 1.12
SF3B4-202ENST00000457312 PSMD14O00487 310 aa22.01■■□□□ 1.11
SF3B4-202ENST00000457312 HMOX1P09601 288 aa22.01■■□□□ 1.11
SF3B4-202ENST00000457312 RBM26Q5T8P6 1007 aaKnown RBP22.01■■□□□ 1.11
SF3B4-202ENST00000457312 DPP8Q6V1X1 898 aaPredicted RBP22.01■■□□□ 1.11
SF3B4-202ENST00000457312 MOB2Q70IA6 237 aa22.01■■□□□ 1.11
SF3B4-202ENST00000457312 COL25A1Q9BXS0 654 aaPredicted RBP22.01■■□□□ 1.11
SF3B4-202ENST00000457312 LAMB2P55268 1798 aa22.01■■□□□ 1.11
SF3B4-202ENST00000457312 NBPF26B4DH59 902 aa22■■□□□ 1.11
SF3B4-202ENST00000457312 KIF4BQ2VIQ3 1234 aa22■■□□□ 1.11
SF3B4-202ENST00000457312 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
SF3B4-202ENST00000457312 TMX4Q9H1E5 349 aaPredicted RBP22■■□□□ 1.11
SF3B4-202ENST00000457312 PRO3102Q9H379 93 aa22■■□□□ 1.11
SF3B4-202ENST00000457312 PTPN22Q9Y2R2 807 aa22■■□□□ 1.11
SF3B4-202ENST00000457312 IL17REQ8NFR9 667 aa21.99■■□□□ 1.11
SF3B4-202ENST00000457312 LRRC37AA6NMS7 1700 aa21.99■■□□□ 1.11
SF3B4-202ENST00000457312 SCN9AQ15858 1988 aa21.98■■□□□ 1.11
SF3B4-202ENST00000457312 LAMB1P07942 1786 aa21.98■■□□□ 1.11
SF3B4-202ENST00000457312 SREBF2Q12772 1141 aa21.98■■□□□ 1.11
SF3B4-202ENST00000457312 ABCC4O15439 1325 aa21.98■■□□□ 1.11
SF3B4-202ENST00000457312 LAMB4A4D0S4 1761 aa21.97■■□□□ 1.11
SF3B4-202ENST00000457312 MKRN3Q13064 507 aaKnown RBP21.97■■□□□ 1.11
SF3B4-202ENST00000457312 MPNDQ8N594 471 aa21.97■■□□□ 1.11
SF3B4-202ENST00000457312 UBN2Q6ZU65 1347 aa21.97■■□□□ 1.11
SF3B4-202ENST00000457312 SOX1O00570 391 aaPredicted RBP21.96■■□□□ 1.11
SF3B4-202ENST00000457312 RPS12P25398 132 aaKnown RBP21.96■■□□□ 1.11
SF3B4-202ENST00000457312 ZNF333Q96JL9 665 aa21.96■■□□□ 1.11
SF3B4-202ENST00000457312 TMEM106CQ9BVX2 250 aa21.96■■□□□ 1.11
SF3B4-202ENST00000457312 ANKRD36CQ5JPF3 1778 aa21.96■■□□□ 1.11
SF3B4-202ENST00000457312 TAF1P21675 1872 aa21.96■■□□□ 1.11
SF3B4-202ENST00000457312 VCANP13611 3396 aa21.95■■□□□ 1.1
SF3B4-202ENST00000457312 UBE2Q2LH0YL09 131 aa21.95■■□□□ 1.1
SF3B4-202ENST00000457312 RTL9Q8NET4 1388 aa21.94■■□□□ 1.1
SF3B4-202ENST00000457312 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
SF3B4-202ENST00000457312 ANGEL2Q5VTE6 544 aaKnown RBP21.92■■□□□ 1.1
SF3B4-202ENST00000457312 SP8Q8IXZ3 490 aa21.92■■□□□ 1.1
SF3B4-202ENST00000457312 LRCH3Q96II8 777 aa21.92■■□□□ 1.1
SF3B4-202ENST00000457312 NTSR2O95665 410 aa21.91■■□□□ 1.1
SF3B4-202ENST00000457312 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
SF3B4-202ENST00000457312 DBNDD1Q9H9R9 158 aa21.91■■□□□ 1.1
SF3B4-202ENST00000457312 ALDH1A1P00352 501 aa21.9■■□□□ 1.1
SF3B4-202ENST00000457312 GPTP24298 496 aa21.9■■□□□ 1.1
SF3B4-202ENST00000457312 CD99L2Q8TCZ2 262 aa21.9■■□□□ 1.1
SF3B4-202ENST00000457312 ERO1AQ96HE7 468 aa21.9■■□□□ 1.1
SF3B4-202ENST00000457312 BTBD11A6QL63 1104 aa21.89■■□□□ 1.09
SF3B4-202ENST00000457312 GNAT3A8MTJ3 354 aa21.89■■□□□ 1.09
SF3B4-202ENST00000457312 SNRPA1P09661 255 aaKnown RBP21.89■■□□□ 1.09
SF3B4-202ENST00000457312 CAP1Q01518 475 aa21.89■■□□□ 1.09
SF3B4-202ENST00000457312 PSME4Q14997 1843 aa21.89■■□□□ 1.09
SF3B4-202ENST00000457312 SPTBN5Q9NRC6 3674 aaKnown RBP21.88■■□□□ 1.09
SF3B4-202ENST00000457312 ERVV-1B6SEH8 477 aa21.87■■□□□ 1.09
SF3B4-202ENST00000457312 MORC1Q86VD1 984 aa21.87■■□□□ 1.09
SF3B4-202ENST00000457312 EFCC1Q9HA90 598 aa21.87■■□□□ 1.09
SF3B4-202ENST00000457312 KCNQ5Q9NR82 932 aa21.87■■□□□ 1.09
SF3B4-202ENST00000457312 MAP3K15Q6ZN16 1313 aa21.86■■□□□ 1.09
SF3B4-202ENST00000457312 BBOX1O75936 387 aa21.86■■□□□ 1.09
SF3B4-202ENST00000457312 SCARF1Q14162 830 aa21.86■■□□□ 1.09
SF3B4-202ENST00000457312 SLC4A8Q2Y0W8 1093 aa21.86■■□□□ 1.09
SF3B4-202ENST00000457312 NLRP3Q96P20 1036 aa21.86■■□□□ 1.09
SF3B4-202ENST00000457312 A0A1W2PPC1 479 aa21.85■■□□□ 1.09
SF3B4-202ENST00000457312 SCAF8Q9UPN6 1271 aaKnown RBP21.85■■□□□ 1.09
SF3B4-202ENST00000457312 ECE2O60344 883 aa21.84■■□□□ 1.09
SF3B4-202ENST00000457312 TTLL12Q14166 644 aaPredicted RBP21.84■■□□□ 1.09
SF3B4-202ENST00000457312 IFNL1Q8IU54 200 aa21.84■■□□□ 1.09
SF3B4-202ENST00000457312 PRAMEF18Q5VWM3 479 aa21.83■■□□□ 1.09
SF3B4-202ENST00000457312 SPRYD7Q5W111 196 aa21.83■■□□□ 1.09
SF3B4-202ENST00000457312 GAS2L2Q8NHY3 880 aa21.83■■□□□ 1.09
SF3B4-202ENST00000457312 DPF3Q92784 378 aa21.83■■□□□ 1.09
SF3B4-202ENST00000457312 ZNF646O15015 1829 aaPredicted RBP21.83■■□□□ 1.08
SF3B4-202ENST00000457312 ZNF280AP59817 542 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms