RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 NOL7Q9UMY1 257 aaKnown RBP16.47■□□□□ 0.23
SYT1-204ENST00000457153 ADGRL3Q9HAR2 1447 aa16.47■□□□□ 0.23
SYT1-204ENST00000457153 NEMFO60524 1076 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 IDH1O75874 414 aaKnown RBP16.46■□□□□ 0.23
SYT1-204ENST00000457153 CRB1P82279 1406 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 PTPRUQ92729 1446 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 SHPRHQ149N8 1683 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 SLC27A2O14975 620 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 POLA2Q14181 598 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 PAG1Q9NWQ8 432 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 DACH1Q9UI36 760 aa16.46■□□□□ 0.23
SYT1-204ENST00000457153 TFCP2Q12800 502 aa16.46■□□□□ 0.22
SYT1-204ENST00000457153 TSR1Q2NL82 804 aaKnown RBP16.46■□□□□ 0.22
SYT1-204ENST00000457153 CBFA2T2O43439 604 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 Q6ZUG5 572 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 ZNF165P49910 485 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
SYT1-204ENST00000457153 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
SYT1-204ENST00000457153 PRIMPOLQ96LW4 560 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 KCNQ3O43525 872 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
SYT1-204ENST00000457153 STX1AQ16623 288 aa16.45■□□□□ 0.22
SYT1-204ENST00000457153 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.45■□□□□ 0.22
SYT1-204ENST00000457153 CCDC112Q8NEF3 446 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 TCEANC2Q96MN5 208 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 KIF2CQ99661 725 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 SLC3A2P08195 630 aaKnown RBP16.44■□□□□ 0.22
SYT1-204ENST00000457153 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 RRP12Q5JTH9 1297 aaKnown RBP16.44■□□□□ 0.22
SYT1-204ENST00000457153 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
SYT1-204ENST00000457153 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
SYT1-204ENST00000457153 TMEM63CQ9P1W3 806 aa16.44■□□□□ 0.22
SYT1-204ENST00000457153 CCT2P78371 535 aaKnown RBP16.43■□□□□ 0.22
SYT1-204ENST00000457153 GAS2L3Q86XJ1 694 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 KIF2AO00139 706 aaPredicted RBP16.43■□□□□ 0.22
SYT1-204ENST00000457153 DYNC1I1O14576 645 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
SYT1-204ENST00000457153 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 ATP5JP18859 108 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 PKP1Q13835 747 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 LSG1Q9H089 658 aaKnown RBP16.43■□□□□ 0.22
SYT1-204ENST00000457153 PDCL3Q9H2J4 239 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
SYT1-204ENST00000457153 CPA1P15085 419 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 TDO2P48775 406 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 FSIP1Q8NA03 581 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
SYT1-204ENST00000457153 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 CCDC196A0A1B0GTZ2 297 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
SYT1-204ENST00000457153 LLPHQ9BRT6 129 aaKnown RBP16.42■□□□□ 0.22
SYT1-204ENST00000457153 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
SYT1-204ENST00000457153 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 ARGLU1Q9NWB6 273 aaPredicted RBP16.42■□□□□ 0.22
SYT1-204ENST00000457153 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
SYT1-204ENST00000457153 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 CCAR1Q8IX12 1150 aaKnown RBP16.41■□□□□ 0.22
SYT1-204ENST00000457153 CLIP2Q9UDT6 1046 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 SLC5A1P13866 664 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 CREBRFQ8IUR6 639 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 NAPBQ9H115 298 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 KDM4AO75164 1064 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 SERPINC1P01008 464 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 CCDC191Q8NCU4 936 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
SYT1-204ENST00000457153 IL2RBP14784 551 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
SYT1-204ENST00000457153 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
SYT1-204ENST00000457153 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
SYT1-204ENST00000457153 TERF1P54274 439 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 CEP131Q9UPN4 1083 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 MTX1Q13505 466 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
SYT1-204ENST00000457153 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
SYT1-204ENST00000457153 EYA2O00167 538 aa16.4■□□□□ 0.22
SYT1-204ENST00000457153 PHKG2P15735 406 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms